Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2999

Experiment: A22 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.005 mg/ml
3,188,176	-		Psest_2997	0.76	-2.2
3,188,176	-		Psest_2997	0.76	+0.8
3,188,193	+		Psest_2997	0.77	-0.5
3,188,194	-		Psest_2997	0.78	-1.4
3,188,194	-		Psest_2997	0.78	+0.3
3,188,355	+				-1.3
3,188,361	+				-1.1
3,188,361	+				+1.7
3,188,361	+				+1.4
3,188,361	+				-0.1
3,188,362	-				-0.7
3,188,362	-				-2.1
3,188,365	+				-0.7
3,188,365	+				-1.4
3,188,365	+				-1.9
3,188,366	-				-0.4
3,188,366	-				-1.6
3,188,415	+				-0.4
3,188,415	+				-1.9
3,188,415	+				-2.2
3,188,415	+				+1.4
3,188,415	+				+0.4
3,188,415	+				+0.0
3,188,416	-				-0.8
3,188,416	-				-0.4
3,188,416	-				-0.6
3,188,416	-				-0.7
3,188,416	-				-0.1
3,188,416	-				-0.9
3,188,416	-				+0.5
3,188,416	-				-0.5
3,188,416	-				-1.1
3,188,416	-				-0.6
3,188,419	-				-0.9
3,188,427	+				-0.5
3,188,427	+				-0.3
3,188,467	-				+1.3
3,188,476	-				-1.2
3,188,476	-				+1.5
3,188,480	+				-0.7
3,188,480	+				+1.3
3,188,480	+				-1.6
3,188,480	+				-0.2
3,188,480	+				-2.1
3,188,480	+				-0.4
3,188,481	-				-0.6
3,188,481	-				-0.8
3,188,491	+				+1.0
3,188,491	+				-1.6
3,188,491	+				-1.2
3,188,491	+				-0.2
3,188,491	+				+0.4
3,188,492	-				-0.6
3,188,492	-				-0.2
3,188,492	-				+0.1
3,188,626	+		Psest_2998	0.19	-2.5
3,188,626	+		Psest_2998	0.19	-1.3
3,188,626	+		Psest_2998	0.19	+0.7
3,188,626	+		Psest_2998	0.19	-0.3
3,188,626	+		Psest_2998	0.19	-0.9
3,188,626	+		Psest_2998	0.19	+1.8
3,188,626	+		Psest_2998	0.19	-0.0
3,188,626	+		Psest_2998	0.19	+0.4
3,188,626	+		Psest_2998	0.19	+0.6
3,188,626	+		Psest_2998	0.19	-2.9
3,188,626	+		Psest_2998	0.19	+0.2
3,188,626	+		Psest_2998	0.19	+0.6
3,188,626	+		Psest_2998	0.19	-0.5
3,188,626	+		Psest_2998	0.19	+3.2
3,188,626	+		Psest_2998	0.19	+0.2
3,188,627	-		Psest_2998	0.19	-0.0
3,188,627	-		Psest_2998	0.19	+0.3
3,188,627	-		Psest_2998	0.19	+0.1
3,188,627	-		Psest_2998	0.19	-1.9
3,188,627	-		Psest_2998	0.19	+0.1
3,188,627	-		Psest_2998	0.19	+0.7
3,188,627	-		Psest_2998	0.19	-0.3
3,188,627	-		Psest_2998	0.19	+0.9
3,188,627	-		Psest_2998	0.19	+1.4
3,188,627	-		Psest_2998	0.19	+0.3
3,188,627	-		Psest_2998	0.19	+0.1
3,188,627	-		Psest_2998	0.19	+0.1
3,188,627	-		Psest_2998	0.19	+0.2
3,188,627	-		Psest_2998	0.19	-0.7
3,188,627	-		Psest_2998	0.19	-2.6
3,188,627	-		Psest_2998	0.19	+1.2
3,188,627	-		Psest_2998	0.19	-0.5
3,188,627	-		Psest_2998	0.19	-1.0
3,188,627	-		Psest_2998	0.19	-2.3
3,188,743	+		Psest_2998	0.40	-1.8
3,188,744	-		Psest_2998	0.40	-2.1
3,188,752	+		Psest_2998	0.42	+0.4
3,188,753	-		Psest_2998	0.42	-0.9
3,188,842	+		Psest_2998	0.58	+0.6
3,188,852	-		Psest_2998	0.60	-1.4
3,188,910	+		Psest_2998	0.70	-1.2
3,188,910	+		Psest_2998	0.70	+0.9
3,188,911	-		Psest_2998	0.71	-0.8
3,189,066	-				+0.8
3,189,066	-				-1.4
3,189,103	+				+1.7
3,189,181	+				-0.7
3,189,181	+				-0.4
3,189,181	+				-1.6
3,189,181	+				+0.8
3,189,255	-		Psest_2999	0.14	-1.9
3,189,296	+		Psest_2999	0.19	-0.8
3,189,296	+		Psest_2999	0.19	+0.2
3,189,296	+		Psest_2999	0.19	+1.8
3,189,409	+		Psest_2999	0.33	-0.2
3,189,520	+		Psest_2999	0.46	-1.7
3,189,520	+		Psest_2999	0.46	-1.3
3,189,520	+		Psest_2999	0.46	+0.6
3,189,520	+		Psest_2999	0.46	-0.9
3,189,520	+		Psest_2999	0.46	-1.5
3,189,521	-		Psest_2999	0.46	+0.3
3,189,521	-		Psest_2999	0.46	-0.9
3,189,521	-		Psest_2999	0.46	+0.4
3,189,521	-		Psest_2999	0.46	-0.7
3,189,733	+		Psest_2999	0.71	-0.4
3,189,976	+				-0.9
3,189,977	-				+0.7
3,190,099	+		Psest_3000	0.17	-0.9
3,190,175	+		Psest_3000	0.28	+0.1
3,190,175	+		Psest_3000	0.28	+0.9
3,190,176	-		Psest_3000	0.28	+0.1
3,190,176	-		Psest_3000	0.28	-1.7
3,190,176	-		Psest_3000	0.28	+0.3
3,190,176	-		Psest_3000	0.28	-0.2
3,190,286	+		Psest_3000	0.44	-0.9
3,190,286	+		Psest_3000	0.44	-0.2
3,190,286	+		Psest_3000	0.44	+1.5
3,190,286	+		Psest_3000	0.44	-1.7
3,190,287	-		Psest_3000	0.45	-1.2
3,190,287	-		Psest_3000	0.45	+2.0
3,190,287	-		Psest_3000	0.45	+1.6
3,190,368	+				+2.8
3,190,538	+		Psest_3000	0.81	+1.4
3,190,538	+		Psest_3000	0.81	-0.2
3,190,538	+		Psest_3000	0.81	+0.4
3,190,538	+		Psest_3000	0.81	-1.1
3,190,538	+		Psest_3000	0.81	+0.3
3,190,538	+		Psest_3000	0.81	-1.2
3,190,539	-		Psest_3000	0.82	+2.5
3,190,539	-		Psest_3000	0.82	+0.9
3,190,539	-		Psest_3000	0.82	-0.2
3,190,539	-		Psest_3000	0.82	+0.7
3,190,563	-		Psest_3000	0.85	-0.4
3,190,629	-				-0.6
3,190,921	+		Psest_3001	0.24	-0.6
3,190,922	-		Psest_3001	0.24	-0.9