Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2964

Experiment: A22 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.005 mg/ml
3,159,146	+		Psest_2962	0.87	-0.2
3,159,146	+		Psest_2962	0.87	-0.5
3,159,146	+		Psest_2962	0.87	+0.3
3,159,147	-		Psest_2962	0.87	+0.7
3,159,147	-		Psest_2962	0.87	+1.4
3,159,149	+		Psest_2962	0.87	+0.9
3,159,150	-		Psest_2962	0.87	+0.1
3,159,237	+				+0.9
3,159,237	+				+0.1
3,159,238	-				-1.2
3,159,301	+				+0.6
3,159,302	-				+1.4
3,159,302	-				+1.8
3,159,303	+				+0.4
3,159,303	+				-1.5
3,159,303	+				+2.7
3,159,303	+				+0.1
3,159,303	+				+0.8
3,159,303	+				-0.2
3,159,303	+				+0.2
3,159,304	-				-0.3
3,159,304	-				+1.6
3,159,304	-				-0.2
3,159,304	-				-0.2
3,159,304	-				+0.1
3,159,304	-				-1.5
3,159,304	-				-0.2
3,159,304	-				+0.2
3,159,466	+		Psest_2963	0.18	-0.9
3,159,466	+		Psest_2963	0.18	+0.8
3,159,467	-		Psest_2963	0.18	+1.9
3,159,753	+		Psest_2963	0.55	-0.6
3,159,753	+		Psest_2963	0.55	+0.8
3,159,767	+		Psest_2963	0.57	+0.4
3,159,790	+		Psest_2963	0.60	-0.6
3,159,790	+		Psest_2963	0.60	+2.2
3,159,791	-		Psest_2963	0.60	-0.1
3,159,972	-		Psest_2963	0.83	-0.4
3,160,021	+		Psest_2963	0.89	-0.3
3,160,021	+		Psest_2963	0.89	+1.5
3,160,021	+		Psest_2963	0.89	-1.9
3,160,021	+		Psest_2963	0.89	+1.6
3,160,021	+		Psest_2963	0.89	+2.1
3,160,022	-		Psest_2963	0.89	+0.4
3,160,022	-		Psest_2963	0.89	+0.9
3,160,022	-		Psest_2963	0.89	-0.2
3,160,022	-		Psest_2963	0.89	+1.2
3,160,022	-		Psest_2963	0.89	+0.4
3,160,022	-		Psest_2963	0.89	+1.2
3,160,145	-				-1.0
3,160,145	-				+0.3
3,160,206	+				+0.1
3,160,207	-				+1.6
3,160,207	-				-1.0
3,160,207	-				+2.0
3,160,207	-				-1.2
3,160,302	+		Psest_2964	0.21	-1.2
3,160,303	-		Psest_2964	0.22	-0.6
3,160,565	+		Psest_2964	0.57	+0.4
3,160,588	+		Psest_2964	0.60	-1.6
3,160,589	-		Psest_2964	0.60	+1.0
3,160,589	-		Psest_2964	0.60	+0.2
3,160,589	-		Psest_2964	0.60	+0.7
3,160,640	+		Psest_2964	0.67	-0.7
3,160,717	+		Psest_2964	0.77	+2.5
3,160,717	+		Psest_2964	0.77	+2.2
3,160,717	+		Psest_2964	0.77	+1.0
3,160,718	-		Psest_2964	0.78	+0.9
3,160,798	-		Psest_2964	0.88	-0.1
3,160,798	-		Psest_2964	0.88	+1.0
3,160,798	-		Psest_2964	0.88	+1.2
3,160,867	+				-0.4
3,160,867	+				+0.2
3,160,867	+				+1.3
3,160,867	+				+0.6
3,160,867	+				+0.4
3,160,868	-				+1.4
3,160,868	-				+2.8
3,160,868	-				-0.6
3,160,868	-				-0.2
3,160,868	-				+0.1
3,160,868	-				+0.4
3,161,000	-				+2.7
3,161,077	+				-0.6
3,161,080	+				+1.0
3,161,091	+				+0.7
3,161,091	+				+1.6
3,161,091	+				+2.2
3,161,092	-				+0.6
3,161,092	-				+1.3
3,161,092	-				+2.4
3,161,092	-				+0.8
3,161,146	+				+2.4
3,161,146	+				-0.2
3,161,151	-				+1.2
3,161,151	-				+0.3
3,161,440	+		Psest_2965	0.23	-0.0
3,161,440	+		Psest_2965	0.23	+1.7
3,161,440	+		Psest_2965	0.23	-0.2
3,161,441	-		Psest_2965	0.23	+1.1
3,161,441	-		Psest_2965	0.23	+0.3
3,161,483	-		Psest_2965	0.25	-0.8
3,161,628	-		Psest_2965	0.35	+0.9
3,161,673	-		Psest_2965	0.37	+0.2
3,161,722	+		Psest_2965	0.41	-0.0
3,161,722	+		Psest_2965	0.41	+0.4
3,161,722	+		Psest_2965	0.41	+1.1
3,161,723	-		Psest_2965	0.41	+0.1
3,161,723	-		Psest_2965	0.41	+1.0
3,161,723	-		Psest_2965	0.41	+0.3
3,161,776	-		Psest_2965	0.44	-0.4
3,161,776	-		Psest_2965	0.44	-0.6
3,161,792	+		Psest_2965	0.45	+0.2
3,161,792	+		Psest_2965	0.45	-0.8
3,161,792	+		Psest_2965	0.45	+0.8
3,161,792	+		Psest_2965	0.45	+0.8
3,161,792	+		Psest_2965	0.45	+3.3
3,161,792	+		Psest_2965	0.45	-0.4
3,161,793	-		Psest_2965	0.45	+1.7
3,161,793	-		Psest_2965	0.45	+0.8
3,161,793	-		Psest_2965	0.45	+0.5
3,161,793	-		Psest_2965	0.45	+3.7
3,161,793	-		Psest_2965	0.45	-0.9
3,161,793	-		Psest_2965	0.45	+0.6
3,161,793	-		Psest_2965	0.45	-0.3
3,161,815	+		Psest_2965	0.46	-0.2
3,161,815	+		Psest_2965	0.46	+0.6
3,161,815	+		Psest_2965	0.46	-0.2
3,161,816	-		Psest_2965	0.46	-1.4
3,161,837	+		Psest_2965	0.48	+1.3
3,161,838	-		Psest_2965	0.48	-1.1
3,161,838	-		Psest_2965	0.48	+2.0
3,161,851	+		Psest_2965	0.49	-1.3
3,161,851	+		Psest_2965	0.49	+0.6
3,161,851	+		Psest_2965	0.49	+1.4
3,161,851	+		Psest_2965	0.49	+1.1
3,161,851	+		Psest_2965	0.49	-0.8
3,161,851	+		Psest_2965	0.49	+0.4
3,161,852	-		Psest_2965	0.49	+0.5
3,161,852	-		Psest_2965	0.49	+2.3
3,161,852	-		Psest_2965	0.49	-0.1
3,161,852	-		Psest_2965	0.49	+1.4
3,161,852	-		Psest_2965	0.49	+0.2
3,161,852	-		Psest_2965	0.49	+0.7
3,161,852	-		Psest_2965	0.49	+0.4
3,161,852	-		Psest_2965	0.49	+0.6
3,161,879	-		Psest_2965	0.50	-0.7
3,161,879	-		Psest_2965	0.50	+2.1