Experiment: A22 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2784 and Psest_2785 are separated by 91 nucleotides Psest_2785 and Psest_2786 are separated by 172 nucleotides Psest_2786 and Psest_2787 are separated by 52 nucleotides Psest_2787 and Psest_2788 are separated by 121 nucleotides
Psest_2784: Psest_2784 - Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family, at 2,978,873 to 2,979,676
_2784
Psest_2785: Psest_2785 - hypothetical protein, at 2,979,768 to 2,979,902
_2785
Psest_2786: Psest_2786 - Domain of unknown function (DUF3597)., at 2,980,075 to 2,980,470
_2786
Psest_2787: Psest_2787 - Protein of unknown function (DUF2789)., at 2,980,523 to 2,980,759
_2787
Psest_2788: Psest_2788 - Phosphoglycerate dehydrogenase and related dehydrogenases, at 2,980,881 to 2,981,813
_2788
Position (kb)
2980
2981 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2979.084 kb on + strand, within Psest_2784 at 2979.084 kb on + strand, within Psest_2784 at 2979.084 kb on + strand, within Psest_2784 at 2979.084 kb on + strand, within Psest_2784 at 2979.084 kb on + strand, within Psest_2784 at 2979.084 kb on + strand, within Psest_2784 at 2979.084 kb on + strand, within Psest_2784 at 2979.084 kb on + strand, within Psest_2784 at 2979.084 kb on + strand, within Psest_2784 at 2979.084 kb on + strand, within Psest_2784 at 2979.084 kb on + strand, within Psest_2784 at 2979.085 kb on - strand, within Psest_2784 at 2979.085 kb on - strand, within Psest_2784 at 2979.085 kb on - strand, within Psest_2784 at 2979.085 kb on - strand, within Psest_2784 at 2979.085 kb on - strand, within Psest_2784 at 2979.085 kb on - strand, within Psest_2784 at 2979.085 kb on - strand, within Psest_2784 at 2979.085 kb on - strand, within Psest_2784 at 2979.085 kb on - strand, within Psest_2784 at 2979.085 kb on - strand, within Psest_2784 at 2979.085 kb on - strand, within Psest_2784 at 2979.085 kb on - strand, within Psest_2784 at 2979.085 kb on - strand, within Psest_2784 at 2979.085 kb on - strand, within Psest_2784 at 2979.085 kb on - strand, within Psest_2784 at 2979.085 kb on - strand, within Psest_2784 at 2979.085 kb on - strand, within Psest_2784 at 2979.094 kb on + strand, within Psest_2784 at 2979.094 kb on + strand, within Psest_2784 at 2979.094 kb on + strand, within Psest_2784 at 2979.094 kb on + strand, within Psest_2784 at 2979.095 kb on - strand, within Psest_2784 at 2979.095 kb on - strand, within Psest_2784 at 2979.095 kb on - strand, within Psest_2784 at 2979.095 kb on - strand, within Psest_2784 at 2979.095 kb on - strand, within Psest_2784 at 2979.095 kb on - strand, within Psest_2784 at 2979.095 kb on - strand, within Psest_2784 at 2979.095 kb on - strand, within Psest_2784 at 2979.095 kb on - strand, within Psest_2784 at 2979.095 kb on - strand, within Psest_2784 at 2979.095 kb on - strand, within Psest_2784 at 2979.258 kb on + strand, within Psest_2784 at 2979.394 kb on + strand, within Psest_2784 at 2979.709 kb on + strand at 2979.934 kb on + strand at 2979.934 kb on + strand at 2979.934 kb on + strand at 2979.934 kb on + strand at 2979.935 kb on - strand at 2979.935 kb on - strand at 2979.935 kb on - strand at 2979.935 kb on - strand at 2979.935 kb on - strand at 2979.935 kb on - strand at 2979.935 kb on - strand at 2979.935 kb on - strand at 2979.935 kb on - strand at 2980.033 kb on + strand at 2980.034 kb on - strand at 2980.034 kb on - strand at 2980.149 kb on + strand, within Psest_2786 at 2980.747 kb on + strand at 2980.747 kb on + strand at 2980.747 kb on + strand at 2980.748 kb on - strand at 2980.751 kb on + strand at 2980.752 kb on - strand at 2980.752 kb on - strand at 2980.752 kb on - strand at 2980.815 kb on + strand at 2980.846 kb on + strand at 2980.847 kb on - strand at 2980.888 kb on + strand at 2980.888 kb on + strand at 2980.888 kb on + strand at 2980.888 kb on + strand at 2980.888 kb on + strand at 2980.888 kb on + strand at 2980.888 kb on + strand at 2980.888 kb on + strand at 2980.889 kb on - strand at 2980.889 kb on - strand at 2980.889 kb on - strand at 2980.889 kb on - strand at 2980.889 kb on - strand at 2980.889 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.005 mg/ml remove 2,979,084 + Psest_2784 0.26 +3.4 2,979,084 + Psest_2784 0.26 +1.1 2,979,084 + Psest_2784 0.26 +0.2 2,979,084 + Psest_2784 0.26 -0.0 2,979,084 + Psest_2784 0.26 -0.6 2,979,084 + Psest_2784 0.26 -0.9 2,979,084 + Psest_2784 0.26 +0.2 2,979,084 + Psest_2784 0.26 -1.3 2,979,084 + Psest_2784 0.26 -1.8 2,979,084 + Psest_2784 0.26 -2.7 2,979,084 + Psest_2784 0.26 +2.8 2,979,085 - Psest_2784 0.26 +0.8 2,979,085 - Psest_2784 0.26 +3.3 2,979,085 - Psest_2784 0.26 -1.5 2,979,085 - Psest_2784 0.26 -0.5 2,979,085 - Psest_2784 0.26 +2.3 2,979,085 - Psest_2784 0.26 -0.5 2,979,085 - Psest_2784 0.26 +0.9 2,979,085 - Psest_2784 0.26 -0.2 2,979,085 - Psest_2784 0.26 +1.2 2,979,085 - Psest_2784 0.26 -1.3 2,979,085 - Psest_2784 0.26 +0.7 2,979,085 - Psest_2784 0.26 -0.8 2,979,085 - Psest_2784 0.26 +0.4 2,979,085 - Psest_2784 0.26 +1.2 2,979,085 - Psest_2784 0.26 +0.1 2,979,085 - Psest_2784 0.26 +0.0 2,979,085 - Psest_2784 0.26 +0.0 2,979,094 + Psest_2784 0.27 -1.0 2,979,094 + Psest_2784 0.27 -0.0 2,979,094 + Psest_2784 0.27 -0.4 2,979,094 + Psest_2784 0.27 -0.3 2,979,095 - Psest_2784 0.28 +0.4 2,979,095 - Psest_2784 0.28 +0.9 2,979,095 - Psest_2784 0.28 -0.3 2,979,095 - Psest_2784 0.28 +0.1 2,979,095 - Psest_2784 0.28 +0.2 2,979,095 - Psest_2784 0.28 +1.8 2,979,095 - Psest_2784 0.28 +1.5 2,979,095 - Psest_2784 0.28 +0.8 2,979,095 - Psest_2784 0.28 -2.8 2,979,095 - Psest_2784 0.28 +0.9 2,979,095 - Psest_2784 0.28 -1.1 2,979,258 + Psest_2784 0.48 -1.5 2,979,394 + Psest_2784 0.65 +0.3 2,979,709 + -0.7 2,979,934 + -1.6 2,979,934 + +1.7 2,979,934 + -0.2 2,979,934 + -0.7 2,979,935 - -0.0 2,979,935 - -0.3 2,979,935 - +0.4 2,979,935 - +1.2 2,979,935 - -1.3 2,979,935 - -0.3 2,979,935 - +1.9 2,979,935 - +1.7 2,979,935 - -0.2 2,980,033 + +0.1 2,980,034 - -0.9 2,980,034 - +1.2 2,980,149 + Psest_2786 0.19 +1.3 2,980,747 + -1.6 2,980,747 + +0.8 2,980,747 + -2.0 2,980,748 - +0.7 2,980,751 + -0.3 2,980,752 - -0.2 2,980,752 - +2.2 2,980,752 - +2.9 2,980,815 + +1.1 2,980,846 + -0.4 2,980,847 - -0.1 2,980,888 + -0.0 2,980,888 + -1.8 2,980,888 + -0.6 2,980,888 + -0.8 2,980,888 + -0.3 2,980,888 + -0.3 2,980,888 + -0.5 2,980,888 + +0.3 2,980,889 - -0.6 2,980,889 - -1.5 2,980,889 - +0.7 2,980,889 - -1.3 2,980,889 - +1.2 2,980,889 - +1.1
Or see this region's nucleotide sequence