Experiment: A22 0.005 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2755 and Psest_2756 are separated by 93 nucleotides Psest_2756 and Psest_2757 are separated by 138 nucleotides Psest_2757 and Psest_2758 are separated by 132 nucleotides Psest_2758 and Psest_2759 are separated by 62 nucleotides
Psest_2755: Psest_2755 - Gluconolactonase, at 2,944,614 to 2,945,705
_2755
Psest_2756: Psest_2756 - hypothetical protein, at 2,945,799 to 2,945,921
_2756
Psest_2757: Psest_2757 - hypothetical protein, at 2,946,060 to 2,946,209
_2757
Psest_2758: Psest_2758 - Predicted transcriptional regulators, at 2,946,342 to 2,946,743
_2758
Psest_2759: Psest_2759 - Co/Zn/Cd efflux system component, at 2,946,806 to 2,947,453
_2759
Position (kb)
2945
2946 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2944.881 kb on + strand, within Psest_2755 at 2945.100 kb on + strand, within Psest_2755 at 2945.100 kb on + strand, within Psest_2755 at 2945.100 kb on + strand, within Psest_2755 at 2945.101 kb on - strand, within Psest_2755 at 2945.101 kb on - strand, within Psest_2755 at 2945.193 kb on + strand, within Psest_2755 at 2945.196 kb on + strand, within Psest_2755 at 2945.196 kb on + strand, within Psest_2755 at 2945.196 kb on + strand, within Psest_2755 at 2945.196 kb on + strand, within Psest_2755 at 2945.334 kb on + strand, within Psest_2755 at 2945.334 kb on + strand, within Psest_2755 at 2945.334 kb on + strand, within Psest_2755 at 2945.334 kb on + strand, within Psest_2755 at 2945.334 kb on + strand, within Psest_2755 at 2945.334 kb on + strand, within Psest_2755 at 2945.335 kb on - strand, within Psest_2755 at 2945.335 kb on - strand, within Psest_2755 at 2945.335 kb on - strand, within Psest_2755 at 2945.335 kb on - strand, within Psest_2755 at 2945.335 kb on - strand, within Psest_2755 at 2945.335 kb on - strand, within Psest_2755 at 2945.335 kb on - strand, within Psest_2755 at 2945.379 kb on + strand, within Psest_2755 at 2945.379 kb on + strand, within Psest_2755 at 2945.379 kb on + strand, within Psest_2755 at 2945.379 kb on + strand, within Psest_2755 at 2945.379 kb on + strand, within Psest_2755 at 2945.379 kb on + strand, within Psest_2755 at 2945.664 kb on + strand at 2945.664 kb on + strand at 2945.665 kb on - strand at 2945.665 kb on - strand at 2945.673 kb on + strand at 2945.673 kb on + strand at 2945.674 kb on - strand at 2945.800 kb on + strand at 2945.800 kb on + strand at 2945.801 kb on - strand at 2945.801 kb on - strand at 2945.801 kb on - strand at 2945.901 kb on + strand, within Psest_2756 at 2945.901 kb on + strand, within Psest_2756 at 2945.961 kb on - strand at 2945.987 kb on + strand at 2946.152 kb on - strand, within Psest_2757 at 2946.161 kb on - strand, within Psest_2757 at 2946.292 kb on + strand at 2946.292 kb on + strand at 2946.293 kb on - strand at 2946.293 kb on - strand at 2946.343 kb on + strand at 2946.343 kb on + strand at 2946.344 kb on - strand at 2946.487 kb on - strand, within Psest_2758 at 2946.679 kb on + strand, within Psest_2758 at 2946.679 kb on + strand, within Psest_2758 at 2946.679 kb on + strand, within Psest_2758 at 2946.682 kb on + strand, within Psest_2758 at 2946.757 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction A22 0.005 mg/ml remove 2,944,881 + Psest_2755 0.24 -2.2 2,945,100 + Psest_2755 0.45 -1.2 2,945,100 + Psest_2755 0.45 +0.6 2,945,100 + Psest_2755 0.45 -1.5 2,945,101 - Psest_2755 0.45 -0.2 2,945,101 - Psest_2755 0.45 +1.7 2,945,193 + Psest_2755 0.53 +0.1 2,945,196 + Psest_2755 0.53 -0.2 2,945,196 + Psest_2755 0.53 +0.8 2,945,196 + Psest_2755 0.53 -0.9 2,945,196 + Psest_2755 0.53 -0.2 2,945,334 + Psest_2755 0.66 -2.1 2,945,334 + Psest_2755 0.66 -0.8 2,945,334 + Psest_2755 0.66 -0.1 2,945,334 + Psest_2755 0.66 -0.5 2,945,334 + Psest_2755 0.66 -2.6 2,945,334 + Psest_2755 0.66 -2.3 2,945,335 - Psest_2755 0.66 -1.1 2,945,335 - Psest_2755 0.66 -0.7 2,945,335 - Psest_2755 0.66 -0.9 2,945,335 - Psest_2755 0.66 -1.4 2,945,335 - Psest_2755 0.66 +0.4 2,945,335 - Psest_2755 0.66 -0.4 2,945,335 - Psest_2755 0.66 +1.3 2,945,379 + Psest_2755 0.70 -1.2 2,945,379 + Psest_2755 0.70 +0.7 2,945,379 + Psest_2755 0.70 -1.8 2,945,379 + Psest_2755 0.70 +0.4 2,945,379 + Psest_2755 0.70 +0.0 2,945,379 + Psest_2755 0.70 -0.7 2,945,664 + +1.2 2,945,664 + +1.4 2,945,665 - +1.1 2,945,665 - -1.0 2,945,673 + +0.1 2,945,673 + +2.3 2,945,674 - +0.8 2,945,800 + +0.5 2,945,800 + -1.2 2,945,801 - -0.9 2,945,801 - +0.0 2,945,801 - -0.9 2,945,901 + Psest_2756 0.83 +1.4 2,945,901 + Psest_2756 0.83 -0.1 2,945,961 - -1.5 2,945,987 + +0.2 2,946,152 - Psest_2757 0.61 -1.0 2,946,161 - Psest_2757 0.67 -0.4 2,946,292 + -0.4 2,946,292 + -0.1 2,946,293 - -0.1 2,946,293 - -1.5 2,946,343 + -0.8 2,946,343 + -0.6 2,946,344 - -0.1 2,946,487 - Psest_2758 0.36 -0.7 2,946,679 + Psest_2758 0.84 -1.4 2,946,679 + Psest_2758 0.84 -0.3 2,946,679 + Psest_2758 0.84 -1.2 2,946,682 + Psest_2758 0.85 -0.5 2,946,757 - +1.1
Or see this region's nucleotide sequence