Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1933

Experiment: A22 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.005 mg/ml
2,044,801	+		Psest_1932	0.50	+0.2
2,044,802	-		Psest_1932	0.50	-0.9
2,044,802	-		Psest_1932	0.50	+1.8
2,045,102	-		Psest_1932	0.75	+0.1
2,045,118	+		Psest_1932	0.76	-0.3
2,045,217	+		Psest_1932	0.84	-0.1
2,045,217	+		Psest_1932	0.84	+0.4
2,045,217	+		Psest_1932	0.84	+0.5
2,045,220	+		Psest_1932	0.85	+1.1
2,045,220	+		Psest_1932	0.85	+1.0
2,045,221	-		Psest_1932	0.85	-1.8
2,045,347	+				+0.1
2,045,348	-				-0.3
2,045,399	+				-0.1
2,045,428	+				-3.0
2,045,428	+				-1.8
2,045,429	-				+3.4
2,045,429	-				+1.0
2,045,577	+				+0.2
2,045,577	+				-0.0
2,045,577	+				+0.7
2,045,578	-				+1.2
2,045,578	-				+0.5
2,045,585	-				+1.6
2,045,738	-				-0.3
2,045,763	+				+1.9
2,045,764	-				+1.7
2,046,168	+		Psest_1933	0.42	+1.4
2,046,168	+		Psest_1933	0.42	-0.6
2,046,168	+		Psest_1933	0.42	-1.2
2,046,169	-		Psest_1933	0.43	+2.8
2,046,169	-		Psest_1933	0.43	+0.9
2,046,226	+		Psest_1933	0.49	+1.9
2,046,227	-		Psest_1933	0.49	+0.2
2,046,315	+		Psest_1933	0.58	-0.1
2,046,465	+		Psest_1933	0.74	-0.6
2,046,465	+		Psest_1933	0.74	+1.9
2,046,465	+		Psest_1933	0.74	-0.1
2,046,466	-		Psest_1933	0.74	+0.0
2,046,466	-		Psest_1933	0.74	-0.3
2,046,466	-		Psest_1933	0.74	+0.3
2,046,466	-		Psest_1933	0.74	+0.8
2,046,466	-		Psest_1933	0.74	+0.8
2,046,466	-		Psest_1933	0.74	-0.2
2,046,466	-		Psest_1933	0.74	-0.1
2,046,472	-		Psest_1933	0.75	+2.5
2,046,652	+				+0.0
2,046,652	+				+0.3
2,046,652	+				+1.7
2,046,705	+				+0.4
2,046,706	-				+0.4
2,046,778	-		Psest_1934	0.17	+1.3
2,046,784	-		Psest_1934	0.18	-2.2
2,046,784	-		Psest_1934	0.18	+0.5
2,046,864	+		Psest_1934	0.36	+0.3
2,046,865	-		Psest_1934	0.36	-1.7
2,046,929	-		Psest_1934	0.51	+0.9
2,046,929	-		Psest_1934	0.51	+0.5
2,046,929	-		Psest_1934	0.51	+2.5
2,046,930	+		Psest_1934	0.51	+1.3
2,046,930	+		Psest_1934	0.51	-0.6
2,046,930	+		Psest_1934	0.51	+1.7
2,046,930	+		Psest_1934	0.51	+3.4
2,046,930	+		Psest_1934	0.51	+0.3
2,046,930	+		Psest_1934	0.51	+1.0
2,046,931	-		Psest_1934	0.51	-0.7
2,046,931	-		Psest_1934	0.51	+0.4
2,046,931	-		Psest_1934	0.51	-2.8
2,046,931	-		Psest_1934	0.51	-1.2
2,047,001	+		Psest_1934	0.67	+0.1
2,047,001	+		Psest_1934	0.67	-0.8
2,047,001	+		Psest_1934	0.67	+0.3
2,047,001	+		Psest_1934	0.67	-0.4
2,047,002	-		Psest_1934	0.67	+0.3
2,047,002	-		Psest_1934	0.67	+1.0
2,047,030	+		Psest_1934	0.73	-1.3
2,047,030	+		Psest_1934	0.73	+0.2
2,047,182	+				+0.5
2,047,183	-				-1.1
2,047,183	-				+1.2
2,047,588	-		Psest_1935	0.38	+0.5
2,047,679	+		Psest_1935	0.51	+1.4
2,047,679	+		Psest_1935	0.51	-0.7
2,047,680	-		Psest_1935	0.51	+0.1
2,047,680	-		Psest_1935	0.51	+0.1
2,047,680	-		Psest_1935	0.51	-0.3
2,047,680	-		Psest_1935	0.51	-1.2
2,047,683	+		Psest_1935	0.52	-0.2
2,047,683	+		Psest_1935	0.52	+1.1
2,047,683	+		Psest_1935	0.52	+0.3
2,047,683	+		Psest_1935	0.52	+0.9
2,047,683	+		Psest_1935	0.52	-0.2
2,047,683	+		Psest_1935	0.52	-1.3
2,047,683	+		Psest_1935	0.52	-1.3
2,047,684	-		Psest_1935	0.52	+1.2
2,047,684	-		Psest_1935	0.52	-1.7
2,047,684	-		Psest_1935	0.52	-1.1
2,047,684	-		Psest_1935	0.52	+1.0
2,047,684	-		Psest_1935	0.52	+1.0
2,047,684	-		Psest_1935	0.52	-2.1
2,047,684	-		Psest_1935	0.52	-0.5
2,047,684	-		Psest_1935	0.52	-0.7
2,047,684	-		Psest_1935	0.52	-0.2
2,047,684	-		Psest_1935	0.52	+0.6
2,047,684	-		Psest_1935	0.52	-1.3
2,047,684	-		Psest_1935	0.52	+0.7
2,047,684	-		Psest_1935	0.52	-1.5
2,047,684	-		Psest_1935	0.52	-0.1