Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1840

Experiment: A22 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.005 mg/ml
1,943,281	-				-1.3
1,943,359	+				+1.0
1,943,359	+				+1.1
1,943,359	+				+1.3
1,943,407	+				+0.3
1,943,407	+				+0.8
1,943,407	+				+1.2
1,943,407	+				+1.0
1,943,407	+				+1.3
1,943,407	+				+0.2
1,943,407	+				+0.9
1,943,407	+				+0.8
1,943,407	+				+0.9
1,943,407	+				+0.8
1,943,408	-				+0.8
1,943,408	-				+0.8
1,943,408	-				+0.5
1,943,408	-				+0.9
1,943,408	-				+0.4
1,943,408	-				+0.2
1,943,408	-				+0.8
1,943,440	+				+1.2
1,943,440	+				+1.0
1,943,440	+				+0.8
1,943,440	+				+1.3
1,943,440	+				+1.6
1,943,440	+				+1.2
1,943,441	-				+1.3
1,943,441	-				+0.4
1,943,557	+		Psest_1840	0.14	+1.2
1,943,557	+		Psest_1840	0.14	+0.9
1,943,558	-		Psest_1840	0.14	+0.8
1,943,558	-		Psest_1840	0.14	+0.7
1,943,770	+		Psest_1840	0.29	+1.4
1,943,770	+		Psest_1840	0.29	+1.2
1,943,770	+		Psest_1840	0.29	+1.2
1,943,770	+		Psest_1840	0.29	+2.2
1,943,770	+		Psest_1840	0.29	+1.0
1,943,810	+		Psest_1840	0.32	+1.3
1,943,810	+		Psest_1840	0.32	+0.8
1,943,810	+		Psest_1840	0.32	+1.2
1,943,811	-		Psest_1840	0.32	+0.8
1,943,812	+		Psest_1840	0.32	+1.3
1,943,813	-		Psest_1840	0.32	+0.8
1,943,813	-		Psest_1840	0.32	+1.1
1,943,819	-		Psest_1840	0.32	+0.8
1,944,093	+		Psest_1840	0.52	+1.1
1,944,093	+		Psest_1840	0.52	+1.2
1,944,289	+		Psest_1840	0.65	+1.1
1,944,289	+		Psest_1840	0.65	+1.0
1,944,289	+		Psest_1840	0.65	+1.0
1,944,289	+		Psest_1840	0.65	+0.9
1,944,303	+		Psest_1840	0.66	+0.8
1,944,303	+		Psest_1840	0.66	+1.4
1,944,303	+		Psest_1840	0.66	+1.0
1,944,304	-		Psest_1840	0.66	+0.0
1,944,306	-		Psest_1840	0.67	+1.8
1,944,568	+		Psest_1840	0.85	+1.1
1,944,568	+		Psest_1840	0.85	+0.6
1,944,568	+		Psest_1840	0.85	+1.0
1,944,568	+		Psest_1840	0.85	+1.3
1,944,568	+		Psest_1840	0.85	+0.2
1,944,568	+		Psest_1840	0.85	+1.0
1,944,568	+		Psest_1840	0.85	+1.0
1,944,568	+		Psest_1840	0.85	+1.1
1,944,568	+		Psest_1840	0.85	+1.0
1,944,569	-		Psest_1840	0.85	+1.0
1,944,569	-		Psest_1840	0.85	+1.1
1,944,569	-		Psest_1840	0.85	+1.1
1,944,569	-		Psest_1840	0.85	+1.2
1,944,569	-		Psest_1840	0.85	+1.1
1,944,619	-		Psest_1840	0.89	+1.2
1,944,702	+				+1.0
1,944,702	+				+1.2
1,944,702	+				+0.7
1,944,727	+				+0.1
1,944,727	+				-0.3
1,944,728	-				+1.1
1,944,728	-				+0.8
1,944,751	+				+1.0
1,944,751	+				+0.8
1,944,751	+				+1.2
1,944,751	+				+1.3
1,944,751	+				+1.1
1,944,752	-				+1.0
1,944,752	-				+1.0
1,944,752	-				+1.3
1,944,752	-				+1.3
1,944,752	-				+0.7
1,944,774	+				+0.5
1,944,775	-				+1.3
1,944,782	+				+0.8
1,944,782	+				+0.8
1,944,782	+				+1.0
1,944,782	+				+0.8
1,944,782	+				+1.0
1,944,782	+				+1.2
1,944,782	+				+1.0
1,944,782	+				+1.0
1,944,782	+				+1.1
1,944,783	-				+1.1
1,944,783	-				+0.8
1,944,783	-				+0.6
1,944,783	-				+0.9
1,944,783	-				+1.0
1,944,783	-				+1.5
1,944,783	-				+0.8
1,944,783	-				+1.1
1,944,783	-				+1.1
1,944,783	-				+0.7
1,944,783	-				+1.3
1,944,783	-				+1.2
1,944,783	-				+0.8
1,944,783	-				+0.2
1,944,826	+				+1.2
1,944,826	+				+1.2
1,944,826	+				+1.1
1,944,827	-				+0.7
1,944,923	+				+0.2
1,944,973	+				-0.4
1,945,123	+				-0.6
1,945,124	-				-0.6
1,945,495	+		Psest_1841	0.37	+1.1
1,945,495	+		Psest_1841	0.37	+2.0
1,945,495	+		Psest_1841	0.37	-0.0
1,945,495	+		Psest_1841	0.37	-2.0
1,945,495	+		Psest_1841	0.37	-1.9
1,945,495	+		Psest_1841	0.37	+3.4
1,945,496	-		Psest_1841	0.37	-0.0
1,945,496	-		Psest_1841	0.37	+0.5
1,945,553	+		Psest_1841	0.43	-1.2
1,945,632	+		Psest_1841	0.52	+0.7
1,945,633	-		Psest_1841	0.52	-1.6
1,945,633	-		Psest_1841	0.52	-3.0
1,945,746	-		Psest_1841	0.64	-1.6