Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4007

Experiment: A22 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.002 mg/ml
4,179,828	-				-0.1
4,179,888	+		Psest_4006	0.17	+0.9
4,179,989	+		Psest_4006	0.31	-0.2
4,179,989	+		Psest_4006	0.31	-0.3
4,179,989	+		Psest_4006	0.31	-0.4
4,179,990	-		Psest_4006	0.31	-1.7
4,180,089	-		Psest_4006	0.45	+1.1
4,180,089	-		Psest_4006	0.45	+0.2
4,180,231	+		Psest_4006	0.65	+0.2
4,180,231	+		Psest_4006	0.65	+1.2
4,180,231	+		Psest_4006	0.65	-1.3
4,180,232	-		Psest_4006	0.65	-1.0
4,180,232	-		Psest_4006	0.65	-1.2
4,180,232	-		Psest_4006	0.65	-0.6
4,180,400	+		Psest_4006	0.88	-2.3
4,180,401	-		Psest_4006	0.89	+0.9
4,180,401	-		Psest_4006	0.89	-0.3
4,180,401	-		Psest_4006	0.89	+1.2
4,180,401	-		Psest_4006	0.89	+0.9
4,180,537	+				-0.9
4,180,537	+				-0.3
4,180,538	-				+0.8
4,180,538	-				-1.9
4,180,539	+				+1.4
4,180,539	+				-1.5
4,180,540	-				-2.5
4,180,540	-				+1.6
4,180,540	-				-1.5
4,180,540	-				-1.5
4,180,540	-				-0.5
4,180,540	-				-1.2
4,180,670	-				+1.8
4,180,670	-				-1.0
4,180,884	+		Psest_4007	0.11	+1.7
4,180,920	+		Psest_4007	0.14	+0.5
4,180,921	-		Psest_4007	0.14	+2.2
4,181,079	+		Psest_4007	0.24	-0.6
4,181,079	+		Psest_4007	0.24	-1.0
4,181,079	+		Psest_4007	0.24	-0.6
4,181,080	-		Psest_4007	0.24	+1.8
4,181,080	-		Psest_4007	0.24	+1.4
4,181,200	+		Psest_4007	0.31	+2.0
4,181,201	-		Psest_4007	0.31	-1.1
4,181,201	-		Psest_4007	0.31	+1.4
4,181,201	-		Psest_4007	0.31	+0.9
4,181,342	-		Psest_4007	0.40	+1.7
4,181,342	-		Psest_4007	0.40	-0.5
4,181,342	-		Psest_4007	0.40	-0.9
4,181,646	+		Psest_4007	0.59	+1.4
4,181,646	+		Psest_4007	0.59	-0.5
4,181,646	+		Psest_4007	0.59	+0.9
4,181,646	+		Psest_4007	0.59	+1.0
4,181,646	+		Psest_4007	0.59	-0.2
4,181,647	-		Psest_4007	0.59	-1.2
4,181,647	-		Psest_4007	0.59	+0.6
4,181,647	-		Psest_4007	0.59	-1.0
4,181,647	-		Psest_4007	0.59	-1.8
4,181,647	-		Psest_4007	0.59	+0.6
4,181,775	-		Psest_4007	0.67	-2.1
4,181,879	+		Psest_4007	0.74	+1.2
4,181,985	+		Psest_4007	0.81	-1.4
4,181,985	+		Psest_4007	0.81	+0.6
4,181,986	-		Psest_4007	0.81	+0.6
4,181,986	-		Psest_4007	0.81	+0.9
4,182,187	-				-0.2
4,182,224	-				+0.8
4,182,224	-				+1.3
4,182,240	+				-0.1
4,182,240	+				-0.2
4,182,240	+				-2.0
4,182,240	+				-1.6
4,182,240	+				+2.2
4,182,240	+				-0.3
4,182,240	+				-0.6
4,182,240	+				-2.0
4,182,240	+				-1.1
4,182,241	-				+0.1
4,182,241	-				-0.2
4,182,241	-				+0.3
4,182,241	-				+0.4
4,182,241	-				+1.2
4,182,241	-				-0.5
4,182,308	-				+0.8
4,182,448	+				-0.3
4,182,449	-				-1.1
4,182,449	-				+0.9
4,182,449	-				-1.7
4,182,494	-				+0.9
4,182,829	+				-1.2
4,182,829	+				+0.3
4,182,829	+				+1.2
4,182,829	+				-0.1
4,182,830	-				-0.7
4,182,830	-				+1.9
4,182,830	-				+0.9
4,182,830	-				+0.9
4,183,031	-		Psest_4008	0.13	+0.9
4,183,031	-		Psest_4008	0.13	+0.5
4,183,061	-		Psest_4008	0.13	+1.3
4,183,061	-		Psest_4008	0.13	+0.8
4,183,061	-		Psest_4008	0.13	-0.0
4,183,167	+		Psest_4008	0.15	+0.8
4,183,168	-		Psest_4008	0.15	-2.5
4,183,168	-		Psest_4008	0.15	+0.6
4,183,168	-		Psest_4008	0.15	+1.0