Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2429

Experiment: A22 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.002 mg/ml
2,592,569	+				-0.9
2,592,569	+				-0.4
2,592,569	+				-0.3
2,592,569	+				-1.3
2,592,569	+				-1.4
2,592,570	-				+0.9
2,592,570	-				+0.1
2,592,570	-				+0.9
2,592,570	-				+1.2
2,592,723	+		Psest_2427	0.24	+0.9
2,592,723	+		Psest_2427	0.24	-0.3
2,592,723	+		Psest_2427	0.24	-0.5
2,592,817	+		Psest_2427	0.38	+0.2
2,592,971	+		Psest_2427	0.61	-0.1
2,592,972	-		Psest_2427	0.61	-0.2
2,593,135	+		Psest_2427	0.85	+0.0
2,593,135	+		Psest_2427	0.85	+0.9
2,593,135	+		Psest_2427	0.85	+0.5
2,593,135	+		Psest_2427	0.85	-1.7
2,593,135	+		Psest_2427	0.85	+1.9
2,593,136	-		Psest_2427	0.85	+0.9
2,593,136	-		Psest_2427	0.85	+0.5
2,593,136	-		Psest_2427	0.85	-0.1
2,593,136	-		Psest_2427	0.85	-0.7
2,593,136	-		Psest_2427	0.85	+1.5
2,593,136	-		Psest_2427	0.85	-0.3
2,593,136	-		Psest_2427	0.85	+0.2
2,593,136	-		Psest_2427	0.85	-0.2
2,593,136	-		Psest_2427	0.85	-0.1
2,593,136	-		Psest_2427	0.85	-0.6
2,593,242	+				+0.6
2,593,255	-				-0.8
2,593,255	-				+0.9
2,593,255	-				-0.5
2,593,269	+				-0.2
2,593,269	+				+0.9
2,593,269	+				+0.6
2,593,269	+				+1.1
2,593,270	-				+0.9
2,593,272	+				-0.8
2,593,272	+				+0.9
2,593,272	+				+0.3
2,593,272	+				-1.1
2,593,272	+				-0.1
2,593,273	-				+0.9
2,593,273	-				+0.5
2,593,273	-				-0.4
2,593,273	-				-0.3
2,593,273	-				+0.3
2,593,273	-				-0.1
2,593,273	-				-1.1
2,593,273	-				-0.1
2,593,273	-				+1.4
2,593,302	-		Psest_2428	0.19	+0.0
2,593,398	+		Psest_2428	0.49	+0.5
2,593,398	+		Psest_2428	0.49	-0.8
2,593,399	-		Psest_2428	0.50	-0.1
2,593,399	-		Psest_2428	0.50	+0.6
2,593,399	-		Psest_2428	0.50	+1.8
2,593,399	-		Psest_2428	0.50	-1.2
2,593,399	-		Psest_2428	0.50	+1.0
2,593,610	+				-1.8
2,593,611	-				-0.2
2,593,611	-				-0.3
2,593,611	-				-0.3
2,593,794	+		Psest_2429	0.39	-0.4
2,593,794	+		Psest_2429	0.39	-1.0
2,593,795	-		Psest_2429	0.39	-0.1
2,593,795	-		Psest_2429	0.39	-0.7
2,593,795	-		Psest_2429	0.39	+0.3
2,593,795	-		Psest_2429	0.39	-1.8
2,593,795	-		Psest_2429	0.39	-2.1
2,593,795	-		Psest_2429	0.39	+0.3
2,593,911	-		Psest_2429	0.58	-1.0
2,593,911	-		Psest_2429	0.58	-1.1
2,593,911	-		Psest_2429	0.58	-0.5
2,594,211	+				-0.7
2,594,211	+				-0.4
2,594,211	+				-1.1
2,594,211	+				-0.5
2,594,211	+				-0.7
2,594,211	+				+0.0
2,594,211	+				-0.6
2,594,211	+				+1.4
2,594,211	+				-1.5
2,594,211	+				-1.1
2,594,211	+				+0.0
2,594,211	+				-0.6
2,594,211	+				+0.9
2,594,212	-				+0.6
2,594,212	-				+1.3
2,594,212	-				+0.7
2,594,212	-				+0.5
2,594,212	-				-0.9
2,594,212	-				-0.4
2,594,212	-				+2.4
2,594,212	-				-0.3
2,594,212	-				+1.9
2,594,212	-				+0.3
2,594,212	-				-0.4
2,594,213	+				-0.5
2,594,213	+				-0.8
2,594,213	+				+0.1
2,594,213	+				-1.0
2,594,213	+				-0.3
2,594,214	-				-3.0
2,594,436	-				-1.4
2,594,536	+		Psest_2430	0.21	+1.5
2,594,656	+		Psest_2430	0.36	+1.1
2,594,656	+		Psest_2430	0.36	+0.3
2,594,657	-		Psest_2430	0.36	-2.2
2,594,657	-		Psest_2430	0.36	-0.1
2,594,657	-		Psest_2430	0.36	-0.8
2,594,746	+		Psest_2430	0.47	+0.0
2,594,905	+		Psest_2430	0.67	-0.4
2,594,905	+		Psest_2430	0.67	-1.4
2,594,905	+		Psest_2430	0.67	-0.5
2,594,905	+		Psest_2430	0.67	+0.0
2,594,905	+		Psest_2430	0.67	+0.5
2,594,906	-		Psest_2430	0.67	-0.4
2,595,030	+		Psest_2430	0.83	-3.8
2,595,030	+		Psest_2430	0.83	-0.4
2,595,031	-		Psest_2430	0.83	-0.7
2,595,045	-		Psest_2430	0.84	+0.2
2,595,045	-		Psest_2430	0.84	+0.1
2,595,058	+		Psest_2430	0.86	-0.3
2,595,059	-		Psest_2430	0.86	+0.3
2,595,059	-		Psest_2430	0.86	+1.5
2,595,059	-		Psest_2430	0.86	-0.1
2,595,062	+		Psest_2430	0.86	+2.0
2,595,062	+		Psest_2430	0.86	-2.1
2,595,063	-		Psest_2430	0.87	-0.4
2,595,100	+				+0.3
2,595,100	+				-0.9
2,595,101	-				+0.3