Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1875

Experiment: A22 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.002 mg/ml
1,984,701	+				-0.4
1,984,701	+				-1.1
1,984,701	+				+0.0
1,984,702	-				-1.3
1,984,770	+				-1.1
1,984,830	-		Psest_1874	0.13	-0.2
1,984,916	+		Psest_1874	0.24	+0.5
1,984,916	+		Psest_1874	0.24	-0.7
1,984,916	+		Psest_1874	0.24	+0.1
1,984,916	+		Psest_1874	0.24	-0.8
1,984,917	-		Psest_1874	0.24	+0.7
1,985,392	+		Psest_1874	0.87	-0.6
1,985,471	+				-1.0
1,985,471	+				-0.8
1,985,662	+				+2.0
1,985,662	+				-0.2
1,985,662	+				+1.4
1,985,663	-				+1.8
1,985,663	-				+1.3
1,985,663	-				+0.3
1,985,733	+		Psest_1875	0.11	+0.6
1,985,740	+		Psest_1875	0.12	+0.1
1,985,741	-		Psest_1875	0.12	-1.4
1,985,741	-		Psest_1875	0.12	-1.1
1,985,821	+		Psest_1875	0.17	-1.0
1,985,822	-		Psest_1875	0.17	+0.1
1,985,822	-		Psest_1875	0.17	+0.7
1,985,909	-		Psest_1875	0.23	+0.1
1,985,909	-		Psest_1875	0.23	+0.6
1,985,909	-		Psest_1875	0.23	-1.9
1,986,154	+		Psest_1875	0.39	-1.0
1,986,187	+		Psest_1875	0.41	-0.5
1,986,187	+		Psest_1875	0.41	-0.4
1,986,188	-		Psest_1875	0.41	+0.2
1,986,188	-		Psest_1875	0.41	-2.0
1,986,188	-		Psest_1875	0.41	-0.2
1,986,188	-		Psest_1875	0.41	+0.0
1,986,349	+		Psest_1875	0.52	-0.6
1,986,349	+		Psest_1875	0.52	-0.4
1,986,349	+		Psest_1875	0.52	+0.5
1,986,350	-		Psest_1875	0.52	-0.2
1,986,350	-		Psest_1875	0.52	-1.7
1,986,350	-		Psest_1875	0.52	+1.0
1,986,466	+		Psest_1875	0.60	+0.4
1,986,466	+		Psest_1875	0.60	+1.4
1,986,466	+		Psest_1875	0.60	-0.4
1,986,467	-		Psest_1875	0.60	+0.1
1,986,467	-		Psest_1875	0.60	-0.5
1,986,467	-		Psest_1875	0.60	+0.5
1,986,546	+		Psest_1875	0.65	-0.1
1,986,637	-		Psest_1875	0.71	-0.9
1,986,728	+		Psest_1875	0.77	-0.1
1,986,728	+		Psest_1875	0.77	-0.8
1,986,796	+		Psest_1875	0.82	+0.7
1,986,829	+		Psest_1875	0.84	-0.4
1,986,829	+		Psest_1875	0.84	+0.4
1,986,830	-		Psest_1875	0.84	+1.2
1,986,838	+		Psest_1875	0.85	+0.1
1,986,838	+		Psest_1875	0.85	+0.6
1,986,838	+		Psest_1875	0.85	+0.2
1,986,838	+		Psest_1875	0.85	+2.0
1,986,838	+		Psest_1875	0.85	+3.2
1,986,838	+		Psest_1875	0.85	-1.6
1,986,838	+		Psest_1875	0.85	-1.9
1,986,838	+		Psest_1875	0.85	+0.7
1,986,838	+		Psest_1875	0.85	-1.9
1,986,839	-		Psest_1875	0.85	-0.2
1,986,892	+		Psest_1875	0.88	+2.6
1,986,892	+		Psest_1875	0.88	+0.7
1,986,892	+		Psest_1875	0.88	-0.5
1,986,893	-		Psest_1875	0.88	+0.6
1,986,893	-		Psest_1875	0.88	+0.6
1,986,893	-		Psest_1875	0.88	+1.6
1,986,893	-		Psest_1875	0.88	-1.8
1,986,893	-		Psest_1875	0.88	-0.2
1,986,895	+		Psest_1875	0.88	-0.2
1,986,955	+				-0.4
1,986,955	+				-0.5
1,986,955	+				+0.7
1,986,955	+				-0.6
1,986,955	+				+1.2
1,986,955	+				-1.5
1,986,955	+				+2.6
1,986,955	+				-0.9
1,986,955	+				+0.1
1,986,955	+				+0.0
1,986,955	+				-0.3
1,986,955	+				+0.5
1,986,956	-				-1.7
1,986,956	-				+1.0
1,986,956	-				+1.3
1,986,956	-				+1.5
1,986,956	-				-1.5
1,986,956	-				-0.5
1,986,956	-				-0.8
1,986,956	-				+0.1
1,986,956	-				+0.2
1,986,961	+				+1.2
1,987,128	+				-0.5
1,987,128	+				+0.8
1,987,174	+				+1.8
1,987,188	+				-0.4
1,987,264	+		Psest_1876	0.19	-2.1
1,987,264	+		Psest_1876	0.19	+1.2
1,987,387	+		Psest_1876	0.58	-0.5
1,987,442	+		Psest_1876	0.75	+0.7
1,987,442	+		Psest_1876	0.75	-0.8
1,987,443	-		Psest_1876	0.75	-0.3
1,987,465	+		Psest_1876	0.82	+0.8
1,987,466	-		Psest_1876	0.83	-0.1
1,987,474	+		Psest_1876	0.85	+0.8
1,987,475	-		Psest_1876	0.86	+1.2
1,987,525	+				+0.5
1,987,526	-				-0.8
1,987,553	-				-1.2
1,987,600	-				+0.4
1,987,600	-				+0.5
1,987,651	+				-0.5