Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2705

Experiment: A22 0.002 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	A22 0.002 mg/ml
2,896,104	+				+0.8
2,896,194	+				+1.9
2,896,195	-				+0.3
2,896,195	-				-0.5
2,896,247	-				-0.9
2,896,247	-				+0.5
2,896,385	-				-1.2
2,896,403	-				-0.9
2,896,403	-				-0.1
2,896,403	-				+1.0
2,896,410	-				-0.9
2,896,532	+				-2.2
2,896,532	+				-0.9
2,896,532	+				-1.0
2,896,533	-				+1.5
2,896,533	-				-0.3
2,896,533	-				-0.9
2,896,533	-				+1.5
2,896,533	-				-0.9
2,896,533	-				-1.1
2,896,542	+				-0.7
2,896,542	+				+0.1
2,896,542	+				-0.5
2,896,542	+				-2.4
2,896,542	+				+0.4
2,896,542	+				+0.2
2,896,542	+				+0.8
2,896,542	+				-1.9
2,896,542	+				+2.5
2,896,542	+				-0.1
2,896,542	+				-2.1
2,896,542	+				+0.5
2,896,542	+				-0.9
2,896,543	-				-1.8
2,896,543	-				-0.1
2,896,543	-				-0.4
2,896,543	-				-0.3
2,896,543	-				+0.1
2,896,543	-				-0.5
2,896,543	-				-0.3
2,896,543	-				+1.3
2,896,543	-				-0.8
2,896,543	-				-0.8
2,896,543	-				+0.3
2,896,544	+				+1.2
2,896,544	+				+1.9
2,896,544	+				-0.2
2,896,544	+				-0.9
2,896,544	+				-0.3
2,896,544	+				+0.9
2,896,544	+				+1.3
2,896,544	+				-0.1
2,896,544	+				-0.3
2,896,544	+				+2.5
2,896,544	+				-0.1
2,896,544	+				-1.3
2,896,544	+				+0.3
2,896,545	-				+0.0
2,896,545	-				+0.3
2,896,545	-				-2.5
2,896,545	-				-0.5
2,896,545	-				+0.5
2,896,545	-				-0.3
2,896,545	-				+0.4
2,896,545	-				+0.7
2,896,545	-				-1.5
2,896,545	-				+1.5
2,896,545	-				+1.3
2,896,545	-				-2.9
2,896,545	-				+1.4
2,896,546	+				+0.1
2,896,546	+				+0.2
2,896,546	+				-0.3
2,896,546	+				+0.5
2,896,546	+				-0.9
2,896,546	+				-1.8
2,896,546	+				-0.9
2,896,547	-				+2.4
2,896,547	-				+1.7
2,896,867	+				+1.6
2,896,885	-				-0.6
2,896,969	+				-0.8
2,896,973	+				-0.1
2,896,973	+				-0.6
2,896,973	+				+0.9
2,896,974	-				-0.8
2,896,974	-				-1.7
2,896,989	+				-0.6
2,896,990	-				+1.0
2,897,017	-				-0.8
2,897,017	-				+0.6
2,897,017	-				+0.0
2,897,113	+		Psest_2705	0.13	-0.8
2,897,114	-		Psest_2705	0.13	-0.5
2,897,129	+		Psest_2705	0.16	-1.3
2,897,130	-		Psest_2705	0.16	-0.8
2,897,130	-		Psest_2705	0.16	-0.3
2,897,290	+		Psest_2705	0.41	+0.2
2,897,455	-		Psest_2705	0.68	-0.7
2,897,526	+		Psest_2705	0.79	+1.6
2,897,527	-		Psest_2705	0.79	+0.9
2,897,527	-		Psest_2705	0.79	-0.1
2,897,527	-		Psest_2705	0.79	-0.5
2,897,541	+		Psest_2705	0.81	-1.1
2,897,541	+		Psest_2705	0.81	-1.6
2,897,579	+		Psest_2705	0.87	-1.0
2,897,579	+		Psest_2705	0.87	-1.4
2,897,579	+		Psest_2705	0.87	-2.2
2,897,580	-		Psest_2705	0.88	-0.6
2,897,581	+		Psest_2705	0.88	+0.1
2,897,662	+				+1.7
2,897,662	+				+0.4
2,897,662	+				+0.4
2,897,663	-				+0.5
2,897,663	-				+1.7
2,897,663	-				-0.2
2,897,689	+				-1.0
2,897,708	+				+0.9
2,897,709	-				-1.0
2,897,719	+				+0.6
2,897,719	+				+0.1
2,897,739	-				+0.2
2,897,746	-				-0.8
2,897,773	+				-0.0
2,897,773	+				-0.1
2,897,837	-				+0.5
2,897,837	-				+0.8
2,897,879	-				-1.4
2,898,115	+				+0.5
2,898,181	+				+0.5
2,898,181	+				+0.1
2,898,181	+				-0.0
2,898,181	+				-0.0
2,898,182	-				-0.1
2,898,182	-				+0.9
2,898,182	-				+2.0
2,898,182	-				-1.0
2,898,182	-				+1.0
2,898,274	+				+0.9
2,898,274	+				-0.5
2,898,274	+				+0.2
2,898,275	-				+1.8
2,898,275	-				+0.9
2,898,275	-				-0.9
2,898,275	-				-0.6
2,898,310	+		Psest_2706	0.13	+1.5
2,898,310	+		Psest_2706	0.13	-0.4
2,898,310	+		Psest_2706	0.13	-2.1
2,898,311	-		Psest_2706	0.13	+0.6
2,898,311	-		Psest_2706	0.13	-1.0
2,898,311	-		Psest_2706	0.13	+0.2
2,898,640	+		Psest_2706	0.46	+1.0
2,898,640	+		Psest_2706	0.46	-0.3
2,898,640	+		Psest_2706	0.46	-0.7
2,898,640	+		Psest_2706	0.46	-0.5
2,898,641	-		Psest_2706	0.46	+1.5