Experiment: Vancomycin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3661 and Psest_3662 are separated by 7 nucleotides Psest_3662 and Psest_3663 are separated by 1 nucleotides Psest_3663 and Psest_3664 overlap by 4 nucleotides
Psest_3661: Psest_3661 - Protein of unknown function (DUF3530)., at 3,823,712 to 3,824,725
_3661
Psest_3662: Psest_3662 - DnaJ-domain-containing proteins 1, at 3,824,733 to 3,825,500
_3662
Psest_3663: Psest_3663 - Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon), at 3,825,502 to 3,826,173
_3663
Psest_3664: Psest_3664 - Predicted phosphotransferase related to Ser/Thr protein kinases, at 3,826,170 to 3,827,228
_3664
Position (kb)
3824
3825
3826 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3823.772 kb on + strand at 3823.772 kb on + strand at 3823.772 kb on + strand at 3823.773 kb on - strand at 3824.156 kb on - strand, within Psest_3661 at 3824.220 kb on + strand, within Psest_3661 at 3824.220 kb on + strand, within Psest_3661 at 3824.289 kb on + strand, within Psest_3661 at 3824.289 kb on + strand, within Psest_3661 at 3824.289 kb on + strand, within Psest_3661 at 3824.289 kb on + strand, within Psest_3661 at 3824.290 kb on - strand, within Psest_3661 at 3824.417 kb on + strand, within Psest_3661 at 3824.473 kb on + strand, within Psest_3661 at 3824.473 kb on + strand, within Psest_3661 at 3824.474 kb on - strand, within Psest_3661 at 3824.474 kb on - strand, within Psest_3661 at 3824.507 kb on + strand, within Psest_3661 at 3824.507 kb on + strand, within Psest_3661 at 3824.508 kb on - strand, within Psest_3661 at 3824.508 kb on - strand, within Psest_3661 at 3824.508 kb on - strand, within Psest_3661 at 3824.508 kb on - strand, within Psest_3661 at 3824.532 kb on + strand, within Psest_3661 at 3824.532 kb on + strand, within Psest_3661 at 3824.533 kb on - strand, within Psest_3661 at 3824.533 kb on - strand, within Psest_3661 at 3824.543 kb on + strand, within Psest_3661 at 3824.543 kb on + strand, within Psest_3661 at 3824.543 kb on + strand, within Psest_3661 at 3824.543 kb on + strand, within Psest_3661 at 3824.543 kb on + strand, within Psest_3661 at 3824.543 kb on + strand, within Psest_3661 at 3824.543 kb on + strand, within Psest_3661 at 3824.543 kb on + strand, within Psest_3661 at 3824.543 kb on + strand, within Psest_3661 at 3824.543 kb on + strand, within Psest_3661 at 3824.543 kb on + strand, within Psest_3661 at 3824.543 kb on + strand, within Psest_3661 at 3824.543 kb on + strand, within Psest_3661 at 3824.543 kb on + strand, within Psest_3661 at 3824.543 kb on + strand, within Psest_3661 at 3824.543 kb on + strand, within Psest_3661 at 3824.543 kb on + strand, within Psest_3661 at 3824.543 kb on + strand, within Psest_3661 at 3824.544 kb on - strand, within Psest_3661 at 3824.544 kb on - strand, within Psest_3661 at 3824.544 kb on - strand, within Psest_3661 at 3824.544 kb on - strand, within Psest_3661 at 3824.544 kb on - strand, within Psest_3661 at 3824.544 kb on - strand, within Psest_3661 at 3824.544 kb on - strand, within Psest_3661 at 3824.544 kb on - strand, within Psest_3661 at 3824.544 kb on - strand, within Psest_3661 at 3824.544 kb on - strand, within Psest_3661 at 3824.544 kb on - strand, within Psest_3661 at 3824.545 kb on + strand, within Psest_3661 at 3824.545 kb on + strand, within Psest_3661 at 3824.546 kb on - strand, within Psest_3661 at 3824.664 kb on - strand at 3824.711 kb on - strand at 3824.711 kb on - strand at 3824.723 kb on + strand at 3824.724 kb on - strand at 3824.858 kb on + strand, within Psest_3662 at 3824.859 kb on - strand, within Psest_3662 at 3824.859 kb on - strand, within Psest_3662 at 3824.942 kb on - strand, within Psest_3662 at 3825.267 kb on - strand, within Psest_3662 at 3825.520 kb on + strand at 3825.520 kb on + strand at 3825.521 kb on - strand at 3825.521 kb on - strand at 3825.521 kb on - strand at 3825.521 kb on - strand at 3825.521 kb on - strand at 3826.256 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Vancomycin 0.016 mg/ml remove 3,823,772 + +0.3 3,823,772 + +0.4 3,823,772 + -0.1 3,823,773 - -0.8 3,824,156 - Psest_3661 0.44 -0.4 3,824,220 + Psest_3661 0.50 -1.5 3,824,220 + Psest_3661 0.50 -0.7 3,824,289 + Psest_3661 0.57 -2.8 3,824,289 + Psest_3661 0.57 +0.9 3,824,289 + Psest_3661 0.57 +0.4 3,824,289 + Psest_3661 0.57 -2.2 3,824,290 - Psest_3661 0.57 -0.8 3,824,417 + Psest_3661 0.70 +1.5 3,824,473 + Psest_3661 0.75 -0.8 3,824,473 + Psest_3661 0.75 +0.3 3,824,474 - Psest_3661 0.75 +2.3 3,824,474 - Psest_3661 0.75 +0.6 3,824,507 + Psest_3661 0.78 -0.4 3,824,507 + Psest_3661 0.78 -0.2 3,824,508 - Psest_3661 0.79 +0.4 3,824,508 - Psest_3661 0.79 -0.5 3,824,508 - Psest_3661 0.79 +0.7 3,824,508 - Psest_3661 0.79 +0.3 3,824,532 + Psest_3661 0.81 +0.3 3,824,532 + Psest_3661 0.81 -0.6 3,824,533 - Psest_3661 0.81 -1.0 3,824,533 - Psest_3661 0.81 -2.4 3,824,543 + Psest_3661 0.82 -1.5 3,824,543 + Psest_3661 0.82 +1.0 3,824,543 + Psest_3661 0.82 -0.7 3,824,543 + Psest_3661 0.82 +0.1 3,824,543 + Psest_3661 0.82 +0.9 3,824,543 + Psest_3661 0.82 -0.5 3,824,543 + Psest_3661 0.82 -0.0 3,824,543 + Psest_3661 0.82 -0.2 3,824,543 + Psest_3661 0.82 +3.2 3,824,543 + Psest_3661 0.82 +1.1 3,824,543 + Psest_3661 0.82 -0.7 3,824,543 + Psest_3661 0.82 -2.4 3,824,543 + Psest_3661 0.82 +0.2 3,824,543 + Psest_3661 0.82 -0.4 3,824,543 + Psest_3661 0.82 -0.6 3,824,543 + Psest_3661 0.82 -0.1 3,824,543 + Psest_3661 0.82 -0.0 3,824,543 + Psest_3661 0.82 +0.5 3,824,544 - Psest_3661 0.82 +0.5 3,824,544 - Psest_3661 0.82 -1.0 3,824,544 - Psest_3661 0.82 -2.9 3,824,544 - Psest_3661 0.82 +0.7 3,824,544 - Psest_3661 0.82 -1.1 3,824,544 - Psest_3661 0.82 -0.6 3,824,544 - Psest_3661 0.82 +0.4 3,824,544 - Psest_3661 0.82 -0.6 3,824,544 - Psest_3661 0.82 -0.9 3,824,544 - Psest_3661 0.82 +2.2 3,824,544 - Psest_3661 0.82 -3.5 3,824,545 + Psest_3661 0.82 +1.0 3,824,545 + Psest_3661 0.82 +0.5 3,824,546 - Psest_3661 0.82 -0.3 3,824,664 - -2.3 3,824,711 - +1.8 3,824,711 - +0.2 3,824,723 + -1.0 3,824,724 - +2.0 3,824,858 + Psest_3662 0.16 +0.5 3,824,859 - Psest_3662 0.16 -0.5 3,824,859 - Psest_3662 0.16 -0.9 3,824,942 - Psest_3662 0.27 +2.8 3,825,267 - Psest_3662 0.70 +1.9 3,825,520 + +1.0 3,825,520 + -2.1 3,825,521 - +0.1 3,825,521 - +0.3 3,825,521 - +0.3 3,825,521 - +0.1 3,825,521 - +1.1 3,826,256 - +1.3
Or see this region's nucleotide sequence