Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3318

Experiment: Vancomycin 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.016 mg/ml
3,479,314	+		Psest_3316	0.29	-1.4
3,479,334	-		Psest_3316	0.31	-0.8
3,479,499	+		Psest_3316	0.50	+2.0
3,479,499	+		Psest_3316	0.50	+0.3
3,479,499	+		Psest_3316	0.50	-1.3
3,479,500	-		Psest_3316	0.50	-0.1
3,479,500	-		Psest_3316	0.50	+0.1
3,479,500	-		Psest_3316	0.50	+0.5
3,479,500	-		Psest_3316	0.50	-0.5
3,479,500	-		Psest_3316	0.50	-0.4
3,479,500	-		Psest_3316	0.50	+0.4
3,479,623	-		Psest_3316	0.65	+0.2
3,479,706	-		Psest_3316	0.74	+0.9
3,479,706	-		Psest_3316	0.74	-1.3
3,479,757	-		Psest_3316	0.80	-0.8
3,479,801	+		Psest_3316	0.85	-2.0
3,479,801	+		Psest_3316	0.85	+0.1
3,479,801	+		Psest_3316	0.85	+0.5
3,479,801	+		Psest_3316	0.85	-0.3
3,479,801	+		Psest_3316	0.85	-0.8
3,479,801	+		Psest_3316	0.85	-0.0
3,479,801	+		Psest_3316	0.85	-0.6
3,479,802	-		Psest_3316	0.85	-0.2
3,479,802	-		Psest_3316	0.85	+0.5
3,479,802	-		Psest_3316	0.85	-0.1
3,479,849	+				-0.0
3,479,849	+				+1.0
3,479,849	+				+0.9
3,479,850	-				-0.5
3,479,924	+				-2.2
3,479,931	-				-0.5
3,479,931	-				+1.5
3,479,931	-				+1.3
3,479,931	-				+0.4
3,479,931	-				+0.6
3,479,931	-				-0.9
3,479,931	-				+0.6
3,479,936	+				+0.6
3,479,957	+				+0.8
3,479,957	+				-0.5
3,479,957	+				-0.1
3,479,957	+				-0.4
3,479,957	+				+0.5
3,479,957	+				+0.6
3,479,957	+				-0.5
3,479,957	+				+1.1
3,479,958	-				+2.0
3,480,117	+		Psest_3317	0.64	-0.0
3,480,117	+		Psest_3317	0.64	+0.5
3,480,117	+		Psest_3317	0.64	+0.3
3,480,117	+		Psest_3317	0.64	+0.2
3,480,117	+		Psest_3317	0.64	+0.0
3,480,117	+		Psest_3317	0.64	+0.1
3,480,117	+		Psest_3317	0.64	-0.8
3,480,118	-		Psest_3317	0.65	-1.4
3,480,194	-				+0.6
3,480,194	-				-0.5
3,480,392	+				-0.2
3,480,392	+				+1.7
3,480,470	+		Psest_3318	0.15	-0.2
3,480,470	+		Psest_3318	0.15	-0.1
3,480,471	-		Psest_3318	0.15	+0.6
3,480,471	-		Psest_3318	0.15	-3.2
3,480,471	-		Psest_3318	0.15	+0.9
3,480,625	-		Psest_3318	0.27	+1.4
3,480,639	+		Psest_3318	0.28	-0.3
3,480,639	+		Psest_3318	0.28	-2.4
3,480,639	+		Psest_3318	0.28	-2.0
3,480,639	+		Psest_3318	0.28	-1.1
3,480,639	+		Psest_3318	0.28	-0.3
3,480,639	+		Psest_3318	0.28	-0.1
3,480,639	+		Psest_3318	0.28	-1.4
3,480,640	-		Psest_3318	0.28	-0.2
3,480,640	-		Psest_3318	0.28	-0.1
3,480,640	-		Psest_3318	0.28	+0.1
3,480,640	-		Psest_3318	0.28	-0.3
3,480,640	-		Psest_3318	0.28	-0.7
3,480,640	-		Psest_3318	0.28	-0.8
3,480,640	-		Psest_3318	0.28	+0.8
3,480,640	-		Psest_3318	0.28	+0.0
3,480,640	-		Psest_3318	0.28	-0.2
3,480,640	-		Psest_3318	0.28	-0.2
3,480,640	-		Psest_3318	0.28	+0.1
3,480,679	-		Psest_3318	0.31	-0.3
3,480,702	+		Psest_3318	0.32	-2.0
3,480,703	-		Psest_3318	0.32	-0.6
3,480,703	-		Psest_3318	0.32	-0.8
3,480,795	+		Psest_3318	0.39	-1.1
3,480,796	-		Psest_3318	0.39	-2.4
3,480,796	-		Psest_3318	0.39	-0.4
3,480,796	-		Psest_3318	0.39	+1.3
3,480,796	-		Psest_3318	0.39	-0.3
3,480,796	-		Psest_3318	0.39	-1.0
3,480,999	+		Psest_3318	0.54	-0.0
3,481,000	-		Psest_3318	0.54	-0.3
3,481,000	-		Psest_3318	0.54	+0.5
3,481,006	-		Psest_3318	0.55	+1.3
3,481,240	-		Psest_3318	0.72	-0.4
3,481,407	+		Psest_3318	0.85	+1.1
3,481,407	+		Psest_3318	0.85	-1.2
3,481,407	+		Psest_3318	0.85	-0.2
3,481,407	+		Psest_3318	0.85	-0.5
3,481,407	+		Psest_3318	0.85	-2.0
3,481,407	+		Psest_3318	0.85	+1.0
3,481,407	+		Psest_3318	0.85	+0.4
3,481,408	-		Psest_3318	0.85	+1.3
3,481,408	-		Psest_3318	0.85	-0.4
3,481,408	-		Psest_3318	0.85	+0.5
3,481,408	-		Psest_3318	0.85	-0.3
3,481,408	-		Psest_3318	0.85	-0.5
3,481,408	-		Psest_3318	0.85	-1.9
3,481,408	-		Psest_3318	0.85	+0.3
3,481,408	-		Psest_3318	0.85	+0.5
3,481,408	-		Psest_3318	0.85	-0.3
3,481,408	-		Psest_3318	0.85	-2.9
3,481,408	-		Psest_3318	0.85	+0.7
3,481,408	-		Psest_3318	0.85	-1.3
3,481,415	-		Psest_3318	0.85	+1.4
3,481,415	-		Psest_3318	0.85	-0.5
3,481,601	+				-1.9
3,481,601	+				+0.5
3,481,601	+				+0.3
3,481,601	+				+0.5
3,481,601	+				-1.2
3,481,601	+				+1.0
3,481,601	+				+1.2
3,481,602	-				-1.6
3,481,602	-				-3.1
3,481,602	-				-1.9
3,481,602	-				+0.0
3,481,612	+				+0.5
3,481,612	+				-1.4
3,481,613	-				-2.0
3,481,613	-				+1.2
3,481,693	-				+1.3
3,481,711	-				+1.3
3,481,920	-		Psest_3319	0.37	+1.0
3,481,935	+		Psest_3319	0.40	+1.8
3,481,935	+		Psest_3319	0.40	+1.2
3,481,935	+		Psest_3319	0.40	+0.6
3,481,936	-		Psest_3319	0.40	+0.2
3,481,936	-		Psest_3319	0.40	+0.6
3,481,936	-		Psest_3319	0.40	+0.4
3,482,016	+		Psest_3319	0.56	+0.6
3,482,205	+				+0.2
3,482,205	+				+1.4
3,482,205	+				-0.4
3,482,205	+				-1.1
3,482,205	+				-0.7
3,482,206	-				-0.2
3,482,206	-				+0.7
3,482,206	-				-0.9
3,482,206	-				+0.3
3,482,206	-				+0.2
3,482,206	-				+0.1
3,482,414	+				+0.2
3,482,414	+				+2.3
3,482,414	+				-0.7
3,482,415	-				+0.5
3,482,415	-				+0.1
3,482,415	-				-2.0
3,482,415	-				+0.8
3,482,415	-				-0.1
3,482,419	-				+0.5
3,482,419	-				+0.8
3,482,419	-				-1.1
3,482,419	-				-1.1
3,482,419	-				+1.4
3,482,419	-				+2.2
3,482,539	+		Psest_3320	0.15	+1.0
3,482,539	+		Psest_3320	0.15	+2.5
3,482,611	+		Psest_3320	0.20	-1.0
3,482,612	-		Psest_3320	0.20	-1.0
3,482,612	-		Psest_3320	0.20	-0.1
3,482,612	-		Psest_3320	0.20	+0.0
3,482,612	-		Psest_3320	0.20	+2.0