Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2538

Experiment: Vancomycin 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.016 mg/ml
2,718,153	+		Psest_2537	0.39	+1.7
2,718,154	-		Psest_2537	0.39	-0.3
2,718,154	-		Psest_2537	0.39	-0.4
2,718,254	+		Psest_2537	0.47	-0.8
2,718,254	+		Psest_2537	0.47	-1.3
2,718,254	+		Psest_2537	0.47	-1.0
2,718,254	+		Psest_2537	0.47	+0.5
2,718,254	+		Psest_2537	0.47	+0.5
2,718,255	-		Psest_2537	0.47	+0.9
2,718,255	-		Psest_2537	0.47	-0.3
2,718,255	-		Psest_2537	0.47	-1.3
2,718,255	-		Psest_2537	0.47	+0.6
2,718,255	-		Psest_2537	0.47	+0.6
2,718,255	-		Psest_2537	0.47	-2.4
2,718,255	-		Psest_2537	0.47	+2.0
2,718,255	-		Psest_2537	0.47	-2.4
2,718,255	-		Psest_2537	0.47	-0.1
2,718,255	-		Psest_2537	0.47	-0.6
2,718,345	-		Psest_2537	0.53	+0.7
2,718,345	-		Psest_2537	0.53	-0.1
2,718,345	-		Psest_2537	0.53	+0.3
2,718,384	+		Psest_2537	0.56	+0.5
2,718,385	-		Psest_2537	0.56	-2.3
2,718,385	-		Psest_2537	0.56	-1.8
2,718,421	-		Psest_2537	0.59	-1.3
2,718,421	-		Psest_2537	0.59	-0.0
2,718,421	-		Psest_2537	0.59	+1.2
2,718,470	+		Psest_2537	0.62	+0.7
2,718,626	+		Psest_2537	0.74	-0.2
2,718,648	+		Psest_2537	0.75	-1.8
2,718,816	-		Psest_2537	0.87	-0.6
2,718,816	-		Psest_2537	0.87	-2.9
2,718,947	+				-1.0
2,718,948	-				+0.0
2,718,962	-				+0.1
2,718,989	+				+1.5
2,719,028	-				-0.3
2,719,058	+				+0.6
2,719,072	-				-2.6
2,719,097	+				+0.5
2,719,097	+				-0.7
2,719,097	+				+0.7
2,719,097	+				-1.9
2,719,097	+				+1.7
2,719,097	+				+1.7
2,719,097	+				-2.1
2,719,098	-				-1.6
2,719,098	-				+0.5
2,719,098	-				-0.6
2,719,098	-				-1.1
2,719,098	-				+0.5
2,719,098	-				-0.4
2,719,098	-				-0.4
2,719,256	-		Psest_2538	0.21	+1.5
2,719,313	+		Psest_2538	0.29	+1.5
2,719,774	+				-3.0
2,719,775	-				+0.4
2,719,892	-				+0.1
2,719,940	-		Psest_2539	0.15	-0.0
2,720,145	+		Psest_2539	0.52	+0.8
2,720,145	+		Psest_2539	0.52	-0.4
2,720,293	+		Psest_2539	0.79	-0.2
2,720,294	-		Psest_2539	0.80	-0.7
2,720,432	-				+1.9
2,720,454	+				-1.3
2,720,455	-				-0.0
2,720,455	-				-3.2
2,720,567	-		Psest_2540	0.18	+0.5
2,720,567	-		Psest_2540	0.18	-0.7
2,720,663	-		Psest_2540	0.33	+0.0
2,720,702	+		Psest_2540	0.40	+0.7
2,720,728	+		Psest_2540	0.44	+0.1
2,720,770	+		Psest_2540	0.51	+1.2
2,720,820	+		Psest_2540	0.59	+0.4
2,720,820	+		Psest_2540	0.59	+0.3
2,720,820	+		Psest_2540	0.59	+0.3
2,720,821	-		Psest_2540	0.59	+0.1
2,720,821	-		Psest_2540	0.59	-1.0
2,720,821	-		Psest_2540	0.59	+0.5
2,720,821	-		Psest_2540	0.59	+0.4
2,720,821	-		Psest_2540	0.59	-1.0
2,720,821	-		Psest_2540	0.59	-0.4
2,720,829	+		Psest_2540	0.61	+0.0
2,720,830	-		Psest_2540	0.61	+0.4
2,720,830	-		Psest_2540	0.61	-1.2
2,720,830	-		Psest_2540	0.61	-2.4
2,720,830	-		Psest_2540	0.61	+2.2
2,720,830	-		Psest_2540	0.61	-1.6
2,720,830	-		Psest_2540	0.61	+0.6
2,720,830	-		Psest_2540	0.61	-0.4