Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1743

Experiment: Vancomycin 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.016 mg/ml
1,846,419	+		Psest_1741	0.80	-0.5
1,846,419	+		Psest_1741	0.80	+1.0
1,846,420	-		Psest_1741	0.80	+2.8
1,846,516	+				-0.1
1,846,516	+				-0.8
1,846,517	-				+0.9
1,846,664	+		Psest_1742	0.18	+0.0
1,846,665	-		Psest_1742	0.19	+0.6
1,846,784	+		Psest_1742	0.34	+0.5
1,846,784	+		Psest_1742	0.34	+0.5
1,846,859	+		Psest_1742	0.43	-0.8
1,846,859	+		Psest_1742	0.43	+0.6
1,846,859	+		Psest_1742	0.43	-0.8
1,846,859	+		Psest_1742	0.43	+0.1
1,846,859	+		Psest_1742	0.43	+1.4
1,846,860	-		Psest_1742	0.43	-0.5
1,846,860	-		Psest_1742	0.43	+0.2
1,846,860	-		Psest_1742	0.43	+3.2
1,846,860	-		Psest_1742	0.43	+1.7
1,846,860	-		Psest_1742	0.43	+3.9
1,846,860	-		Psest_1742	0.43	+0.8
1,846,860	-		Psest_1742	0.43	-0.8
1,846,860	-		Psest_1742	0.43	-1.5
1,846,860	-		Psest_1742	0.43	+1.8
1,846,860	-		Psest_1742	0.43	+1.6
1,846,869	-		Psest_1742	0.44	-0.7
1,846,869	-		Psest_1742	0.44	-2.2
1,846,965	-		Psest_1742	0.56	+0.7
1,846,991	-		Psest_1742	0.60	-0.1
1,847,245	+				+1.3
1,847,322	+				+0.3
1,847,390	+				+1.2
1,847,391	-				+3.2
1,848,063	+		Psest_1743	0.34	+1.1
1,848,341	+		Psest_1743	0.47	+0.6
1,848,341	+		Psest_1743	0.47	+2.0
1,848,342	-		Psest_1743	0.47	+1.8
1,848,476	+		Psest_1743	0.53	+2.5
1,848,476	+		Psest_1743	0.53	+1.0
1,848,476	+		Psest_1743	0.53	+0.9
1,848,477	-		Psest_1743	0.53	+2.5
1,848,477	-		Psest_1743	0.53	-1.1
1,848,813	+		Psest_1743	0.69	+1.9
1,848,901	+		Psest_1743	0.73	-0.4
1,848,902	-		Psest_1743	0.73	+1.6
1,849,030	-		Psest_1743	0.79	+1.3
1,849,173	+		Psest_1743	0.85	+0.2
1,849,234	+		Psest_1743	0.88	-1.0
1,849,235	-		Psest_1743	0.88	+2.0
1,849,235	-		Psest_1743	0.88	-1.2
1,849,235	-		Psest_1743	0.88	+2.0
1,849,547	+				+0.4
1,849,547	+				+1.5
1,849,548	-				+1.1
1,849,548	-				+1.0
1,849,548	-				+2.5
1,849,548	-				+0.2
1,849,548	-				+2.0
1,849,548	-				+1.7
1,849,713	+		Psest_1744	0.15	+1.2
1,849,714	-		Psest_1744	0.15	+1.7
1,849,854	+		Psest_1744	0.28	+1.8
1,849,929	-		Psest_1744	0.34	+3.2
1,849,967	+		Psest_1744	0.38	+0.3
1,849,968	-		Psest_1744	0.38	+1.2
1,849,968	-		Psest_1744	0.38	+0.5
1,850,100	+		Psest_1744	0.50	+1.5
1,850,101	-		Psest_1744	0.50	+1.8
1,850,101	-		Psest_1744	0.50	+0.1
1,850,101	-		Psest_1744	0.50	-0.9
1,850,296	+		Psest_1744	0.67	+1.5
1,850,296	+		Psest_1744	0.67	+2.0
1,850,296	+		Psest_1744	0.67	+0.7
1,850,296	+		Psest_1744	0.67	+1.9
1,850,296	+		Psest_1744	0.67	+2.7
1,850,394	+		Psest_1744	0.76	+2.0
1,850,395	-		Psest_1744	0.76	+2.5
1,850,395	-		Psest_1744	0.76	+1.7
1,850,395	-		Psest_1744	0.76	+0.9
1,850,452	+		Psest_1744	0.81	+0.9
1,850,453	-		Psest_1744	0.82	+0.6