Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1737

Experiment: Vancomycin 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.016 mg/ml
1,840,001	+		Psest_1735	0.85	+2.0
1,840,001	+		Psest_1735	0.85	+2.0
1,840,001	+		Psest_1735	0.85	+2.0
1,840,002	-		Psest_1735	0.85	+2.4
1,840,002	-		Psest_1735	0.85	+2.5
1,840,002	-		Psest_1735	0.85	+2.6
1,840,002	-		Psest_1735	0.85	+0.5
1,840,004	+		Psest_1735	0.85	+1.9
1,840,004	+		Psest_1735	0.85	+1.1
1,840,043	+		Psest_1735	0.89	+3.5
1,840,070	+				+2.8
1,840,070	+				+1.7
1,840,071	-				+0.0
1,840,071	-				+3.6
1,840,071	-				+1.2
1,840,071	-				+2.2
1,840,071	-				+1.6
1,840,071	-				+2.4
1,840,077	-				+2.1
1,840,077	-				+2.5
1,840,077	-				+0.4
1,840,389	-		Psest_1736	0.33	-0.3
1,840,411	-		Psest_1736	0.37	-0.2
1,840,411	-		Psest_1736	0.37	+1.6
1,840,570	+		Psest_1736	0.68	+0.2
1,840,570	+		Psest_1736	0.68	+0.5
1,840,570	+		Psest_1736	0.68	+0.2
1,840,570	+		Psest_1736	0.68	+0.4
1,840,570	+		Psest_1736	0.68	+0.3
1,840,571	-		Psest_1736	0.68	+0.8
1,840,571	-		Psest_1736	0.68	-0.7
1,840,652	-		Psest_1736	0.84	+0.7
1,840,782	+				-0.3
1,840,783	-				-1.4
1,840,898	+				+3.2
1,840,898	+				+1.4
1,840,898	+				-0.2
1,840,898	+				+1.7
1,840,898	+				+0.7
1,840,898	+				+0.2
1,840,899	-				+3.6
1,840,899	-				+2.8
1,840,899	-				+1.6
1,840,899	-				+1.2
1,840,899	-				+1.9
1,840,899	-				+2.1
1,840,954	-				+2.1
1,840,980	+				-0.1
1,841,143	+				+3.9
1,841,143	+				-0.8
1,841,144	-				+3.8
1,841,320	+		Psest_1737	0.17	+3.3
1,841,320	+		Psest_1737	0.17	+1.5
1,841,320	+		Psest_1737	0.17	+3.1
1,841,320	+		Psest_1737	0.17	+1.5
1,841,321	-		Psest_1737	0.17	+2.0
1,841,321	-		Psest_1737	0.17	+1.9
1,842,060	+		Psest_1737	0.52	+3.1
1,842,060	+		Psest_1737	0.52	+2.7
1,842,061	-		Psest_1737	0.52	+0.9
1,842,412	+		Psest_1737	0.69	+0.9
1,842,413	-		Psest_1737	0.69	+2.9
1,842,413	-		Psest_1737	0.69	+0.8
1,843,794	-		Psest_1738	0.54	-1.9
1,843,801	+		Psest_1738	0.55	+1.1
1,843,801	+		Psest_1738	0.55	+0.0
1,844,056	+		Psest_1738	0.75	+3.0
1,844,056	+		Psest_1738	0.75	+0.9
1,844,056	+		Psest_1738	0.75	+1.2
1,844,057	-		Psest_1738	0.75	-0.3