Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3880

Experiment: Vancomycin 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.016 mg/ml
4,050,132	-		Psest_3878	0.66	-0.3
4,050,132	-		Psest_3878	0.66	-0.6
4,050,240	+		Psest_3878	0.82	-1.7
4,050,240	+		Psest_3878	0.82	-2.1
4,050,240	+		Psest_3878	0.82	-2.0
4,050,241	-		Psest_3878	0.83	+0.4
4,050,477	+				-0.6
4,050,477	+				+1.7
4,050,478	-				-1.5
4,050,543	-				-0.5
4,050,586	+				+0.5
4,050,586	+				+1.3
4,050,586	+				+4.9
4,050,587	-				-0.3
4,050,587	-				-1.3
4,050,587	-				+0.9
4,050,587	-				+0.4
4,050,729	+		Psest_3879	0.36	-1.7
4,050,729	+		Psest_3879	0.36	-0.9
4,050,729	+		Psest_3879	0.36	-0.7
4,050,729	+		Psest_3879	0.36	+1.0
4,050,729	+		Psest_3879	0.36	-1.0
4,050,730	-		Psest_3879	0.36	+0.3
4,050,730	-		Psest_3879	0.36	+0.4
4,050,948	+		Psest_3879	0.80	+1.0
4,050,948	+		Psest_3879	0.80	-1.2
4,050,948	+		Psest_3879	0.80	+0.3
4,050,948	+		Psest_3879	0.80	+0.2
4,050,951	-		Psest_3879	0.81	+0.0
4,050,951	-		Psest_3879	0.81	-1.2
4,051,273	-		Psest_3880	0.23	-1.0
4,051,273	-		Psest_3880	0.23	-2.4
4,051,273	-		Psest_3880	0.23	-0.3
4,051,273	-		Psest_3880	0.23	-0.9
4,051,547	+		Psest_3880	0.54	+0.2
4,051,547	+		Psest_3880	0.54	-0.5
4,051,547	+		Psest_3880	0.54	+1.8
4,051,548	-		Psest_3880	0.54	-0.3
4,051,548	-		Psest_3880	0.54	+0.1
4,051,548	-		Psest_3880	0.54	-0.8
4,051,548	-		Psest_3880	0.54	+2.1
4,051,548	-		Psest_3880	0.54	-0.8
4,051,548	-		Psest_3880	0.54	-0.7
4,051,572	+		Psest_3880	0.57	+1.2
4,051,572	+		Psest_3880	0.57	+0.3
4,051,572	+		Psest_3880	0.57	-1.0
4,051,572	+		Psest_3880	0.57	-0.9
4,051,572	+		Psest_3880	0.57	+0.0
4,051,573	-		Psest_3880	0.57	-0.9
4,051,573	-		Psest_3880	0.57	-1.2
4,051,573	-		Psest_3880	0.57	+0.5
4,051,603	-		Psest_3880	0.60	+0.2
4,051,603	-		Psest_3880	0.60	-0.5
4,051,603	-		Psest_3880	0.60	-0.8
4,051,603	-		Psest_3880	0.60	-2.4
4,051,796	+		Psest_3880	0.82	-1.0
4,051,797	-		Psest_3880	0.82	+0.1
4,051,797	-		Psest_3880	0.82	-1.0
4,051,800	+		Psest_3880	0.83	+0.0
4,051,800	+		Psest_3880	0.83	-0.3
4,051,800	+		Psest_3880	0.83	+0.3
4,051,800	+		Psest_3880	0.83	+1.5
4,051,800	+		Psest_3880	0.83	+0.8
4,051,801	-		Psest_3880	0.83	+0.2
4,051,801	-		Psest_3880	0.83	-0.8
4,051,801	-		Psest_3880	0.83	-3.0
4,051,801	-		Psest_3880	0.83	-1.6
4,051,801	-		Psest_3880	0.83	-1.7
4,051,801	-				+3.5
4,051,801	-		Psest_3880	0.83	+0.5
4,051,801	-		Psest_3880	0.83	-0.6
4,051,801	-		Psest_3880	0.83	-0.6
4,051,878	+				+0.5
4,051,878	+				+1.3
4,051,951	-				+1.6
4,052,063	-		Psest_3881	0.16	+0.9
4,052,501	-				-1.7
4,052,540	-				-0.1
4,052,759	+		Psest_3882	0.38	-1.8
4,052,759	+		Psest_3882	0.38	-3.7
4,052,759	+		Psest_3882	0.38	-0.4
4,052,759	+		Psest_3882	0.38	-2.5
4,052,759	+		Psest_3882	0.38	-0.2
4,052,759	+		Psest_3882	0.38	-0.9
4,052,759	+		Psest_3882	0.38	+1.2
4,052,759	+		Psest_3882	0.38	-0.8
4,052,759	+		Psest_3882	0.38	-0.8
4,052,759	+		Psest_3882	0.38	-1.5
4,052,759	+		Psest_3882	0.38	-1.0
4,052,759	+		Psest_3882	0.38	-0.2
4,052,759	+		Psest_3882	0.38	-1.0
4,052,759	+		Psest_3882	0.38	-1.5
4,052,759	+		Psest_3882	0.38	-0.3
4,052,759	+		Psest_3882	0.38	-1.0
4,052,759	+		Psest_3882	0.38	-2.8
4,052,760	-		Psest_3882	0.38	-0.3
4,052,760	-		Psest_3882	0.38	-2.5
4,052,760	-		Psest_3882	0.38	-0.7
4,052,760	-		Psest_3882	0.38	-1.4
4,052,760	-		Psest_3882	0.38	-0.7
4,052,768	+		Psest_3882	0.40	-1.0
4,052,768	+		Psest_3882	0.40	-1.4
4,052,768	+		Psest_3882	0.40	+0.6
4,052,769	-		Psest_3882	0.40	+0.3
4,052,769	-		Psest_3882	0.40	-1.2
4,052,769	-		Psest_3882	0.40	+0.7
4,052,769	-		Psest_3882	0.40	-0.2
4,052,769	-		Psest_3882	0.40	-1.6
4,052,834	+		Psest_3882	0.50	-1.8
4,052,834	+		Psest_3882	0.50	-3.7
4,052,835	-		Psest_3882	0.51	-1.1
4,052,835	-		Psest_3882	0.51	-0.5
4,052,835	-		Psest_3882	0.51	-1.0
4,052,835	-		Psest_3882	0.51	-1.5
4,052,925	-		Psest_3882	0.66	-0.5
4,052,925	-		Psest_3882	0.66	-1.0