Experiment: Vancomycin 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2659 and Psest_2660 are separated by 176 nucleotides
Psest_2659: Psest_2659 - Transcriptional regulator, at 2,845,565 to 2,846,464
_2659
Psest_2660: Psest_2660 - Predicted acyl-CoA transferases/carnitine dehydratase, at 2,846,641 to 2,847,843
_2660
Position (kb)
2845
2846
2847 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2844.693 kb on + strand at 2844.710 kb on + strand at 2844.710 kb on + strand at 2844.711 kb on - strand at 2844.739 kb on + strand at 2844.739 kb on + strand at 2844.743 kb on + strand at 2844.743 kb on + strand at 2844.743 kb on + strand at 2844.743 kb on + strand at 2844.743 kb on + strand at 2844.743 kb on + strand at 2844.743 kb on + strand at 2844.744 kb on - strand at 2844.744 kb on - strand at 2844.744 kb on - strand at 2844.744 kb on - strand at 2844.744 kb on - strand at 2844.744 kb on - strand at 2844.744 kb on - strand at 2844.761 kb on + strand at 2844.762 kb on - strand at 2844.773 kb on + strand at 2844.773 kb on + strand at 2844.773 kb on + strand at 2844.773 kb on + strand at 2844.773 kb on + strand at 2844.773 kb on + strand at 2844.773 kb on + strand at 2844.773 kb on + strand at 2844.774 kb on - strand at 2844.774 kb on - strand at 2844.774 kb on - strand at 2844.774 kb on - strand at 2844.774 kb on - strand at 2844.830 kb on + strand at 2844.830 kb on + strand at 2844.830 kb on + strand at 2844.830 kb on + strand at 2844.878 kb on + strand at 2844.879 kb on - strand at 2844.907 kb on + strand at 2845.124 kb on + strand at 2845.125 kb on - strand at 2845.125 kb on - strand at 2845.205 kb on + strand at 2845.206 kb on - strand at 2845.317 kb on + strand at 2845.318 kb on - strand at 2845.437 kb on - strand at 2845.437 kb on - strand at 2845.498 kb on - strand at 2845.694 kb on + strand, within Psest_2659 at 2845.695 kb on - strand, within Psest_2659 at 2845.713 kb on + strand, within Psest_2659 at 2845.713 kb on + strand, within Psest_2659 at 2845.714 kb on - strand, within Psest_2659 at 2845.714 kb on - strand, within Psest_2659 at 2846.008 kb on + strand, within Psest_2659 at 2846.008 kb on + strand, within Psest_2659 at 2846.008 kb on + strand, within Psest_2659 at 2846.008 kb on + strand, within Psest_2659 at 2846.122 kb on + strand, within Psest_2659 at 2846.122 kb on + strand, within Psest_2659 at 2846.122 kb on + strand, within Psest_2659 at 2846.123 kb on - strand, within Psest_2659 at 2846.123 kb on - strand, within Psest_2659 at 2846.161 kb on + strand, within Psest_2659 at 2846.161 kb on + strand, within Psest_2659 at 2846.161 kb on + strand, within Psest_2659 at 2846.190 kb on - strand, within Psest_2659 at 2846.478 kb on - strand at 2847.090 kb on + strand, within Psest_2660 at 2847.090 kb on + strand, within Psest_2660 at 2847.090 kb on + strand, within Psest_2660 at 2847.090 kb on + strand, within Psest_2660 at 2847.091 kb on - strand, within Psest_2660 at 2847.091 kb on - strand, within Psest_2660 at 2847.178 kb on + strand, within Psest_2660 at 2847.194 kb on + strand, within Psest_2660 at 2847.298 kb on + strand, within Psest_2660 at 2847.299 kb on - strand, within Psest_2660 at 2847.317 kb on + strand, within Psest_2660 at 2847.389 kb on - strand, within Psest_2660 at 2847.389 kb on - strand, within Psest_2660 at 2847.389 kb on - strand, within Psest_2660 at 2847.389 kb on - strand, within Psest_2660 at 2847.421 kb on + strand, within Psest_2660 at 2847.421 kb on + strand, within Psest_2660 at 2847.421 kb on + strand, within Psest_2660 at 2847.421 kb on + strand, within Psest_2660 at 2847.421 kb on + strand, within Psest_2660 at 2847.421 kb on + strand, within Psest_2660 at 2847.421 kb on + strand, within Psest_2660 at 2847.422 kb on - strand, within Psest_2660 at 2847.422 kb on - strand, within Psest_2660 at 2847.422 kb on - strand, within Psest_2660 at 2847.422 kb on - strand, within Psest_2660 at 2847.422 kb on - strand, within Psest_2660 at 2847.422 kb on - strand, within Psest_2660 at 2847.422 kb on - strand, within Psest_2660 at 2847.422 kb on - strand, within Psest_2660 at 2847.422 kb on - strand, within Psest_2660 at 2847.422 kb on - strand, within Psest_2660 at 2847.422 kb on - strand, within Psest_2660 at 2847.422 kb on - strand, within Psest_2660
Per-strain Table
Position Strand Gene LocusTag Fraction Vancomycin 0.016 mg/ml remove 2,844,693 + -0.0 2,844,710 + +1.3 2,844,710 + +0.7 2,844,711 - -0.2 2,844,739 + +0.9 2,844,739 + +1.1 2,844,743 + -0.7 2,844,743 + -0.8 2,844,743 + +0.5 2,844,743 + +0.1 2,844,743 + +2.0 2,844,743 + -0.5 2,844,743 + +1.8 2,844,744 - -0.2 2,844,744 - -1.6 2,844,744 - -1.5 2,844,744 - -0.5 2,844,744 - +0.1 2,844,744 - +1.1 2,844,744 - +0.5 2,844,761 + +1.5 2,844,762 - -1.1 2,844,773 + +0.8 2,844,773 + -0.0 2,844,773 + -0.2 2,844,773 + +0.8 2,844,773 + -0.3 2,844,773 + -1.1 2,844,773 + +0.1 2,844,773 + +0.4 2,844,774 - +0.9 2,844,774 - -0.5 2,844,774 - -0.8 2,844,774 - -0.4 2,844,774 - +0.8 2,844,830 + +0.6 2,844,830 + -0.1 2,844,830 + +0.2 2,844,830 + +2.1 2,844,878 + +1.1 2,844,879 - +1.5 2,844,907 + -1.8 2,845,124 + +1.5 2,845,125 - -2.0 2,845,125 - -1.0 2,845,205 + -0.0 2,845,206 - -1.7 2,845,317 + -0.5 2,845,318 - +0.5 2,845,437 - +0.5 2,845,437 - +0.4 2,845,498 - -0.0 2,845,694 + Psest_2659 0.14 -1.5 2,845,695 - Psest_2659 0.14 +0.4 2,845,713 + Psest_2659 0.16 +0.3 2,845,713 + Psest_2659 0.16 -0.3 2,845,714 - Psest_2659 0.17 -0.0 2,845,714 - Psest_2659 0.17 -0.9 2,846,008 + Psest_2659 0.49 -0.5 2,846,008 + Psest_2659 0.49 -0.1 2,846,008 + Psest_2659 0.49 -0.6 2,846,008 + Psest_2659 0.49 -1.1 2,846,122 + Psest_2659 0.62 -0.4 2,846,122 + Psest_2659 0.62 -1.9 2,846,122 + Psest_2659 0.62 +1.4 2,846,123 - Psest_2659 0.62 +0.8 2,846,123 - Psest_2659 0.62 +0.6 2,846,161 + Psest_2659 0.66 -1.8 2,846,161 + Psest_2659 0.66 -1.3 2,846,161 + Psest_2659 0.66 -0.9 2,846,190 - Psest_2659 0.69 -2.1 2,846,478 - -0.2 2,847,090 + Psest_2660 0.37 -0.8 2,847,090 + Psest_2660 0.37 +0.2 2,847,090 + Psest_2660 0.37 +0.2 2,847,090 + Psest_2660 0.37 -0.3 2,847,091 - Psest_2660 0.37 +1.5 2,847,091 - Psest_2660 0.37 -0.7 2,847,178 + Psest_2660 0.45 -1.1 2,847,194 + Psest_2660 0.46 -2.5 2,847,298 + Psest_2660 0.55 +0.6 2,847,299 - Psest_2660 0.55 -0.0 2,847,317 + Psest_2660 0.56 +1.1 2,847,389 - Psest_2660 0.62 -1.3 2,847,389 - Psest_2660 0.62 -1.0 2,847,389 - Psest_2660 0.62 -0.7 2,847,389 - Psest_2660 0.62 +0.1 2,847,421 + Psest_2660 0.65 +0.4 2,847,421 + Psest_2660 0.65 -0.4 2,847,421 + Psest_2660 0.65 -0.1 2,847,421 + Psest_2660 0.65 -1.2 2,847,421 + Psest_2660 0.65 +0.1 2,847,421 + Psest_2660 0.65 +1.3 2,847,421 + Psest_2660 0.65 -0.8 2,847,422 - Psest_2660 0.65 +0.4 2,847,422 - Psest_2660 0.65 +0.0 2,847,422 - Psest_2660 0.65 +0.6 2,847,422 - Psest_2660 0.65 -0.6 2,847,422 - Psest_2660 0.65 -0.4 2,847,422 - Psest_2660 0.65 -0.1 2,847,422 - Psest_2660 0.65 +0.8 2,847,422 - Psest_2660 0.65 -0.5 2,847,422 - Psest_2660 0.65 +3.2 2,847,422 - Psest_2660 0.65 +0.3 2,847,422 - Psest_2660 0.65 -0.8 2,847,422 - Psest_2660 0.65 -1.1
Or see this region's nucleotide sequence