Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1324

Experiment: Vancomycin 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Vancomycin 0.016 mg/ml
1,423,843	+				+1.3
1,423,843	+				+0.1
1,423,843	+				+1.7
1,423,843	+				-0.5
1,423,844	-				+0.5
1,423,844	-				+0.3
1,423,844	-				+1.9
1,423,844	-				-0.5
1,424,116	+		Psest_1323	0.33	-0.7
1,424,133	+		Psest_1323	0.35	+1.4
1,424,133	+		Psest_1323	0.35	-0.1
1,424,133	+		Psest_1323	0.35	+1.3
1,424,133	+		Psest_1323	0.35	+0.9
1,424,133	+		Psest_1323	0.35	-0.4
1,424,133	+		Psest_1323	0.35	-1.2
1,424,134	-		Psest_1323	0.35	+0.1
1,424,134	-		Psest_1323	0.35	+0.2
1,424,395	-		Psest_1323	0.68	-0.1
1,424,400	-		Psest_1323	0.69	+0.8
1,424,578	-				-0.7
1,424,699	+				+0.8
1,424,699	+				-1.0
1,424,699	+				-1.7
1,424,699	+				+0.3
1,424,700	-				+1.6
1,424,700	-				-0.5
1,424,739	+				+1.8
1,424,739	+				-0.7
1,424,739	+				+0.2
1,424,739	+				+0.7
1,424,740	-				-1.4
1,424,740	-				-0.1
1,424,740	-				-0.6
1,424,740	-				+0.1
1,424,741	+				+0.3
1,424,741	+				-0.9
1,424,741	+				-0.2
1,424,741	+				+0.4
1,424,741	+				-1.5
1,424,741	+				-0.1
1,424,742	-				+0.4
1,424,742	-				+0.2
1,424,742	-				-2.2
1,424,742	-				+1.7
1,424,742	-				-0.2
1,424,742	-				+0.1
1,424,941	+		Psest_1324	0.13	+3.0
1,424,941	+		Psest_1324	0.13	-2.8
1,424,942	-		Psest_1324	0.13	+0.8
1,425,460	+		Psest_1324	0.52	+0.6
1,425,460	+		Psest_1324	0.52	-1.3
1,425,460	+		Psest_1324	0.52	-0.5
1,425,460	+		Psest_1324	0.52	+0.1
1,425,460	+		Psest_1324	0.52	-1.3
1,425,460	+		Psest_1324	0.52	+0.9
1,425,460	+		Psest_1324	0.52	-1.0
1,425,460	+		Psest_1324	0.52	+0.5
1,425,460	+		Psest_1324	0.52	-0.9
1,425,461	-		Psest_1324	0.52	+0.1
1,425,461	-		Psest_1324	0.52	-0.7
1,425,461	-		Psest_1324	0.52	+0.2
1,425,461	-		Psest_1324	0.52	+0.8
1,425,469	-		Psest_1324	0.52	+1.3
1,425,748	+		Psest_1324	0.73	+0.2
1,425,748	+		Psest_1324	0.73	-0.1
1,425,757	+		Psest_1324	0.74	-0.2
1,425,757	+		Psest_1324	0.74	-2.4
1,425,757	+		Psest_1324	0.74	-1.4
1,425,757	+		Psest_1324	0.74	+0.0
1,425,757	+		Psest_1324	0.74	-0.1
1,425,757	+		Psest_1324	0.74	+0.7
1,425,758	-		Psest_1324	0.74	-1.8
1,425,758	-		Psest_1324	0.74	-1.3
1,425,758	-		Psest_1324	0.74	+1.1
1,425,758	-		Psest_1324	0.74	-0.7
1,425,758	-		Psest_1324	0.74	-0.0
1,425,758	-		Psest_1324	0.74	-0.6
1,425,758	-		Psest_1324	0.74	+1.3
1,425,758	-		Psest_1324	0.74	-1.0
1,425,759	+		Psest_1324	0.74	-0.1
1,425,760	-		Psest_1324	0.74	-0.3
1,425,760	-		Psest_1324	0.74	-0.1
1,425,841	+		Psest_1324	0.80	+0.5
1,425,841	+		Psest_1324	0.80	+1.0
1,425,842	-		Psest_1324	0.80	+0.6
1,425,976	+				+1.2
1,425,977	-				+0.3
1,425,977	-				+1.2
1,426,112	-				+0.7
1,426,192	-				+0.6
1,426,219	+				-0.6
1,426,220	-				+0.8
1,426,274	-				+0.7
1,426,304	+				+1.7
1,426,304	+				+0.0
1,426,304	+				-1.5
1,426,425	+		Psest_1325	0.13	+1.4
1,426,425	+		Psest_1325	0.13	-0.5
1,426,461	+		Psest_1325	0.16	-0.5
1,426,746	+		Psest_1325	0.38	-2.0
1,426,773	+		Psest_1325	0.41	+1.4
1,426,830	-		Psest_1325	0.45	-2.1
1,427,021	+		Psest_1325	0.60	-0.1
1,427,022	-		Psest_1325	0.60	+0.7
1,427,064	+		Psest_1325	0.64	+0.9