Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0925

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,002,708	-		Psest_0922	0.85	+0.6
1,002,752	-				+0.7
1,002,752	-				+0.6
1,002,752	-				-1.4
1,002,752	-				+0.1
1,002,804	+				-1.5
1,002,804	+				-0.0
1,002,804	+				+1.4
1,002,805	-				-0.7
1,002,805	-				-0.7
1,002,814	+				-1.6
1,002,814	+				+0.9
1,002,814	+				+0.5
1,002,814	+				-1.5
1,002,815	-				-2.6
1,002,815	-				+0.3
1,002,815	-				+0.4
1,002,836	+				-0.0
1,002,836	+				+0.2
1,002,836	+				+0.4
1,002,836	+				+1.5
1,002,836	+				-2.6
1,002,837	-				-0.4
1,002,837	-				-1.7
1,002,837	-				-0.2
1,002,837	-				-0.1
1,002,839	-				-0.8
1,002,839	-				+0.3
1,002,839	-				+0.3
1,002,839	-				-2.5
1,002,839	-				-0.7
1,002,986	+		Psest_0923	0.60	+0.3
1,002,986	+		Psest_0923	0.60	-0.9
1,002,986	+		Psest_0923	0.60	+2.4
1,002,986	+		Psest_0923	0.60	+1.4
1,002,986	+		Psest_0923	0.60	-0.9
1,002,986	+		Psest_0923	0.60	+0.8
1,002,986	+		Psest_0923	0.60	-0.6
1,002,986	+		Psest_0923	0.60	+0.0
1,002,986	+		Psest_0923	0.60	+1.2
1,002,986	+		Psest_0923	0.60	-0.0
1,002,986	+		Psest_0923	0.60	+0.7
1,002,986	+		Psest_0923	0.60	+1.8
1,002,986	+		Psest_0923	0.60	-0.5
1,002,987	-		Psest_0923	0.61	-0.3
1,002,987	-		Psest_0923	0.61	+0.1
1,002,987	-		Psest_0923	0.61	-0.7
1,002,987	-		Psest_0923	0.61	+0.3
1,002,987	-		Psest_0923	0.61	-0.7
1,002,987	-		Psest_0923	0.61	-0.5
1,002,987	-		Psest_0923	0.61	+0.5
1,002,987	-		Psest_0923	0.61	-1.7
1,002,987	-		Psest_0923	0.61	-1.6
1,002,987	-		Psest_0923	0.61	+0.5
1,002,987	-		Psest_0923	0.61	-1.5
1,002,987	-		Psest_0923	0.61	-0.2
1,002,987	-		Psest_0923	0.61	-1.9
1,002,987	-		Psest_0923	0.61	+1.4
1,002,987	-		Psest_0923	0.61	+1.0
1,002,987	-		Psest_0923	0.61	-1.2
1,002,987	-		Psest_0923	0.61	-1.3
1,002,987	-		Psest_0923	0.61	+1.6
1,003,051	+		Psest_0923	0.84	+0.6
1,003,089	+				-0.0
1,003,089	+				-0.7
1,003,089	+				-0.2
1,003,089	+				+0.5
1,003,090	-				+0.1
1,003,140	+				+0.4
1,003,169	+				+0.2
1,003,169	+				+0.3
1,003,169	+				+0.2
1,003,169	+				+0.8
1,003,169	+				+0.5
1,003,169	+				-0.3
1,003,169	+				+1.0
1,003,169	+				+0.1
1,003,169	+				-1.7
1,003,169	+				-0.9
1,003,169	+				-0.3
1,003,169	+				+0.0
1,003,169	+				-0.6
1,003,169	+				-0.3
1,003,169	+				+0.3
1,003,169	+				-2.8
1,003,169	+				+0.2
1,003,169	+				-1.6
1,003,169	+				-0.3
1,003,169	+				+1.1
1,003,169	+				+1.1
1,003,169	+				+1.1
1,003,169	+				+0.6
1,003,169	+				+0.4
1,003,169	+				+0.0
1,003,169	+				+0.7
1,003,169	+				+0.5
1,003,169	+				+1.3
1,003,169	+				+0.1
1,003,169	+				-0.6
1,003,169	+				-0.1
1,003,169	+				+0.1
1,003,169	+				+0.3
1,003,169	+				+1.3
1,003,169	+				-1.7
1,003,170	-				-0.3
1,003,170	-				-2.6
1,003,170	-				-0.7
1,003,170	-				-0.5
1,003,170	-				+0.1
1,003,170	-				+1.2
1,003,170	-				-1.5
1,003,170	-				+1.9
1,003,170	-				-1.7
1,003,170	-				-0.6
1,003,170	-				-0.7
1,003,170	-				+0.4
1,003,170	-				-0.4
1,003,170	-				+0.5
1,003,170	-				+0.5
1,003,170	-				+1.9
1,003,170	-				+2.0
1,003,170	-				-2.1
1,003,170	-				-0.6
1,003,170	-				+0.6
1,003,170	-				+0.5
1,003,170	-				-0.3
1,003,170	-				+0.6
1,003,170	-				+1.7
1,003,170	-				-2.2
1,003,170	-				-1.4
1,003,170	-				+0.6
1,003,170	-				+0.8
1,003,170	-				+0.0
1,003,170	-				+0.3
1,003,170	-				+0.4
1,003,170	-				+0.9
1,003,170	-				-2.6
1,003,170	-				-0.2
1,003,170	-				-0.7
1,003,170	-				+0.1
1,003,170	-				-0.3
1,003,170	-				-0.5
1,003,170	-				-0.3
1,003,198	+				+0.1
1,003,199	-				-0.5
1,003,424	+				+0.1
1,003,471	+				-0.9
1,003,517	+				+0.1
1,003,581	+				-2.2
1,003,582	-				-1.4
1,003,582	-				-1.0
1,003,640	+				+0.9
1,003,640	+				-0.2
1,003,646	+				-3.0
1,003,688	-		Psest_0925	0.11	+1.6
1,003,693	-		Psest_0925	0.13	-0.3
1,003,693	-		Psest_0925	0.13	+0.4
1,003,775	+		Psest_0925	0.41	+1.4
1,003,776	-		Psest_0925	0.42	+1.3
1,003,776	-		Psest_0925	0.42	+1.1
1,003,776	-		Psest_0925	0.42	+3.2
1,003,848	+		Psest_0925	0.66	-1.7
1,003,849	-		Psest_0925	0.67	+1.1
1,004,003	+				-0.9
1,004,003	+				-0.7
1,004,003	+				+0.1
1,004,004	-				+1.2
1,004,007	+				-2.5
1,004,007	+				-0.3
1,004,007	+				+1.4
1,004,007	+				+0.4
1,004,008	-				+0.1
1,004,008	-				+0.3
1,004,008	-				-1.0
1,004,008	-				+1.4
1,004,008	-				-0.2
1,004,008	-				-1.4
1,004,122	+		Psest_0926	0.11	-1.3
1,004,123	-		Psest_0926	0.11	+1.6
1,004,150	+		Psest_0926	0.14	-0.3
1,004,150	+		Psest_0926	0.14	+0.0
1,004,151	-		Psest_0926	0.14	+1.8
1,004,220	+		Psest_0926	0.22	-0.9
1,004,220	+		Psest_0926	0.22	+1.1
1,004,221	-		Psest_0926	0.22	-0.6
1,004,221	-		Psest_0926	0.22	-1.4
1,004,221	-		Psest_0926	0.22	-2.2
1,004,240	-		Psest_0926	0.24	+0.8
1,004,297	-		Psest_0926	0.30	+1.3
1,004,317	-		Psest_0926	0.32	+0.2
1,004,317	-		Psest_0926	0.32	+3.0
1,004,317	-		Psest_0926	0.32	-0.3
1,004,368	+		Psest_0926	0.38	-2.2
1,004,369	-		Psest_0926	0.38	-1.0
1,004,369	-		Psest_0926	0.38	-0.6
1,004,431	+		Psest_0926	0.44	+0.8
1,004,431	+		Psest_0926	0.44	+1.0
1,004,432	-		Psest_0926	0.45	+1.6
1,004,512	+		Psest_0926	0.53	+0.5
1,004,545	-		Psest_0926	0.57	-0.2
1,004,628	+		Psest_0926	0.66	+0.5
1,004,629	-		Psest_0926	0.66	+0.6
1,004,629	-		Psest_0926	0.66	+0.7
1,004,723	+		Psest_0926	0.76	-1.0
1,004,753	-		Psest_0926	0.79	-0.1
1,004,753	-		Psest_0926	0.79	+1.2