Experiment: LB
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4130 and Psest_4131 are separated by 205 nucleotides Psest_4131 and Psest_4132 are separated by 31 nucleotides
Psest_4130: Psest_4130 - uncharacterized domain HDIG, at 4,309,237 to 4,310,451
_4130
Psest_4131: Psest_4131 - alpha-ketoglutarate sensor protein (mifS) (from data) , at 4,310,657 to 4,312,420
_4131
Psest_4132: Psest_4132 - alpha-ketoglutarate DNA-binding response regulator (mifR) (from data) , at 4,312,452 to 4,313,795
_4132
Position (kb)
4310
4311
4312
4313 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 4309.790 kb on + strand, within Psest_4130 at 4309.790 kb on + strand, within Psest_4130 at 4309.790 kb on + strand, within Psest_4130 at 4309.790 kb on + strand, within Psest_4130 at 4309.790 kb on + strand, within Psest_4130 at 4309.790 kb on + strand, within Psest_4130 at 4309.790 kb on + strand, within Psest_4130 at 4309.790 kb on + strand, within Psest_4130 at 4309.790 kb on + strand, within Psest_4130 at 4309.790 kb on + strand, within Psest_4130 at 4309.790 kb on + strand, within Psest_4130 at 4309.790 kb on + strand, within Psest_4130 at 4309.790 kb on + strand, within Psest_4130 at 4309.790 kb on + strand, within Psest_4130 at 4309.790 kb on + strand, within Psest_4130 at 4309.790 kb on + strand, within Psest_4130 at 4309.790 kb on + strand, within Psest_4130 at 4309.790 kb on + strand, within Psest_4130 at 4309.790 kb on + strand, within Psest_4130 at 4309.790 kb on + strand, within Psest_4130 at 4309.790 kb on + strand, within Psest_4130 at 4309.790 kb on + strand, within Psest_4130 at 4309.790 kb on + strand, within Psest_4130 at 4309.790 kb on + strand, within Psest_4130 at 4309.790 kb on + strand, within Psest_4130 at 4309.790 kb on + strand, within Psest_4130 at 4309.790 kb on + strand, within Psest_4130 at 4309.790 kb on + strand, within Psest_4130 at 4309.790 kb on + strand, within Psest_4130 at 4309.790 kb on + strand, within Psest_4130 at 4309.790 kb on + strand, within Psest_4130 at 4309.790 kb on + strand, within Psest_4130 at 4309.790 kb on + strand, within Psest_4130 at 4309.790 kb on + strand, within Psest_4130 at 4309.791 kb on - strand, within Psest_4130 at 4309.791 kb on - strand, within Psest_4130 at 4309.791 kb on - strand, within Psest_4130 at 4309.791 kb on - strand, within Psest_4130 at 4309.791 kb on - strand, within Psest_4130 at 4309.791 kb on - strand, within Psest_4130 at 4309.791 kb on - strand, within Psest_4130 at 4309.791 kb on - strand, within Psest_4130 at 4309.791 kb on - strand, within Psest_4130 at 4309.791 kb on - strand, within Psest_4130 at 4309.791 kb on - strand, within Psest_4130 at 4309.791 kb on - strand, within Psest_4130 at 4309.791 kb on - strand, within Psest_4130 at 4309.791 kb on - strand, within Psest_4130 at 4309.791 kb on - strand, within Psest_4130 at 4309.791 kb on - strand, within Psest_4130 at 4309.791 kb on - strand, within Psest_4130 at 4309.791 kb on - strand, within Psest_4130 at 4309.791 kb on - strand, within Psest_4130 at 4309.791 kb on - strand, within Psest_4130 at 4309.791 kb on - strand, within Psest_4130 at 4309.791 kb on - strand, within Psest_4130 at 4309.791 kb on - strand, within Psest_4130 at 4309.961 kb on + strand, within Psest_4130 at 4309.961 kb on + strand, within Psest_4130 at 4309.961 kb on + strand, within Psest_4130 at 4309.961 kb on + strand, within Psest_4130 at 4309.961 kb on + strand, within Psest_4130 at 4309.961 kb on + strand, within Psest_4130 at 4309.961 kb on + strand, within Psest_4130 at 4309.961 kb on + strand, within Psest_4130 at 4309.961 kb on + strand, within Psest_4130 at 4309.961 kb on + strand, within Psest_4130 at 4309.962 kb on - strand, within Psest_4130 at 4309.962 kb on - strand, within Psest_4130 at 4309.962 kb on - strand, within Psest_4130 at 4309.962 kb on - strand, within Psest_4130 at 4309.962 kb on - strand, within Psest_4130 at 4309.962 kb on - strand, within Psest_4130 at 4309.962 kb on - strand, within Psest_4130 at 4309.962 kb on - strand, within Psest_4130 at 4309.962 kb on - strand, within Psest_4130 at 4309.962 kb on - strand, within Psest_4130 at 4309.962 kb on - strand, within Psest_4130 at 4309.962 kb on - strand, within Psest_4130 at 4309.962 kb on - strand, within Psest_4130 at 4309.962 kb on - strand, within Psest_4130 at 4309.962 kb on - strand, within Psest_4130 at 4309.962 kb on - strand, within Psest_4130 at 4309.962 kb on - strand, within Psest_4130 at 4309.962 kb on - strand, within Psest_4130 at 4309.962 kb on - strand, within Psest_4130 at 4309.962 kb on - strand, within Psest_4130 at 4309.962 kb on - strand, within Psest_4130 at 4309.962 kb on - strand, within Psest_4130 at 4309.962 kb on - strand, within Psest_4130 at 4309.962 kb on - strand, within Psest_4130 at 4309.962 kb on - strand, within Psest_4130 at 4309.962 kb on - strand, within Psest_4130 at 4309.962 kb on - strand, within Psest_4130 at 4309.967 kb on + strand, within Psest_4130 at 4309.967 kb on + strand, within Psest_4130 at 4309.967 kb on + strand, within Psest_4130 at 4309.967 kb on + strand, within Psest_4130 at 4309.967 kb on + strand, within Psest_4130 at 4309.968 kb on - strand, within Psest_4130 at 4309.968 kb on - strand, within Psest_4130 at 4309.968 kb on - strand, within Psest_4130 at 4309.968 kb on - strand, within Psest_4130 at 4309.968 kb on - strand, within Psest_4130 at 4310.307 kb on + strand, within Psest_4130 at 4310.307 kb on + strand, within Psest_4130 at 4310.404 kb on + strand at 4310.404 kb on + strand at 4310.404 kb on + strand at 4310.405 kb on - strand at 4310.405 kb on - strand at 4310.405 kb on - strand at 4310.408 kb on + strand at 4310.408 kb on + strand at 4310.408 kb on + strand at 4310.409 kb on - strand at 4310.409 kb on - strand at 4310.409 kb on - strand at 4310.409 kb on - strand at 4310.409 kb on - strand at 4310.409 kb on - strand at 4310.409 kb on - strand at 4310.409 kb on - strand at 4310.409 kb on - strand at 4310.409 kb on - strand at 4310.409 kb on - strand at 4310.409 kb on - strand at 4310.409 kb on - strand at 4310.409 kb on - strand at 4310.409 kb on - strand at 4310.409 kb on - strand at 4310.445 kb on + strand at 4310.445 kb on + strand at 4310.446 kb on - strand at 4310.530 kb on + strand at 4310.530 kb on + strand at 4310.530 kb on + strand at 4310.530 kb on + strand at 4310.530 kb on + strand at 4310.530 kb on + strand at 4310.530 kb on + strand at 4310.530 kb on + strand at 4310.530 kb on + strand at 4310.530 kb on + strand at 4310.530 kb on + strand at 4310.530 kb on + strand at 4310.530 kb on + strand at 4310.530 kb on + strand at 4310.530 kb on + strand at 4310.530 kb on + strand at 4310.530 kb on + strand at 4310.530 kb on + strand at 4310.530 kb on + strand at 4310.531 kb on - strand at 4310.531 kb on - strand at 4310.531 kb on - strand at 4310.531 kb on - strand at 4310.531 kb on - strand at 4310.531 kb on - strand at 4310.531 kb on - strand at 4310.531 kb on - strand at 4310.531 kb on - strand at 4310.531 kb on - strand at 4310.531 kb on - strand at 4310.531 kb on - strand at 4310.531 kb on - strand at 4310.531 kb on - strand at 4310.531 kb on - strand at 4310.531 kb on - strand at 4310.531 kb on - strand at 4310.531 kb on - strand at 4310.531 kb on - strand at 4310.531 kb on - strand at 4310.625 kb on + strand at 4310.625 kb on + strand at 4310.625 kb on + strand at 4310.626 kb on - strand at 4310.626 kb on - strand at 4310.686 kb on - strand at 4310.807 kb on + strand at 4310.978 kb on + strand, within Psest_4131 at 4310.979 kb on - strand, within Psest_4131 at 4310.979 kb on - strand, within Psest_4131 at 4311.053 kb on + strand, within Psest_4131 at 4311.053 kb on + strand, within Psest_4131 at 4311.053 kb on + strand, within Psest_4131 at 4311.053 kb on + strand, within Psest_4131 at 4311.053 kb on + strand, within Psest_4131 at 4311.054 kb on - strand, within Psest_4131 at 4311.054 kb on - strand, within Psest_4131 at 4311.054 kb on - strand, within Psest_4131 at 4311.068 kb on + strand, within Psest_4131 at 4311.513 kb on + strand, within Psest_4131 at 4311.513 kb on + strand, within Psest_4131 at 4311.514 kb on - strand, within Psest_4131 at 4311.514 kb on - strand, within Psest_4131 at 4311.514 kb on - strand, within Psest_4131 at 4311.612 kb on - strand, within Psest_4131 at 4311.981 kb on + strand, within Psest_4131 at 4312.384 kb on + strand at 4312.465 kb on + strand at 4312.465 kb on + strand at 4312.465 kb on + strand at 4312.465 kb on + strand at 4312.466 kb on - strand at 4312.466 kb on - strand at 4312.743 kb on + strand, within Psest_4132 at 4312.907 kb on + strand, within Psest_4132 at 4312.908 kb on - strand, within Psest_4132 at 4313.255 kb on - strand, within Psest_4132 at 4313.384 kb on + strand, within Psest_4132 at 4313.384 kb on + strand, within Psest_4132 at 4313.385 kb on - strand, within Psest_4132 at 4313.385 kb on - strand, within Psest_4132
Per-strain Table
Position Strand Gene LocusTag Fraction LB remove 4,309,790 + Psest_4130 0.46 -2.4 4,309,790 + Psest_4130 0.46 -0.6 4,309,790 + Psest_4130 0.46 -0.4 4,309,790 + Psest_4130 0.46 -2.1 4,309,790 + Psest_4130 0.46 +0.2 4,309,790 + Psest_4130 0.46 +0.3 4,309,790 + Psest_4130 0.46 -0.2 4,309,790 + Psest_4130 0.46 +0.2 4,309,790 + Psest_4130 0.46 -1.2 4,309,790 + Psest_4130 0.46 -0.6 4,309,790 + Psest_4130 0.46 -0.5 4,309,790 + Psest_4130 0.46 -0.8 4,309,790 + Psest_4130 0.46 -1.6 4,309,790 + Psest_4130 0.46 -0.5 4,309,790 + Psest_4130 0.46 +0.9 4,309,790 + Psest_4130 0.46 -0.3 4,309,790 + Psest_4130 0.46 -1.1 4,309,790 + Psest_4130 0.46 -0.8 4,309,790 + Psest_4130 0.46 -0.1 4,309,790 + Psest_4130 0.46 -0.2 4,309,790 + Psest_4130 0.46 -0.4 4,309,790 + Psest_4130 0.46 -1.0 4,309,790 + Psest_4130 0.46 +1.2 4,309,790 + Psest_4130 0.46 +2.5 4,309,790 + Psest_4130 0.46 -1.5 4,309,790 + Psest_4130 0.46 -0.1 4,309,790 + Psest_4130 0.46 +0.1 4,309,790 + Psest_4130 0.46 +1.2 4,309,790 + Psest_4130 0.46 +0.0 4,309,790 + Psest_4130 0.46 -0.6 4,309,790 + Psest_4130 0.46 -0.1 4,309,790 + Psest_4130 0.46 -0.6 4,309,790 + Psest_4130 0.46 -0.7 4,309,790 + Psest_4130 0.46 +0.8 4,309,791 - Psest_4130 0.46 -1.8 4,309,791 - Psest_4130 0.46 -0.7 4,309,791 - Psest_4130 0.46 +0.4 4,309,791 - Psest_4130 0.46 -0.6 4,309,791 - Psest_4130 0.46 -0.4 4,309,791 - Psest_4130 0.46 -0.1 4,309,791 - Psest_4130 0.46 -0.2 4,309,791 - Psest_4130 0.46 -1.0 4,309,791 - Psest_4130 0.46 +0.7 4,309,791 - Psest_4130 0.46 +1.2 4,309,791 - Psest_4130 0.46 -0.6 4,309,791 - Psest_4130 0.46 +0.3 4,309,791 - Psest_4130 0.46 -0.3 4,309,791 - Psest_4130 0.46 +0.2 4,309,791 - Psest_4130 0.46 +0.0 4,309,791 - Psest_4130 0.46 +0.1 4,309,791 - Psest_4130 0.46 -0.0 4,309,791 - Psest_4130 0.46 +0.1 4,309,791 - Psest_4130 0.46 -0.9 4,309,791 - Psest_4130 0.46 +0.8 4,309,791 - Psest_4130 0.46 -1.0 4,309,791 - Psest_4130 0.46 +0.4 4,309,791 - Psest_4130 0.46 +0.9 4,309,961 + Psest_4130 0.60 -1.5 4,309,961 + Psest_4130 0.60 -0.2 4,309,961 + Psest_4130 0.60 +1.6 4,309,961 + Psest_4130 0.60 -2.1 4,309,961 + Psest_4130 0.60 -0.8 4,309,961 + Psest_4130 0.60 -1.7 4,309,961 + Psest_4130 0.60 +0.2 4,309,961 + Psest_4130 0.60 +1.6 4,309,961 + Psest_4130 0.60 +0.6 4,309,961 + Psest_4130 0.60 -2.4 4,309,962 - Psest_4130 0.60 +0.2 4,309,962 - Psest_4130 0.60 -0.9 4,309,962 - Psest_4130 0.60 +0.5 4,309,962 - Psest_4130 0.60 -0.3 4,309,962 - Psest_4130 0.60 +0.4 4,309,962 - Psest_4130 0.60 -0.7 4,309,962 - Psest_4130 0.60 -0.4 4,309,962 - Psest_4130 0.60 -0.8 4,309,962 - Psest_4130 0.60 -0.8 4,309,962 - Psest_4130 0.60 +1.2 4,309,962 - Psest_4130 0.60 -0.0 4,309,962 - Psest_4130 0.60 +0.6 4,309,962 - Psest_4130 0.60 -0.6 4,309,962 - Psest_4130 0.60 +0.2 4,309,962 - Psest_4130 0.60 +2.3 4,309,962 - Psest_4130 0.60 -0.2 4,309,962 - Psest_4130 0.60 -1.5 4,309,962 - Psest_4130 0.60 +1.2 4,309,962 - Psest_4130 0.60 -0.4 4,309,962 - Psest_4130 0.60 +0.4 4,309,962 - Psest_4130 0.60 -0.1 4,309,962 - Psest_4130 0.60 +1.4 4,309,962 - Psest_4130 0.60 -2.0 4,309,962 - Psest_4130 0.60 -0.8 4,309,962 - Psest_4130 0.60 +1.4 4,309,962 - Psest_4130 0.60 -1.3 4,309,962 - Psest_4130 0.60 +0.0 4,309,967 + Psest_4130 0.60 -0.2 4,309,967 + Psest_4130 0.60 +0.1 4,309,967 + Psest_4130 0.60 +0.9 4,309,967 + Psest_4130 0.60 +1.5 4,309,967 + Psest_4130 0.60 -1.2 4,309,968 - Psest_4130 0.60 +0.7 4,309,968 - Psest_4130 0.60 -0.4 4,309,968 - Psest_4130 0.60 +0.7 4,309,968 - Psest_4130 0.60 -0.2 4,309,968 - Psest_4130 0.60 +0.6 4,310,307 + Psest_4130 0.88 -1.9 4,310,307 + Psest_4130 0.88 +0.0 4,310,404 + -0.1 4,310,404 + -1.1 4,310,404 + -0.2 4,310,405 - +1.3 4,310,405 - +0.0 4,310,405 - -1.2 4,310,408 + -0.6 4,310,408 + +0.9 4,310,408 + -1.1 4,310,409 - +0.9 4,310,409 - +0.1 4,310,409 - +0.7 4,310,409 - +0.6 4,310,409 - -1.7 4,310,409 - -0.7 4,310,409 - -0.5 4,310,409 - +0.0 4,310,409 - -0.6 4,310,409 - +1.1 4,310,409 - +1.0 4,310,409 - +0.0 4,310,409 - +0.4 4,310,409 - +0.2 4,310,409 - +0.3 4,310,409 - +0.3 4,310,445 + -1.0 4,310,445 + -1.3 4,310,446 - -1.8 4,310,530 + -2.6 4,310,530 + +0.9 4,310,530 + +0.5 4,310,530 + -1.0 4,310,530 + -0.7 4,310,530 + -2.2 4,310,530 + +1.1 4,310,530 + +2.9 4,310,530 + +0.8 4,310,530 + +1.2 4,310,530 + -0.2 4,310,530 + -0.8 4,310,530 + +1.9 4,310,530 + +0.4 4,310,530 + +0.8 4,310,530 + -1.7 4,310,530 + +0.8 4,310,530 + -0.1 4,310,530 + +0.2 4,310,531 - -1.3 4,310,531 - -0.8 4,310,531 - -1.5 4,310,531 - -2.4 4,310,531 - -0.0 4,310,531 - -0.3 4,310,531 - +0.3 4,310,531 - -0.5 4,310,531 - +1.0 4,310,531 - +0.6 4,310,531 - +2.8 4,310,531 - -0.4 4,310,531 - +0.5 4,310,531 - -1.3 4,310,531 - +0.2 4,310,531 - +0.1 4,310,531 - +0.6 4,310,531 - -0.2 4,310,531 - +0.5 4,310,531 - -0.7 4,310,625 + +1.8 4,310,625 + +0.4 4,310,625 + +0.8 4,310,626 - -0.4 4,310,626 - -1.4 4,310,686 - -0.4 4,310,807 + -1.8 4,310,978 + Psest_4131 0.18 -0.8 4,310,979 - Psest_4131 0.18 -1.1 4,310,979 - Psest_4131 0.18 -3.1 4,311,053 + Psest_4131 0.22 +2.1 4,311,053 + Psest_4131 0.22 +0.6 4,311,053 + Psest_4131 0.22 -0.9 4,311,053 + Psest_4131 0.22 -0.3 4,311,053 + Psest_4131 0.22 -0.5 4,311,054 - Psest_4131 0.23 -0.6 4,311,054 - Psest_4131 0.23 +1.0 4,311,054 - Psest_4131 0.23 -1.3 4,311,068 + Psest_4131 0.23 -1.2 4,311,513 + Psest_4131 0.49 -0.9 4,311,513 + Psest_4131 0.49 +1.0 4,311,514 - Psest_4131 0.49 -0.6 4,311,514 - Psest_4131 0.49 -0.3 4,311,514 - Psest_4131 0.49 -0.6 4,311,612 - Psest_4131 0.54 -0.8 4,311,981 + Psest_4131 0.75 -1.3 4,312,384 + +1.0 4,312,465 + -0.8 4,312,465 + +0.6 4,312,465 + -0.5 4,312,465 + +0.9 4,312,466 - +0.7 4,312,466 - -0.9 4,312,743 + Psest_4132 0.22 -0.1 4,312,907 + Psest_4132 0.34 +1.3 4,312,908 - Psest_4132 0.34 +2.3 4,313,255 - Psest_4132 0.60 +1.4 4,313,384 + Psest_4132 0.69 -1.2 4,313,384 + Psest_4132 0.69 -1.0 4,313,385 - Psest_4132 0.69 -0.4 4,313,385 - Psest_4132 0.69 -0.9
Or see this region's nucleotide sequence