Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0305

Experiment: Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 5 vol%
323,552	+		Psest_0303	0.52	-1.0
323,552	+		Psest_0303	0.52	-0.4
323,552	+		Psest_0303	0.52	-1.9
323,552	+		Psest_0303	0.52	+1.3
323,552	+		Psest_0303	0.52	-0.8
323,552	+		Psest_0303	0.52	-1.7
323,552	+		Psest_0303	0.52	-0.3
323,552	+		Psest_0303	0.52	+0.8
323,751	-		Psest_0303	0.71	+2.2
323,751	-		Psest_0303	0.71	+0.5
323,751	-		Psest_0303	0.71	+0.3
323,861	+		Psest_0303	0.81	-0.7
323,861	+		Psest_0303	0.81	+0.9
323,861	+		Psest_0303	0.81	+0.7
323,861	+		Psest_0303	0.81	+1.5
323,861	+		Psest_0303	0.81	+2.6
323,862	-		Psest_0303	0.81	-0.9
323,862	-		Psest_0303	0.81	+1.9
323,862	-		Psest_0303	0.81	-0.5
323,862	-		Psest_0303	0.81	-0.9
323,862	-		Psest_0303	0.81	+1.2
323,862	-		Psest_0303	0.81	-1.1
323,862	-		Psest_0303	0.81	-0.2
323,862	-		Psest_0303	0.81	-1.6
323,862	-		Psest_0303	0.81	+0.1
323,862	-		Psest_0303	0.81	-0.7
323,960	+				+1.2
323,960	+				-1.3
323,960	+				-2.3
323,960	+				-1.3
323,961	-				+0.6
323,961	-				-1.4
323,961	-				-1.6
323,961	-				-0.1
323,961	-				-0.6
324,049	+				+0.4
324,050	-				+0.3
325,053	+		Psest_0305	0.70	-0.5
325,053	+		Psest_0305	0.70	+0.4
325,053	+		Psest_0305	0.70	+1.7
325,053	+		Psest_0305	0.70	-0.4
325,054	-		Psest_0305	0.70	-2.8
325,054	-		Psest_0305	0.70	-0.8
325,054	-		Psest_0305	0.70	-0.5
325,054	-		Psest_0305	0.70	-1.3
325,190	+		Psest_0305	0.89	-1.2
325,190	+		Psest_0305	0.89	-1.3
325,190	+		Psest_0305	0.89	+0.4
325,190	+		Psest_0305	0.89	+1.1
325,191	-		Psest_0305	0.89	-2.2
325,191	-		Psest_0305	0.89	-1.9
325,275	+				-0.5
325,276	-				+0.0
325,276	-				-0.8
325,276	-				-0.0
325,303	+				+0.1
325,331	+				-0.3
325,331	+				-0.5
325,344	+				-0.9
325,344	+				+1.3
325,345	-				-2.2
325,345	-				+1.9
325,419	+				-1.2
325,484	+				-2.0
325,499	+		Psest_0306	0.10	-0.9
325,499	+		Psest_0306	0.10	-0.5
325,499	+		Psest_0306	0.10	-2.0
325,500	-		Psest_0306	0.10	-0.8
325,500	-		Psest_0306	0.10	-1.6
325,553	+		Psest_0306	0.14	-0.9
325,554	-		Psest_0306	0.14	-0.1
325,796	+		Psest_0306	0.31	-2.1
325,796	+		Psest_0306	0.31	-0.9
325,796	+		Psest_0306	0.31	-1.6
325,796	+		Psest_0306	0.31	-2.6
325,797	-		Psest_0306	0.31	-1.7
325,797	-		Psest_0306	0.31	-1.8
325,797	-		Psest_0306	0.31	-1.0
325,797	-		Psest_0306	0.31	-1.8
325,841	+		Psest_0306	0.34	+0.7
325,841	+		Psest_0306	0.34	-0.1
325,842	-		Psest_0306	0.35	-1.5
325,853	+		Psest_0306	0.35	-1.7
325,854	-		Psest_0306	0.35	-2.2
325,854	-		Psest_0306	0.35	-1.5
325,854	-		Psest_0306	0.35	-0.5
325,854	-		Psest_0306	0.35	+0.0
326,018	+		Psest_0306	0.47	-2.2
326,063	+		Psest_0306	0.50	-1.0
326,063	+		Psest_0306	0.50	-2.5
326,063	+		Psest_0306	0.50	-0.1
326,063	+		Psest_0306	0.50	-2.1
326,063	+		Psest_0306	0.50	-2.2
326,063	+		Psest_0306	0.50	-0.4
326,063	+		Psest_0306	0.50	-1.3
326,064	-		Psest_0306	0.50	-0.2
326,064	-		Psest_0306	0.50	-0.6
326,064	-		Psest_0306	0.50	-2.1
326,064	-		Psest_0306	0.50	-0.9
326,064	-		Psest_0306	0.50	+0.1
326,064	-		Psest_0306	0.50	-0.1
326,064	-		Psest_0306	0.50	-3.1
326,255	+		Psest_0306	0.64	-0.3
326,255	+		Psest_0306	0.64	+0.9
326,255	+		Psest_0306	0.64	-2.2
326,255	+		Psest_0306	0.64	-1.5
326,255	+		Psest_0306	0.64	-0.7
326,255	+		Psest_0306	0.64	-0.9
326,255	+		Psest_0306	0.64	-0.1
326,255	+		Psest_0306	0.64	-0.9
326,256	-		Psest_0306	0.64	-2.1
326,256	-		Psest_0306	0.64	-1.4
326,256	-		Psest_0306	0.64	+0.4
326,256	-		Psest_0306	0.64	-0.5
326,256	-		Psest_0306	0.64	-2.7
326,256	-		Psest_0306	0.64	-1.2
326,256	-		Psest_0306	0.64	-1.6
326,256	-		Psest_0306	0.64	+1.5