Experiment: Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4349 and Psest_4350 are separated by 2 nucleotides Psest_4350 and Psest_4352 are separated by 293 nucleotides
Psest_4349: Psest_4349 - glucosamine--fructose-6-phosphate aminotransferase (isomerizing), at 4,549,153 to 4,551,003
_4349
Psest_4350: Psest_4350 - Transcriptional regulators of sugar metabolism, at 4,551,006 to 4,551,788
_4350
Psest_4352: Psest_4352 - UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase, at 4,552,082 to 4,553,440
_4352
Position (kb)
4551
4552 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 4551.226 kb on - strand, within Psest_4350 at 4551.226 kb on - strand, within Psest_4350 at 4551.226 kb on - strand, within Psest_4350 at 4551.243 kb on - strand, within Psest_4350 at 4551.560 kb on - strand, within Psest_4350 at 4551.560 kb on - strand, within Psest_4350 at 4551.560 kb on - strand, within Psest_4350 at 4551.576 kb on + strand, within Psest_4350 at 4551.576 kb on + strand, within Psest_4350 at 4551.576 kb on + strand, within Psest_4350 at 4551.576 kb on + strand, within Psest_4350 at 4551.576 kb on + strand, within Psest_4350 at 4551.577 kb on - strand, within Psest_4350 at 4551.577 kb on - strand, within Psest_4350 at 4551.577 kb on - strand, within Psest_4350 at 4551.793 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Dimethyl Sulfoxide 5 vol% remove 4,551,226 - Psest_4350 0.28 +0.9 4,551,226 - Psest_4350 0.28 -2.3 4,551,226 - Psest_4350 0.28 -1.6 4,551,243 - Psest_4350 0.30 +0.2 4,551,560 - Psest_4350 0.71 +0.5 4,551,560 - Psest_4350 0.71 +0.2 4,551,560 - Psest_4350 0.71 -1.6 4,551,576 + Psest_4350 0.73 -2.2 4,551,576 + Psest_4350 0.73 -2.9 4,551,576 + Psest_4350 0.73 -2.3 4,551,576 + Psest_4350 0.73 -2.6 4,551,576 + Psest_4350 0.73 -2.2 4,551,577 - Psest_4350 0.73 +0.1 4,551,577 - Psest_4350 0.73 +0.3 4,551,577 - Psest_4350 0.73 +1.2 4,551,793 - -1.0
Or see this region's nucleotide sequence