Experiment: Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4314 and Psest_4315 overlap by 1 nucleotides Psest_4315 and Psest_4316 are separated by 58 nucleotides
Psest_4314: Psest_4314 - ABC-type metal ion transport system, ATPase component, at 4,514,294 to 4,515,301
_4314
Psest_4315: Psest_4315 - ABC-type metal ion transport system, permease component, at 4,515,301 to 4,515,978
_4315
Psest_4316: Psest_4316 - ABC-type metal ion transport system, periplasmic component/surface antigen, at 4,516,037 to 4,516,807
_4316
Position (kb)
4515
4516 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4514.705 kb on + strand, within Psest_4314 at 4515.116 kb on + strand, within Psest_4314 at 4515.116 kb on + strand, within Psest_4314 at 4515.116 kb on + strand, within Psest_4314 at 4515.116 kb on + strand, within Psest_4314 at 4515.116 kb on + strand, within Psest_4314 at 4515.116 kb on + strand, within Psest_4314 at 4515.117 kb on - strand, within Psest_4314 at 4515.117 kb on - strand, within Psest_4314 at 4515.117 kb on - strand, within Psest_4314 at 4515.117 kb on - strand, within Psest_4314 at 4515.117 kb on - strand, within Psest_4314 at 4515.117 kb on - strand, within Psest_4314 at 4515.117 kb on - strand, within Psest_4314 at 4515.161 kb on + strand, within Psest_4314 at 4515.162 kb on - strand, within Psest_4314 at 4515.207 kb on - strand at 4515.315 kb on + strand at 4515.315 kb on + strand at 4515.316 kb on - strand at 4515.481 kb on + strand, within Psest_4315 at 4515.481 kb on + strand, within Psest_4315 at 4515.668 kb on + strand, within Psest_4315 at 4515.668 kb on + strand, within Psest_4315 at 4515.668 kb on + strand, within Psest_4315 at 4515.802 kb on + strand, within Psest_4315 at 4515.803 kb on - strand, within Psest_4315 at 4515.803 kb on - strand, within Psest_4315 at 4515.976 kb on + strand at 4515.976 kb on + strand at 4516.202 kb on + strand, within Psest_4316 at 4516.202 kb on + strand, within Psest_4316 at 4516.203 kb on - strand, within Psest_4316 at 4516.203 kb on - strand, within Psest_4316 at 4516.268 kb on + strand, within Psest_4316 at 4516.346 kb on + strand, within Psest_4316 at 4516.346 kb on + strand, within Psest_4316 at 4516.604 kb on + strand, within Psest_4316 at 4516.604 kb on + strand, within Psest_4316 at 4516.605 kb on - strand, within Psest_4316 at 4516.778 kb on + strand at 4516.779 kb on - strand at 4516.871 kb on + strand at 4516.872 kb on - strand at 4516.910 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Dimethyl Sulfoxide 5 vol% remove 4,514,705 + Psest_4314 0.41 +1.4 4,515,116 + Psest_4314 0.82 +0.5 4,515,116 + Psest_4314 0.82 +0.4 4,515,116 + Psest_4314 0.82 +0.2 4,515,116 + Psest_4314 0.82 +3.1 4,515,116 + Psest_4314 0.82 +0.4 4,515,116 + Psest_4314 0.82 +2.9 4,515,117 - Psest_4314 0.82 -0.9 4,515,117 - Psest_4314 0.82 -0.1 4,515,117 - Psest_4314 0.82 -1.0 4,515,117 - Psest_4314 0.82 +0.3 4,515,117 - Psest_4314 0.82 -1.7 4,515,117 - Psest_4314 0.82 -1.0 4,515,117 - Psest_4314 0.82 +1.7 4,515,161 + Psest_4314 0.86 -0.4 4,515,162 - Psest_4314 0.86 -1.8 4,515,207 - +0.7 4,515,315 + -0.6 4,515,315 + +0.6 4,515,316 - +0.2 4,515,481 + Psest_4315 0.27 +3.5 4,515,481 + Psest_4315 0.27 -2.1 4,515,668 + Psest_4315 0.54 -1.0 4,515,668 + Psest_4315 0.54 -2.1 4,515,668 + Psest_4315 0.54 +0.2 4,515,802 + Psest_4315 0.74 +0.4 4,515,803 - Psest_4315 0.74 +0.2 4,515,803 - Psest_4315 0.74 +1.4 4,515,976 + +0.5 4,515,976 + +0.4 4,516,202 + Psest_4316 0.21 -2.2 4,516,202 + Psest_4316 0.21 -0.5 4,516,203 - Psest_4316 0.22 +2.6 4,516,203 - Psest_4316 0.22 +1.1 4,516,268 + Psest_4316 0.30 +1.7 4,516,346 + Psest_4316 0.40 -0.7 4,516,346 + Psest_4316 0.40 +0.3 4,516,604 + Psest_4316 0.74 +0.3 4,516,604 + Psest_4316 0.74 -0.8 4,516,605 - Psest_4316 0.74 +0.9 4,516,778 + -0.2 4,516,779 - +0.5 4,516,871 + +1.2 4,516,872 - -1.6 4,516,910 + -1.4
Or see this region's nucleotide sequence