Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_4003

Experiment: Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 5 vol%
4,174,942	+		Psest_4002	0.56	-0.1
4,175,506	-				+1.8
4,175,506	-				+1.3
4,175,506	-				+0.4
4,175,506	-				-0.4
4,175,506	-				+2.0
4,175,620	-		Psest_4003	0.12	+0.6
4,175,845	-		Psest_4003	0.45	+1.7
4,175,845	-		Psest_4003	0.45	+1.9
4,175,845	-		Psest_4003	0.45	-0.2
4,175,845	-		Psest_4003	0.45	+0.9
4,175,845	-		Psest_4003	0.45	+1.1
4,175,845	-		Psest_4003	0.45	+1.1
4,175,943	-		Psest_4003	0.60	-0.5
4,175,943	-		Psest_4003	0.60	+2.0
4,175,943	-		Psest_4003	0.60	+1.8
4,175,943	-		Psest_4003	0.60	-0.5
4,175,943	-		Psest_4003	0.60	+1.0
4,176,152	-				+0.8
4,176,249	-				+0.7
4,176,249	-				+0.6
4,176,249	-				-0.7
4,176,249	-				+1.2
4,176,249	-				+1.9
4,176,249	-				+0.5
4,176,249	-				+1.1
4,176,249	-				+0.6
4,176,249	-				-1.2
4,176,250	+				+2.4
4,176,250	+				+0.6
4,176,309	+				+0.8
4,176,309	+				+0.4
4,176,309	+				+0.9
4,176,309	+				+1.9
4,176,309	+				+0.5
4,176,309	+				+1.1
4,176,309	+				+0.7
4,176,310	-				+0.6
4,176,353	+				-1.2
4,176,353	+				+1.3
4,176,451	+				+0.5
4,176,451	+				-0.1
4,176,452	-				-0.3
4,176,452	-				-1.8
4,176,454	+				+0.1
4,176,455	-				+1.3
4,176,455	-				+2.2
4,176,592	+		Psest_4004	0.19	+1.2
4,176,592	+		Psest_4004	0.19	-0.1
4,176,593	-		Psest_4004	0.19	-1.8
4,176,952	+		Psest_4004	0.46	-0.1
4,176,953	-		Psest_4004	0.46	-1.2
4,177,063	+		Psest_4004	0.54	-0.3