Experiment: Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3356 and Psest_3357 are separated by 67 nucleotides Psest_3357 and Psest_3358 overlap by 4 nucleotides Psest_3358 and Psest_3359 are separated by 18 nucleotides
Psest_3356: Psest_3356 - D-fructose-responsive transcription factor, at 3,527,447 to 3,528,436
_3356
Psest_3357: Psest_3357 - Predicted pyrophosphatase, at 3,528,504 to 3,528,809
_3357
Psest_3358: Psest_3358 - Methyltransferase domain., at 3,528,806 to 3,529,555
_3358
Psest_3359: Psest_3359 - hypothetical protein, at 3,529,574 to 3,530,185
_3359
Position (kb)
3528
3529 Strain fitness (log2 ratio)
-2
-1
0
1 at 3527.672 kb on + strand, within Psest_3356 at 3527.672 kb on + strand, within Psest_3356 at 3527.846 kb on + strand, within Psest_3356 at 3528.185 kb on + strand, within Psest_3356 at 3528.185 kb on + strand, within Psest_3356 at 3528.185 kb on + strand, within Psest_3356 at 3528.185 kb on + strand, within Psest_3356 at 3528.186 kb on - strand, within Psest_3356 at 3528.186 kb on - strand, within Psest_3356 at 3528.186 kb on - strand, within Psest_3356 at 3528.186 kb on - strand, within Psest_3356 at 3528.186 kb on - strand, within Psest_3356 at 3528.717 kb on + strand, within Psest_3357 at 3528.717 kb on + strand, within Psest_3357 at 3528.718 kb on - strand, within Psest_3357 at 3528.718 kb on - strand, within Psest_3357 at 3528.718 kb on - strand, within Psest_3357 at 3528.718 kb on - strand, within Psest_3357 at 3528.718 kb on - strand, within Psest_3357 at 3528.968 kb on - strand, within Psest_3358 at 3528.968 kb on - strand, within Psest_3358 at 3529.238 kb on + strand, within Psest_3358 at 3529.238 kb on + strand, within Psest_3358 at 3529.238 kb on + strand, within Psest_3358 at 3529.238 kb on + strand, within Psest_3358 at 3529.239 kb on - strand, within Psest_3358 at 3529.239 kb on - strand, within Psest_3358 at 3529.239 kb on - strand, within Psest_3358 at 3529.239 kb on - strand, within Psest_3358 at 3529.259 kb on + strand, within Psest_3358 at 3529.260 kb on - strand, within Psest_3358 at 3529.260 kb on - strand, within Psest_3358 at 3529.307 kb on + strand, within Psest_3358 at 3529.308 kb on - strand, within Psest_3358 at 3529.308 kb on - strand, within Psest_3358 at 3529.308 kb on - strand, within Psest_3358 at 3529.308 kb on - strand, within Psest_3358 at 3529.427 kb on + strand, within Psest_3358 at 3529.427 kb on + strand, within Psest_3358 at 3529.427 kb on + strand, within Psest_3358 at 3529.427 kb on + strand, within Psest_3358 at 3529.427 kb on + strand, within Psest_3358 at 3529.427 kb on + strand, within Psest_3358 at 3529.427 kb on + strand, within Psest_3358 at 3529.427 kb on + strand, within Psest_3358 at 3529.428 kb on - strand, within Psest_3358 at 3529.428 kb on - strand, within Psest_3358 at 3529.428 kb on - strand, within Psest_3358 at 3529.428 kb on - strand, within Psest_3358 at 3529.428 kb on - strand, within Psest_3358 at 3529.428 kb on - strand, within Psest_3358 at 3529.428 kb on - strand, within Psest_3358 at 3529.428 kb on - strand, within Psest_3358 at 3529.428 kb on - strand, within Psest_3358 at 3529.428 kb on - strand, within Psest_3358 at 3529.587 kb on + strand at 3529.588 kb on - strand at 3529.640 kb on + strand, within Psest_3359 at 3529.733 kb on + strand, within Psest_3359 at 3529.733 kb on + strand, within Psest_3359
Per-strain Table
Position Strand Gene LocusTag Fraction Dimethyl Sulfoxide 5 vol% remove 3,527,672 + Psest_3356 0.23 +0.1 3,527,672 + Psest_3356 0.23 +0.3 3,527,846 + Psest_3356 0.40 +0.2 3,528,185 + Psest_3356 0.75 -0.1 3,528,185 + Psest_3356 0.75 -0.8 3,528,185 + Psest_3356 0.75 +0.3 3,528,185 + Psest_3356 0.75 -1.0 3,528,186 - Psest_3356 0.75 -0.3 3,528,186 - Psest_3356 0.75 -0.2 3,528,186 - Psest_3356 0.75 +1.6 3,528,186 - Psest_3356 0.75 +0.5 3,528,186 - Psest_3356 0.75 +0.1 3,528,717 + Psest_3357 0.70 -2.6 3,528,717 + Psest_3357 0.70 -0.7 3,528,718 - Psest_3357 0.70 +0.5 3,528,718 - Psest_3357 0.70 -1.9 3,528,718 - Psest_3357 0.70 -1.7 3,528,718 - Psest_3357 0.70 +0.5 3,528,718 - Psest_3357 0.70 -1.0 3,528,968 - Psest_3358 0.22 +0.8 3,528,968 - Psest_3358 0.22 -0.7 3,529,238 + Psest_3358 0.58 -1.6 3,529,238 + Psest_3358 0.58 -0.7 3,529,238 + Psest_3358 0.58 -0.1 3,529,238 + Psest_3358 0.58 +0.4 3,529,239 - Psest_3358 0.58 -1.9 3,529,239 - Psest_3358 0.58 +1.6 3,529,239 - Psest_3358 0.58 +0.3 3,529,239 - Psest_3358 0.58 -0.8 3,529,259 + Psest_3358 0.60 -0.8 3,529,260 - Psest_3358 0.61 -0.9 3,529,260 - Psest_3358 0.61 +0.8 3,529,307 + Psest_3358 0.67 -0.6 3,529,308 - Psest_3358 0.67 +0.4 3,529,308 - Psest_3358 0.67 -0.7 3,529,308 - Psest_3358 0.67 -1.6 3,529,308 - Psest_3358 0.67 -1.1 3,529,427 + Psest_3358 0.83 +0.8 3,529,427 + Psest_3358 0.83 -1.8 3,529,427 + Psest_3358 0.83 +0.2 3,529,427 + Psest_3358 0.83 -1.1 3,529,427 + Psest_3358 0.83 +0.7 3,529,427 + Psest_3358 0.83 -0.6 3,529,427 + Psest_3358 0.83 +0.0 3,529,427 + Psest_3358 0.83 -0.6 3,529,428 - Psest_3358 0.83 -0.6 3,529,428 - Psest_3358 0.83 -0.9 3,529,428 - Psest_3358 0.83 -0.3 3,529,428 - Psest_3358 0.83 -1.6 3,529,428 - Psest_3358 0.83 +1.4 3,529,428 - Psest_3358 0.83 +1.3 3,529,428 - Psest_3358 0.83 +0.9 3,529,428 - Psest_3358 0.83 -1.7 3,529,428 - Psest_3358 0.83 +0.7 3,529,428 - Psest_3358 0.83 -0.4 3,529,587 + +0.0 3,529,588 - -1.4 3,529,640 + Psest_3359 0.11 +1.7 3,529,733 + Psest_3359 0.26 +0.5 3,529,733 + Psest_3359 0.26 -0.0
Or see this region's nucleotide sequence