Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3339

Experiment: Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 5 vol%
3,502,447	+		Psest_3337	0.77	-0.3
3,502,447	+		Psest_3337	0.77	-0.8
3,502,447	+		Psest_3337	0.77	-2.2
3,502,448	-		Psest_3337	0.77	-0.3
3,502,448	-		Psest_3337	0.77	-1.2
3,502,502	+		Psest_3337	0.83	+0.3
3,502,503	-		Psest_3337	0.83	+0.6
3,502,503	-		Psest_3337	0.83	-0.7
3,502,551	-		Psest_3337	0.88	+1.5
3,502,678	+				-0.2
3,502,678	+				+0.8
3,502,678	+				+0.6
3,502,678	+				+0.3
3,502,678	+				+0.4
3,502,678	+				+0.1
3,502,678	+				+0.1
3,502,678	+				-1.6
3,502,679	-				+0.8
3,502,679	-				-1.7
3,502,679	-				+0.3
3,502,679	-				-1.5
3,502,679	-				-1.3
3,502,679	-				-2.2
3,502,679	-				-0.9
3,502,695	+				-1.1
3,502,695	+				+3.6
3,502,696	-				+0.0
3,502,885	-		Psest_3338	0.20	-0.7
3,503,004	-		Psest_3338	0.42	+0.4
3,503,004	-		Psest_3338	0.42	+0.3
3,503,167	-		Psest_3338	0.71	+1.6
3,503,429	+				-1.6
3,503,429	+				-0.3
3,503,429	+				-0.7
3,503,430	-				+1.4
3,503,430	-				-1.7
3,503,733	-		Psest_3339	0.29	+0.0
3,503,767	+		Psest_3339	0.32	+0.4
3,503,920	-		Psest_3339	0.44	+0.2
3,503,921	+		Psest_3339	0.44	-1.3
3,503,922	-		Psest_3339	0.44	-0.5
3,504,216	+		Psest_3339	0.68	+2.5
3,504,216	+		Psest_3339	0.68	-0.5
3,504,216	+		Psest_3339	0.68	-2.2
3,504,217	-		Psest_3339	0.68	-1.3
3,504,217	-		Psest_3339	0.68	+0.3
3,504,217	-		Psest_3339	0.68	+0.0
3,504,219	-		Psest_3339	0.68	+1.8
3,504,255	-		Psest_3339	0.71	-0.9
3,504,255	-		Psest_3339	0.71	-1.6
3,504,299	+		Psest_3339	0.74	-0.2
3,504,302	+		Psest_3339	0.75	+1.2
3,504,303	-		Psest_3339	0.75	+1.2
3,504,303	-		Psest_3339	0.75	-1.6
3,504,338	+		Psest_3339	0.78	+1.5
3,504,338	+		Psest_3339	0.78	+0.9
3,504,338	+		Psest_3339	0.78	+2.3
3,504,338	+		Psest_3339	0.78	+1.1
3,504,338	+		Psest_3339	0.78	-0.1
3,504,339	-		Psest_3339	0.78	+2.8
3,504,339	-		Psest_3339	0.78	-0.2
3,504,387	-		Psest_3339	0.81	-0.1
3,504,614	+				+1.8
3,504,614	+				-2.2
3,504,614	+				+0.3
3,504,614	+				-0.9
3,504,615	-				-1.4
3,504,615	-				-2.1
3,504,615	-				+0.5
3,504,615	-				-3.7
3,504,615	-				+0.7
3,504,615	-				+0.2
3,504,615	-				-0.4
3,504,615	-				+0.2
3,504,615	-				-0.0
3,504,643	+				+0.9
3,504,644	-				-3.2
3,504,644	-				+0.3
3,504,644	-				-0.1
3,504,723	-				-2.7
3,504,928	+		Psest_3340	0.22	-0.2
3,504,928	+		Psest_3340	0.22	+0.8
3,504,929	-		Psest_3340	0.22	-0.8
3,504,929	-		Psest_3340	0.22	-0.5
3,505,054	+		Psest_3340	0.40	-1.6
3,505,063	+		Psest_3340	0.41	+1.3
3,505,188	+		Psest_3340	0.59	-0.1
3,505,192	+		Psest_3340	0.60	+2.4
3,505,192	+		Psest_3340	0.60	-1.1
3,505,192	+		Psest_3340	0.60	-0.9
3,505,192	+		Psest_3340	0.60	-0.7
3,505,192	+		Psest_3340	0.60	-0.1
3,505,192	+		Psest_3340	0.60	-0.0
3,505,192	+		Psest_3340	0.60	+0.8
3,505,192	+		Psest_3340	0.60	-1.3
3,505,193	-		Psest_3340	0.60	-1.8
3,505,193	-		Psest_3340	0.60	-0.5
3,505,193	-		Psest_3340	0.60	-1.2
3,505,193	-		Psest_3340	0.60	+2.6
3,505,193	-		Psest_3340	0.60	-0.3
3,505,193	-		Psest_3340	0.60	-1.4
3,505,193	-		Psest_3340	0.60	+1.0
3,505,193	-		Psest_3340	0.60	-0.1
3,505,193	-		Psest_3340	0.60	+2.3
3,505,193	-		Psest_3340	0.60	+0.6
3,505,309	+		Psest_3340	0.76	+1.2
3,505,326	-		Psest_3340	0.79	-1.7
3,505,326	-		Psest_3340	0.79	-0.6
3,505,504	+				+0.5
3,505,504	+				+2.1
3,505,504	+				-0.4
3,505,504	+				-1.2
3,505,504	+				-1.0
3,505,504	+				+0.4
3,505,505	-				+1.0
3,505,508	+				+0.8
3,505,509	-				-0.2
3,505,509	-				+0.9
3,505,509	-				+1.5
3,505,509	-				+0.8
3,505,509	-				-0.1
3,505,509	-				+0.1
3,505,509	-				-1.4
3,505,509	-				-0.7
3,505,517	-				-1.1
3,505,537	-				-0.2
3,505,548	-				-1.7