Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_3216

Experiment: Dimethyl Sulfoxide 5 vol%

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Dimethyl Sulfoxide 5 vol%
3,384,777	+		Psest_3215	0.29	+0.7
3,384,954	+		Psest_3215	0.49	+0.4
3,384,967	-		Psest_3215	0.50	+2.2
3,385,020	+		Psest_3215	0.56	-0.0
3,385,118	-		Psest_3215	0.67	+1.8
3,385,282	+		Psest_3215	0.85	+0.5
3,385,308	+		Psest_3215	0.87	+1.0
3,385,308	+		Psest_3215	0.87	-0.5
3,385,308	+		Psest_3215	0.87	-0.2
3,385,308	+		Psest_3215	0.87	+1.5
3,385,308	+		Psest_3215	0.87	+1.3
3,385,308	+		Psest_3215	0.87	-0.6
3,385,309	-		Psest_3215	0.88	-0.3
3,385,449	+				+0.0
3,385,449	+				+1.5
3,385,449	+				+0.1
3,385,449	+				+0.7
3,385,449	+				+1.0
3,385,449	+				+0.9
3,385,450	-				+2.3
3,385,450	-				+0.7
3,385,450	-				+1.4
3,385,542	-				+0.3
3,385,624	+				+1.3
3,385,625	-				+0.8
3,385,693	+		Psest_3216	0.12	+1.2
3,385,716	+		Psest_3216	0.13	+1.6
3,385,717	-		Psest_3216	0.13	+1.5
3,385,717	-		Psest_3216	0.13	+0.9
3,385,717	-		Psest_3216	0.13	+1.2
3,385,717	-		Psest_3216	0.13	+1.5
3,385,717	-		Psest_3216	0.13	+0.4
3,385,732	-		Psest_3216	0.13	+1.6
3,385,732	-		Psest_3216	0.13	+1.3
3,385,825	+		Psest_3216	0.18	+1.9
3,385,825	+		Psest_3216	0.18	+0.7
3,385,825	+		Psest_3216	0.18	+1.0
3,385,825	+		Psest_3216	0.18	+1.3
3,385,825	+		Psest_3216	0.18	+1.5
3,385,826	-		Psest_3216	0.18	+1.1
3,385,869	+		Psest_3216	0.20	+1.5
3,386,289	+		Psest_3216	0.40	+1.4
3,386,289	+		Psest_3216	0.40	+2.3
3,386,289	+		Psest_3216	0.40	+0.4
3,386,289	+		Psest_3216	0.40	+3.7
3,386,289	+		Psest_3216	0.40	+1.3
3,386,289	+		Psest_3216	0.40	+0.9
3,386,289	+		Psest_3216	0.40	+1.2
3,386,289	+		Psest_3216	0.40	+0.8
3,386,289	+		Psest_3216	0.40	+0.7
3,386,289	+		Psest_3216	0.40	+1.3
3,386,289	+		Psest_3216	0.40	+1.4
3,386,289	+		Psest_3216	0.40	+1.4
3,386,290	-		Psest_3216	0.40	+0.2
3,386,290	-		Psest_3216	0.40	+1.5
3,386,290	-		Psest_3216	0.40	+0.6
3,386,290	-		Psest_3216	0.40	+2.0
3,386,290	-		Psest_3216	0.40	+1.0
3,386,290	-		Psest_3216	0.40	+1.1
3,386,362	+		Psest_3216	0.43	+1.0
3,386,625	+		Psest_3216	0.56	+0.9
3,386,625	+		Psest_3216	0.56	+1.4
3,386,625	+		Psest_3216	0.56	+1.7
3,386,625	+		Psest_3216	0.56	+1.6
3,386,625	+		Psest_3216	0.56	+3.9
3,386,625	+		Psest_3216	0.56	+1.2
3,386,625	+		Psest_3216	0.56	+1.1
3,386,625	+		Psest_3216	0.56	+0.0
3,386,625	+		Psest_3216	0.56	+1.2
3,386,625	+		Psest_3216	0.56	+1.4
3,386,625	+		Psest_3216	0.56	+0.9
3,386,625	+		Psest_3216	0.56	+1.5
3,386,625	+		Psest_3216	0.56	+1.2
3,386,625	+		Psest_3216	0.56	+1.8
3,386,625	+		Psest_3216	0.56	+0.7
3,386,625	+		Psest_3216	0.56	+1.3
3,386,625	+		Psest_3216	0.56	+1.5
3,386,625	+		Psest_3216	0.56	+1.7
3,386,625	+		Psest_3216	0.56	+0.8
3,386,625	+		Psest_3216	0.56	+0.8
3,386,625	+		Psest_3216	0.56	+0.5
3,386,625	+		Psest_3216	0.56	+1.5
3,386,625	+		Psest_3216	0.56	+1.0
3,386,626	-		Psest_3216	0.56	+0.6
3,386,626	-		Psest_3216	0.56	+0.2
3,386,626	-		Psest_3216	0.56	+1.0
3,386,626	-		Psest_3216	0.56	+2.6
3,386,626	-		Psest_3216	0.56	+0.1
3,386,626	-		Psest_3216	0.56	+2.0
3,386,626	-		Psest_3216	0.56	+1.3
3,386,626	-		Psest_3216	0.56	+1.6
3,386,626	-		Psest_3216	0.56	+1.2
3,386,626	-		Psest_3216	0.56	+1.7
3,386,626	-		Psest_3216	0.56	+0.9
3,386,626	-		Psest_3216	0.56	+1.2
3,386,626	-		Psest_3216	0.56	+1.1
3,386,750	+		Psest_3216	0.62	+0.7
3,386,750	+		Psest_3216	0.62	+0.8
3,386,750	+		Psest_3216	0.62	+1.1
3,386,750	+		Psest_3216	0.62	+2.6
3,386,750	+		Psest_3216	0.62	+1.3
3,386,750	+		Psest_3216	0.62	+1.2
3,386,750	+		Psest_3216	0.62	+1.5
3,386,750	+		Psest_3216	0.62	+2.2
3,386,750	+		Psest_3216	0.62	+1.0
3,386,751	-		Psest_3216	0.62	+1.4
3,386,751	-		Psest_3216	0.62	+0.4
3,386,751	-		Psest_3216	0.62	+0.7
3,386,751	-		Psest_3216	0.62	+1.1
3,386,751	-		Psest_3216	0.62	+1.3
3,386,751	-		Psest_3216	0.62	+1.0
3,386,751	-		Psest_3216	0.62	+0.6
3,386,751	-		Psest_3216	0.62	+1.7
3,386,751	-		Psest_3216	0.62	+1.4
3,386,751	-		Psest_3216	0.62	+1.1
3,386,751	-		Psest_3216	0.62	+1.1
3,386,751	-		Psest_3216	0.62	+1.2
3,386,776	+		Psest_3216	0.63	+1.3
3,386,776	+		Psest_3216	0.63	+1.7
3,386,776	+		Psest_3216	0.63	+1.2
3,386,776	+		Psest_3216	0.63	+0.8
3,386,776	+		Psest_3216	0.63	+0.7
3,386,776	+		Psest_3216	0.63	+0.7
3,386,777	-		Psest_3216	0.63	+1.1
3,386,777	-		Psest_3216	0.63	+1.4
3,386,777	-		Psest_3216	0.63	+1.4
3,386,864	-		Psest_3216	0.67	+2.5
3,386,890	-		Psest_3216	0.68	+1.4
3,386,916	+		Psest_3216	0.70	+0.1
3,386,916	+		Psest_3216	0.70	+1.1
3,386,916	+		Psest_3216	0.70	-1.6
3,387,045	+		Psest_3216	0.76	+0.0
3,387,045	+		Psest_3216	0.76	+2.0
3,387,045	+		Psest_3216	0.76	+1.7
3,387,046	-		Psest_3216	0.76	+1.0
3,387,046	-		Psest_3216	0.76	+0.9
3,387,046	-		Psest_3216	0.76	-0.1
3,387,046	-		Psest_3216	0.76	+0.9
3,387,046	-		Psest_3216	0.76	+1.1
3,387,046	-		Psest_3216	0.76	+1.6
3,387,178	+		Psest_3216	0.82	+1.6
3,387,178	+		Psest_3216	0.82	+1.8
3,387,178	+		Psest_3216	0.82	+1.0
3,387,178	+		Psest_3216	0.82	+1.4
3,387,179	-		Psest_3216	0.82	+1.1
3,387,179	-		Psest_3216	0.82	+1.5
3,387,179	-		Psest_3216	0.82	+1.1
3,387,179	-		Psest_3216	0.82	+0.8
3,387,179	-		Psest_3216	0.82	+0.8
3,387,304	+		Psest_3216	0.88	+1.3
3,387,304	+		Psest_3216	0.88	+0.3
3,387,304	+		Psest_3216	0.88	+1.4
3,387,305	-		Psest_3216	0.88	+1.3
3,387,305	-		Psest_3216	0.88	+1.8
3,387,305	-		Psest_3216	0.88	+0.9
3,387,305	-		Psest_3216	0.88	+1.3
3,387,523	+				+1.0
3,387,523	+				+0.7
3,387,523	+				+1.6
3,387,544	+				+1.7
3,387,544	+				+0.1
3,387,545	-				+1.4
3,387,561	-				+1.4
3,387,804	+				+1.1
3,387,805	-				+0.2
3,387,879	+				+1.2
3,387,879	+				+1.0
3,387,880	-				+0.6
3,388,037	+				+1.4
3,388,037	+				+0.9
3,388,037	+				+1.4
3,388,037	+				+0.8
3,388,038	-				+1.5
3,388,038	-				-1.8
3,388,038	-				+0.9
3,388,038	-				+0.2
3,388,427	+		Psest_3217	0.20	+0.8
3,388,427	+		Psest_3217	0.20	-0.3
3,388,427	+		Psest_3217	0.20	+2.0
3,388,427	+		Psest_3217	0.20	+1.1
3,388,465	+		Psest_3217	0.21	+1.2
3,388,556	+		Psest_3217	0.23	+0.5