Experiment: Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3191 and Psest_3192 overlap by 8 nucleotides Psest_3192 and Psest_3193 are separated by 195 nucleotides
Psest_3191: Psest_3191 - 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases, at 3,362,987 to 3,363,970
_3191
Psest_3192: Psest_3192 - diguanylate cyclase (GGDEF) domain, at 3,363,963 to 3,365,093
_3192
Psest_3193: Psest_3193 - hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region/hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region, at 3,365,289 to 3,366,812
_3193
Position (kb)
3363
3364
3365
3366 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 3363.380 kb on + strand, within Psest_3191 at 3363.414 kb on + strand, within Psest_3191 at 3363.414 kb on + strand, within Psest_3191 at 3363.414 kb on + strand, within Psest_3191 at 3363.977 kb on + strand at 3364.438 kb on + strand, within Psest_3192 at 3364.439 kb on - strand, within Psest_3192 at 3364.439 kb on - strand, within Psest_3192 at 3364.654 kb on + strand, within Psest_3192 at 3364.654 kb on + strand, within Psest_3192 at 3364.654 kb on + strand, within Psest_3192 at 3364.654 kb on + strand, within Psest_3192 at 3364.655 kb on - strand, within Psest_3192 at 3364.655 kb on - strand, within Psest_3192 at 3364.655 kb on - strand, within Psest_3192 at 3364.655 kb on - strand, within Psest_3192 at 3364.657 kb on + strand, within Psest_3192 at 3364.657 kb on + strand, within Psest_3192 at 3364.759 kb on + strand, within Psest_3192 at 3364.760 kb on - strand, within Psest_3192 at 3364.760 kb on - strand, within Psest_3192 at 3364.807 kb on + strand, within Psest_3192 at 3364.807 kb on + strand, within Psest_3192 at 3364.807 kb on + strand, within Psest_3192 at 3364.808 kb on - strand, within Psest_3192 at 3364.808 kb on - strand, within Psest_3192 at 3364.808 kb on - strand, within Psest_3192 at 3364.808 kb on - strand, within Psest_3192 at 3364.808 kb on - strand, within Psest_3192 at 3364.963 kb on + strand, within Psest_3192 at 3364.963 kb on + strand, within Psest_3192 at 3365.011 kb on + strand at 3365.011 kb on + strand at 3365.012 kb on - strand at 3365.012 kb on - strand at 3365.046 kb on + strand at 3365.046 kb on + strand at 3365.047 kb on - strand at 3365.047 kb on - strand at 3365.094 kb on - strand at 3365.152 kb on + strand at 3365.152 kb on + strand at 3365.209 kb on + strand at 3365.209 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Dimethyl Sulfoxide 5 vol% remove 3,363,380 + Psest_3191 0.40 -0.8 3,363,414 + Psest_3191 0.43 +1.0 3,363,414 + Psest_3191 0.43 +0.4 3,363,414 + Psest_3191 0.43 +0.2 3,363,977 + -0.3 3,364,438 + Psest_3192 0.42 +1.8 3,364,439 - Psest_3192 0.42 -0.3 3,364,439 - Psest_3192 0.42 +0.9 3,364,654 + Psest_3192 0.61 +2.4 3,364,654 + Psest_3192 0.61 -0.1 3,364,654 + Psest_3192 0.61 +1.5 3,364,654 + Psest_3192 0.61 -0.3 3,364,655 - Psest_3192 0.61 +0.5 3,364,655 - Psest_3192 0.61 +0.1 3,364,655 - Psest_3192 0.61 +0.3 3,364,655 - Psest_3192 0.61 +1.1 3,364,657 + Psest_3192 0.61 +0.7 3,364,657 + Psest_3192 0.61 +0.0 3,364,759 + Psest_3192 0.70 +0.2 3,364,760 - Psest_3192 0.70 +1.1 3,364,760 - Psest_3192 0.70 +0.6 3,364,807 + Psest_3192 0.75 -0.0 3,364,807 + Psest_3192 0.75 +3.0 3,364,807 + Psest_3192 0.75 -0.6 3,364,808 - Psest_3192 0.75 +1.3 3,364,808 - Psest_3192 0.75 +0.4 3,364,808 - Psest_3192 0.75 +0.5 3,364,808 - Psest_3192 0.75 -0.6 3,364,808 - Psest_3192 0.75 +2.1 3,364,963 + Psest_3192 0.88 +1.5 3,364,963 + Psest_3192 0.88 +2.3 3,365,011 + +1.2 3,365,011 + +2.8 3,365,012 - -0.2 3,365,012 - +0.8 3,365,046 + +1.2 3,365,046 + +0.1 3,365,047 - +0.0 3,365,047 - +0.2 3,365,094 - -2.2 3,365,152 + -0.7 3,365,152 + +0.5 3,365,209 + -1.2 3,365,209 + -0.0
Or see this region's nucleotide sequence