Experiment: Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2738 and Psest_2739 are separated by 381 nucleotides Psest_2739 and Psest_2740 are separated by 117 nucleotides Psest_2740 and Psest_2741 are separated by 120 nucleotides
Psest_2738: Psest_2738 - hypothetical protein, at 2,928,508 to 2,929,200
_2738
Psest_2739: Psest_2739 - Transcriptional regulator, at 2,929,582 to 2,930,483
_2739
Psest_2740: Psest_2740 - Acyl carrier protein phosphodiesterase, at 2,930,601 to 2,931,323
_2740
Psest_2741: Psest_2741 - catalase/peroxidase HPI, at 2,931,444 to 2,933,675
_2741
Position (kb)
2929
2930
2931 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 2928.727 kb on + strand, within Psest_2738 at 2928.727 kb on + strand, within Psest_2738 at 2928.728 kb on - strand, within Psest_2738 at 2928.728 kb on - strand, within Psest_2738 at 2928.728 kb on - strand, within Psest_2738 at 2928.728 kb on - strand, within Psest_2738 at 2928.728 kb on - strand, within Psest_2738 at 2928.728 kb on - strand, within Psest_2738 at 2928.728 kb on - strand, within Psest_2738 at 2928.728 kb on - strand, within Psest_2738 at 2928.770 kb on - strand, within Psest_2738 at 2928.792 kb on + strand, within Psest_2738 at 2928.792 kb on + strand, within Psest_2738 at 2928.793 kb on - strand, within Psest_2738 at 2928.795 kb on + strand, within Psest_2738 at 2928.811 kb on + strand, within Psest_2738 at 2928.835 kb on - strand, within Psest_2738 at 2928.880 kb on + strand, within Psest_2738 at 2929.065 kb on - strand, within Psest_2738 at 2929.105 kb on + strand, within Psest_2738 at 2929.105 kb on + strand, within Psest_2738 at 2929.122 kb on + strand, within Psest_2738 at 2929.123 kb on - strand, within Psest_2738 at 2929.175 kb on + strand at 2929.175 kb on + strand at 2929.195 kb on - strand at 2929.199 kb on - strand at 2929.523 kb on - strand at 2929.523 kb on - strand at 2929.523 kb on - strand at 2929.675 kb on + strand, within Psest_2739 at 2929.675 kb on + strand, within Psest_2739 at 2929.675 kb on + strand, within Psest_2739 at 2929.675 kb on + strand, within Psest_2739 at 2929.675 kb on + strand, within Psest_2739 at 2929.675 kb on + strand, within Psest_2739 at 2929.675 kb on + strand, within Psest_2739 at 2929.675 kb on + strand, within Psest_2739 at 2929.675 kb on + strand, within Psest_2739 at 2929.675 kb on + strand, within Psest_2739 at 2929.675 kb on + strand, within Psest_2739 at 2929.676 kb on - strand, within Psest_2739 at 2929.676 kb on - strand, within Psest_2739 at 2929.676 kb on - strand, within Psest_2739 at 2929.676 kb on - strand, within Psest_2739 at 2929.676 kb on - strand, within Psest_2739 at 2929.676 kb on - strand, within Psest_2739 at 2929.676 kb on - strand, within Psest_2739 at 2929.676 kb on - strand, within Psest_2739 at 2929.676 kb on - strand, within Psest_2739 at 2929.676 kb on - strand, within Psest_2739 at 2929.676 kb on - strand, within Psest_2739 at 2929.676 kb on - strand, within Psest_2739 at 2929.676 kb on - strand, within Psest_2739 at 2930.180 kb on + strand, within Psest_2739 at 2930.180 kb on + strand, within Psest_2739 at 2930.181 kb on - strand, within Psest_2739 at 2930.181 kb on - strand, within Psest_2739 at 2930.181 kb on - strand, within Psest_2739 at 2930.186 kb on + strand, within Psest_2739 at 2930.504 kb on + strand at 2930.504 kb on + strand at 2930.504 kb on + strand at 2930.505 kb on - strand at 2930.534 kb on + strand at 2930.548 kb on - strand at 2930.749 kb on + strand, within Psest_2740 at 2930.887 kb on + strand, within Psest_2740 at 2930.887 kb on + strand, within Psest_2740 at 2930.887 kb on + strand, within Psest_2740 at 2930.887 kb on + strand, within Psest_2740 at 2930.887 kb on + strand, within Psest_2740 at 2930.887 kb on + strand, within Psest_2740 at 2930.887 kb on + strand, within Psest_2740 at 2930.888 kb on - strand, within Psest_2740 at 2930.888 kb on - strand, within Psest_2740 at 2930.888 kb on - strand, within Psest_2740 at 2930.888 kb on - strand, within Psest_2740 at 2930.888 kb on - strand, within Psest_2740 at 2930.910 kb on + strand, within Psest_2740 at 2931.009 kb on + strand, within Psest_2740 at 2931.010 kb on - strand, within Psest_2740 at 2931.049 kb on + strand, within Psest_2740 at 2931.049 kb on + strand, within Psest_2740 at 2931.049 kb on + strand, within Psest_2740 at 2931.050 kb on - strand, within Psest_2740 at 2931.050 kb on - strand, within Psest_2740 at 2931.203 kb on - strand, within Psest_2740 at 2931.203 kb on - strand, within Psest_2740 at 2931.238 kb on + strand, within Psest_2740 at 2931.238 kb on + strand, within Psest_2740 at 2931.239 kb on - strand, within Psest_2740 at 2931.239 kb on - strand, within Psest_2740 at 2931.340 kb on + strand at 2931.350 kb on - strand at 2931.350 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Dimethyl Sulfoxide 5 vol% remove 2,928,727 + Psest_2738 0.32 -1.0 2,928,727 + Psest_2738 0.32 -0.6 2,928,728 - Psest_2738 0.32 -0.5 2,928,728 - Psest_2738 0.32 -0.3 2,928,728 - Psest_2738 0.32 +2.6 2,928,728 - Psest_2738 0.32 -1.9 2,928,728 - Psest_2738 0.32 -1.9 2,928,728 - Psest_2738 0.32 +0.1 2,928,728 - Psest_2738 0.32 +0.1 2,928,728 - Psest_2738 0.32 +0.5 2,928,770 - Psest_2738 0.38 -1.1 2,928,792 + Psest_2738 0.41 -0.0 2,928,792 + Psest_2738 0.41 +1.1 2,928,793 - Psest_2738 0.41 -0.2 2,928,795 + Psest_2738 0.41 -2.3 2,928,811 + Psest_2738 0.44 -1.0 2,928,835 - Psest_2738 0.47 -0.9 2,928,880 + Psest_2738 0.54 +0.3 2,929,065 - Psest_2738 0.80 +0.0 2,929,105 + Psest_2738 0.86 +0.7 2,929,105 + Psest_2738 0.86 +0.6 2,929,122 + Psest_2738 0.89 +0.0 2,929,123 - Psest_2738 0.89 +0.7 2,929,175 + -0.6 2,929,175 + +0.6 2,929,195 - -0.9 2,929,199 - +1.7 2,929,523 - +0.6 2,929,523 - -0.7 2,929,523 - -0.7 2,929,675 + Psest_2739 0.10 -1.5 2,929,675 + Psest_2739 0.10 +1.4 2,929,675 + Psest_2739 0.10 -0.0 2,929,675 + Psest_2739 0.10 -0.0 2,929,675 + Psest_2739 0.10 +2.5 2,929,675 + Psest_2739 0.10 +0.0 2,929,675 + Psest_2739 0.10 -0.6 2,929,675 + Psest_2739 0.10 +0.8 2,929,675 + Psest_2739 0.10 +0.6 2,929,675 + Psest_2739 0.10 +2.0 2,929,675 + Psest_2739 0.10 -2.0 2,929,676 - Psest_2739 0.10 +1.4 2,929,676 - Psest_2739 0.10 +0.6 2,929,676 - Psest_2739 0.10 +1.4 2,929,676 - Psest_2739 0.10 +0.4 2,929,676 - Psest_2739 0.10 +0.6 2,929,676 - Psest_2739 0.10 -0.8 2,929,676 - Psest_2739 0.10 +1.6 2,929,676 - Psest_2739 0.10 -0.1 2,929,676 - Psest_2739 0.10 -0.1 2,929,676 - Psest_2739 0.10 +1.1 2,929,676 - Psest_2739 0.10 +1.1 2,929,676 - Psest_2739 0.10 +1.7 2,929,676 - Psest_2739 0.10 -1.2 2,930,180 + Psest_2739 0.66 -1.2 2,930,180 + Psest_2739 0.66 +0.3 2,930,181 - Psest_2739 0.66 +0.6 2,930,181 - Psest_2739 0.66 +1.3 2,930,181 - Psest_2739 0.66 -0.2 2,930,186 + Psest_2739 0.67 +1.2 2,930,504 + -0.8 2,930,504 + -0.2 2,930,504 + +1.5 2,930,505 - -0.5 2,930,534 + -0.3 2,930,548 - -0.9 2,930,749 + Psest_2740 0.20 -0.4 2,930,887 + Psest_2740 0.40 +1.0 2,930,887 + Psest_2740 0.40 +1.9 2,930,887 + Psest_2740 0.40 -2.6 2,930,887 + Psest_2740 0.40 -1.2 2,930,887 + Psest_2740 0.40 -1.1 2,930,887 + Psest_2740 0.40 +0.9 2,930,887 + Psest_2740 0.40 -1.3 2,930,888 - Psest_2740 0.40 +1.1 2,930,888 - Psest_2740 0.40 +0.9 2,930,888 - Psest_2740 0.40 +1.0 2,930,888 - Psest_2740 0.40 +1.6 2,930,888 - Psest_2740 0.40 +3.8 2,930,910 + Psest_2740 0.43 -0.8 2,931,009 + Psest_2740 0.56 +0.2 2,931,010 - Psest_2740 0.57 -1.9 2,931,049 + Psest_2740 0.62 -0.4 2,931,049 + Psest_2740 0.62 +1.7 2,931,049 + Psest_2740 0.62 -0.1 2,931,050 - Psest_2740 0.62 +0.2 2,931,050 - Psest_2740 0.62 +0.3 2,931,203 - Psest_2740 0.83 +0.3 2,931,203 - Psest_2740 0.83 +0.8 2,931,238 + Psest_2740 0.88 +0.3 2,931,238 + Psest_2740 0.88 +0.8 2,931,239 - Psest_2740 0.88 +0.8 2,931,239 - Psest_2740 0.88 -1.6 2,931,340 + -0.2 2,931,350 - +0.5 2,931,350 - -0.5
Or see this region's nucleotide sequence