Experiment: Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2147 and Psest_2148 are separated by 106 nucleotides Psest_2148 and Psest_2149 are separated by 53 nucleotides
Psest_2147: Psest_2147 - NADPH:quinone reductase and related Zn-dependent oxidoreductases, at 2,292,985 to 2,294,001
_2147
Psest_2148: Psest_2148 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 2,294,108 to 2,294,965
_2148
Psest_2149: Psest_2149 - Ku protein, prokaryotic, at 2,295,019 to 2,295,900
_2149
Position (kb)
2294
2295 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2293.282 kb on + strand, within Psest_2147 at 2293.385 kb on - strand, within Psest_2147 at 2293.866 kb on + strand, within Psest_2147 at 2293.952 kb on - strand at 2293.952 kb on - strand at 2294.019 kb on - strand at 2294.091 kb on + strand at 2294.091 kb on + strand at 2294.092 kb on - strand at 2294.130 kb on + strand at 2294.204 kb on + strand, within Psest_2148 at 2294.205 kb on - strand, within Psest_2148 at 2294.205 kb on - strand, within Psest_2148 at 2294.205 kb on - strand, within Psest_2148 at 2294.321 kb on + strand, within Psest_2148 at 2294.372 kb on + strand, within Psest_2148 at 2294.373 kb on - strand, within Psest_2148 at 2294.596 kb on - strand, within Psest_2148 at 2294.882 kb on + strand at 2294.883 kb on - strand at 2294.883 kb on - strand at 2294.883 kb on - strand at 2294.883 kb on - strand at 2294.883 kb on - strand at 2294.883 kb on - strand at 2294.883 kb on - strand at 2294.889 kb on - strand at 2294.889 kb on - strand at 2294.912 kb on + strand at 2294.913 kb on - strand at 2294.913 kb on - strand at 2294.913 kb on - strand at 2295.062 kb on + strand at 2295.217 kb on + strand, within Psest_2149 at 2295.232 kb on + strand, within Psest_2149 at 2295.232 kb on + strand, within Psest_2149 at 2295.232 kb on + strand, within Psest_2149 at 2295.233 kb on - strand, within Psest_2149 at 2295.233 kb on - strand, within Psest_2149 at 2295.233 kb on - strand, within Psest_2149 at 2295.233 kb on - strand, within Psest_2149 at 2295.233 kb on - strand, within Psest_2149 at 2295.233 kb on - strand, within Psest_2149 at 2295.233 kb on - strand, within Psest_2149 at 2295.334 kb on + strand, within Psest_2149 at 2295.334 kb on + strand, within Psest_2149 at 2295.334 kb on + strand, within Psest_2149 at 2295.335 kb on - strand, within Psest_2149 at 2295.335 kb on - strand, within Psest_2149 at 2295.335 kb on - strand, within Psest_2149 at 2295.335 kb on - strand, within Psest_2149 at 2295.349 kb on + strand, within Psest_2149 at 2295.349 kb on + strand, within Psest_2149 at 2295.350 kb on - strand, within Psest_2149 at 2295.350 kb on - strand, within Psest_2149 at 2295.350 kb on - strand, within Psest_2149 at 2295.350 kb on - strand, within Psest_2149 at 2295.352 kb on + strand, within Psest_2149 at 2295.353 kb on - strand, within Psest_2149 at 2295.385 kb on + strand, within Psest_2149 at 2295.446 kb on + strand, within Psest_2149 at 2295.447 kb on - strand, within Psest_2149 at 2295.447 kb on - strand, within Psest_2149 at 2295.450 kb on + strand, within Psest_2149 at 2295.450 kb on + strand, within Psest_2149 at 2295.450 kb on + strand, within Psest_2149 at 2295.450 kb on + strand, within Psest_2149 at 2295.451 kb on - strand, within Psest_2149 at 2295.451 kb on - strand, within Psest_2149 at 2295.451 kb on - strand, within Psest_2149 at 2295.541 kb on + strand, within Psest_2149 at 2295.649 kb on + strand, within Psest_2149 at 2295.649 kb on + strand, within Psest_2149 at 2295.649 kb on + strand, within Psest_2149 at 2295.649 kb on + strand, within Psest_2149 at 2295.650 kb on - strand, within Psest_2149
Per-strain Table
Position Strand Gene LocusTag Fraction Dimethyl Sulfoxide 5 vol% remove 2,293,282 + Psest_2147 0.29 -0.9 2,293,385 - Psest_2147 0.39 +0.6 2,293,866 + Psest_2147 0.87 +0.4 2,293,952 - -0.7 2,293,952 - +1.1 2,294,019 - -0.0 2,294,091 + +0.9 2,294,091 + -1.3 2,294,092 - -0.9 2,294,130 + -0.4 2,294,204 + Psest_2148 0.11 +1.2 2,294,205 - Psest_2148 0.11 +0.3 2,294,205 - Psest_2148 0.11 -1.5 2,294,205 - Psest_2148 0.11 +0.7 2,294,321 + Psest_2148 0.25 -0.0 2,294,372 + Psest_2148 0.31 +1.2 2,294,373 - Psest_2148 0.31 -1.3 2,294,596 - Psest_2148 0.57 +2.3 2,294,882 + -0.3 2,294,883 - -1.5 2,294,883 - -1.2 2,294,883 - -0.5 2,294,883 - -0.2 2,294,883 - -0.2 2,294,883 - -0.4 2,294,883 - +0.7 2,294,889 - +0.9 2,294,889 - -1.5 2,294,912 + -0.2 2,294,913 - +0.5 2,294,913 - +1.5 2,294,913 - -0.2 2,295,062 + -0.4 2,295,217 + Psest_2149 0.22 +0.2 2,295,232 + Psest_2149 0.24 +0.7 2,295,232 + Psest_2149 0.24 +1.1 2,295,232 + Psest_2149 0.24 -0.5 2,295,233 - Psest_2149 0.24 +0.5 2,295,233 - Psest_2149 0.24 -1.0 2,295,233 - Psest_2149 0.24 +0.6 2,295,233 - Psest_2149 0.24 +0.8 2,295,233 - Psest_2149 0.24 +0.4 2,295,233 - Psest_2149 0.24 -0.1 2,295,233 - Psest_2149 0.24 +2.4 2,295,334 + Psest_2149 0.36 +0.5 2,295,334 + Psest_2149 0.36 -1.5 2,295,334 + Psest_2149 0.36 +0.1 2,295,335 - Psest_2149 0.36 -0.9 2,295,335 - Psest_2149 0.36 +0.4 2,295,335 - Psest_2149 0.36 +0.7 2,295,335 - Psest_2149 0.36 -1.2 2,295,349 + Psest_2149 0.37 -0.6 2,295,349 + Psest_2149 0.37 -0.9 2,295,350 - Psest_2149 0.38 +0.6 2,295,350 - Psest_2149 0.38 +0.5 2,295,350 - Psest_2149 0.38 -0.3 2,295,350 - Psest_2149 0.38 -0.1 2,295,352 + Psest_2149 0.38 -0.3 2,295,353 - Psest_2149 0.38 +1.5 2,295,385 + Psest_2149 0.41 +0.3 2,295,446 + Psest_2149 0.48 -0.7 2,295,447 - Psest_2149 0.49 -0.4 2,295,447 - Psest_2149 0.49 +0.7 2,295,450 + Psest_2149 0.49 +0.4 2,295,450 + Psest_2149 0.49 -2.4 2,295,450 + Psest_2149 0.49 -1.1 2,295,450 + Psest_2149 0.49 -0.5 2,295,451 - Psest_2149 0.49 +0.3 2,295,451 - Psest_2149 0.49 +1.1 2,295,451 - Psest_2149 0.49 -1.5 2,295,541 + Psest_2149 0.59 -0.2 2,295,649 + Psest_2149 0.71 +0.8 2,295,649 + Psest_2149 0.71 +1.1 2,295,649 + Psest_2149 0.71 -0.3 2,295,649 + Psest_2149 0.71 +0.9 2,295,650 - Psest_2149 0.72 -1.0
Or see this region's nucleotide sequence