Experiment: Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1660 and Psest_1661 are separated by 1 nucleotides Psest_1661 and Psest_1662 overlap by 4 nucleotides Psest_1662 and Psest_1663 are separated by 146 nucleotides
Psest_1660: Psest_1660 - NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit, at 1,769,506 to 1,770,729
_1660
Psest_1661: Psest_1661 - Membrane-associated lipoprotein involved in thiamine biosynthesis, at 1,770,731 to 1,771,783
_1661
Psest_1662: Psest_1662 - Uncharacterized protein conserved in bacteria, at 1,771,780 to 1,772,007
_1662
Psest_1663: Psest_1663 - Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes, at 1,772,154 to 1,773,548
_1663
Position (kb)
1770
1771
1772 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1770.064 kb on + strand, within Psest_1660 at 1770.100 kb on + strand, within Psest_1660 at 1770.244 kb on + strand, within Psest_1660 at 1770.457 kb on + strand, within Psest_1660 at 1770.469 kb on + strand, within Psest_1660 at 1770.469 kb on + strand, within Psest_1660 at 1770.589 kb on + strand, within Psest_1660 at 1770.628 kb on + strand at 1770.628 kb on + strand at 1770.628 kb on + strand at 1770.770 kb on + strand at 1770.770 kb on + strand at 1770.872 kb on + strand, within Psest_1661 at 1770.872 kb on + strand, within Psest_1661 at 1770.872 kb on + strand, within Psest_1661 at 1770.884 kb on + strand, within Psest_1661 at 1770.884 kb on + strand, within Psest_1661 at 1770.884 kb on + strand, within Psest_1661 at 1770.884 kb on + strand, within Psest_1661 at 1770.884 kb on + strand, within Psest_1661 at 1770.884 kb on + strand, within Psest_1661 at 1770.884 kb on + strand, within Psest_1661 at 1771.647 kb on + strand, within Psest_1661 at 1772.127 kb on + strand at 1772.151 kb on + strand at 1772.151 kb on + strand at 1772.151 kb on + strand at 1772.151 kb on + strand at 1772.151 kb on + strand at 1772.152 kb on - strand at 1772.164 kb on - strand at 1772.164 kb on - strand at 1772.637 kb on - strand, within Psest_1663 at 1772.641 kb on - strand, within Psest_1663
Per-strain Table
Position Strand Gene LocusTag Fraction Dimethyl Sulfoxide 5 vol% remove 1,770,064 + Psest_1660 0.46 +0.6 1,770,100 + Psest_1660 0.49 +0.4 1,770,244 + Psest_1660 0.60 -1.4 1,770,457 + Psest_1660 0.78 -0.9 1,770,469 + Psest_1660 0.79 +0.3 1,770,469 + Psest_1660 0.79 +0.9 1,770,589 + Psest_1660 0.88 +2.1 1,770,628 + +2.1 1,770,628 + +1.5 1,770,628 + +0.4 1,770,770 + +1.2 1,770,770 + +1.3 1,770,872 + Psest_1661 0.13 -0.4 1,770,872 + Psest_1661 0.13 +1.1 1,770,872 + Psest_1661 0.13 +1.1 1,770,884 + Psest_1661 0.15 +1.6 1,770,884 + Psest_1661 0.15 +2.5 1,770,884 + Psest_1661 0.15 +2.1 1,770,884 + Psest_1661 0.15 +1.1 1,770,884 + Psest_1661 0.15 +3.7 1,770,884 + Psest_1661 0.15 -0.4 1,770,884 + Psest_1661 0.15 +2.1 1,771,647 + Psest_1661 0.87 +0.1 1,772,127 + -0.2 1,772,151 + -1.0 1,772,151 + -0.9 1,772,151 + +0.6 1,772,151 + -1.2 1,772,151 + -0.4 1,772,152 - -0.6 1,772,164 - -0.5 1,772,164 - +1.1 1,772,637 - Psest_1663 0.35 +1.9 1,772,641 - Psest_1663 0.35 +2.4
Or see this region's nucleotide sequence