Experiment: Dimethyl Sulfoxide 5 vol%
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1074 and Psest_1075 are separated by 409 nucleotides Psest_1075 and Psest_1076 are separated by 77 nucleotides Psest_1076 and Psest_1077 are separated by 257 nucleotides Psest_1077 and Psest_1078 are separated by 4 nucleotides
Psest_1074: Psest_1074 - TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component, at 1,162,493 to 1,163,578
_1074
Psest_1075: Psest_1075 - Predicted transcriptional regulators, at 1,163,988 to 1,164,386
_1075
Psest_1076: Psest_1076 - acetyl-CoA acetyltransferases, at 1,164,464 to 1,165,645
_1076
Psest_1077: Psest_1077 - acetyl-CoA:acetoacetate CoA transferase, B subunit (EC 2.8.3.8) (from data) , at 1,165,903 to 1,166,532
_1077
Psest_1078: Psest_1078 - acetyl-CoA:acetoacetate CoA transferase, A subunit (EC 2.8.3.8) (from data) , at 1,166,537 to 1,167,232
_1078
Position (kb)
1164
1165
1166 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1163.969 kb on + strand at 1163.970 kb on - strand at 1164.262 kb on + strand, within Psest_1075 at 1164.262 kb on + strand, within Psest_1075 at 1164.262 kb on + strand, within Psest_1075 at 1164.262 kb on + strand, within Psest_1075 at 1164.263 kb on - strand, within Psest_1075 at 1164.263 kb on - strand, within Psest_1075 at 1164.263 kb on - strand, within Psest_1075 at 1164.263 kb on - strand, within Psest_1075 at 1164.263 kb on - strand, within Psest_1075 at 1164.263 kb on - strand, within Psest_1075 at 1164.263 kb on - strand, within Psest_1075 at 1164.313 kb on + strand, within Psest_1075 at 1164.314 kb on - strand, within Psest_1075 at 1164.365 kb on + strand at 1164.365 kb on + strand at 1164.365 kb on + strand at 1164.365 kb on + strand at 1164.366 kb on - strand at 1164.366 kb on - strand at 1164.370 kb on + strand at 1164.370 kb on + strand at 1164.370 kb on + strand at 1164.370 kb on + strand at 1164.370 kb on + strand at 1164.370 kb on + strand at 1164.370 kb on + strand at 1164.370 kb on + strand at 1164.370 kb on + strand at 1164.370 kb on + strand at 1164.370 kb on + strand at 1164.370 kb on + strand at 1164.370 kb on + strand at 1164.371 kb on - strand at 1164.488 kb on + strand at 1165.143 kb on + strand, within Psest_1076 at 1165.143 kb on + strand, within Psest_1076 at 1165.144 kb on - strand, within Psest_1076 at 1165.182 kb on + strand, within Psest_1076 at 1165.278 kb on + strand, within Psest_1076 at 1165.278 kb on + strand, within Psest_1076 at 1165.279 kb on - strand, within Psest_1076 at 1165.279 kb on - strand, within Psest_1076 at 1165.279 kb on - strand, within Psest_1076 at 1165.279 kb on - strand, within Psest_1076 at 1165.279 kb on - strand, within Psest_1076 at 1165.279 kb on - strand, within Psest_1076 at 1165.625 kb on + strand at 1165.786 kb on + strand at 1165.786 kb on + strand at 1165.787 kb on - strand at 1165.788 kb on + strand at 1166.429 kb on + strand, within Psest_1077 at 1166.429 kb on + strand, within Psest_1077 at 1166.429 kb on + strand, within Psest_1077 at 1166.429 kb on + strand, within Psest_1077 at 1166.429 kb on + strand, within Psest_1077 at 1166.429 kb on + strand, within Psest_1077 at 1166.429 kb on + strand, within Psest_1077 at 1166.429 kb on + strand, within Psest_1077 at 1166.429 kb on + strand, within Psest_1077 at 1166.429 kb on + strand, within Psest_1077 at 1166.429 kb on + strand, within Psest_1077 at 1166.429 kb on + strand, within Psest_1077 at 1166.429 kb on + strand, within Psest_1077 at 1166.430 kb on - strand, within Psest_1077 at 1166.430 kb on - strand, within Psest_1077 at 1166.430 kb on - strand, within Psest_1077 at 1166.430 kb on - strand, within Psest_1077 at 1166.430 kb on - strand, within Psest_1077 at 1166.430 kb on - strand, within Psest_1077 at 1166.430 kb on - strand, within Psest_1077 at 1166.471 kb on + strand at 1166.471 kb on + strand at 1166.471 kb on + strand at 1166.472 kb on - strand at 1166.472 kb on - strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.604 kb on + strand at 1166.605 kb on - strand at 1166.605 kb on - strand at 1166.605 kb on - strand at 1166.605 kb on - strand at 1166.605 kb on - strand at 1166.605 kb on - strand at 1166.605 kb on - strand at 1166.605 kb on - strand at 1166.605 kb on - strand at 1166.605 kb on - strand at 1166.605 kb on - strand at 1166.605 kb on - strand at 1166.605 kb on - strand at 1166.605 kb on - strand at 1166.605 kb on - strand at 1166.605 kb on - strand at 1166.605 kb on - strand at 1166.605 kb on - strand at 1166.605 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Dimethyl Sulfoxide 5 vol% remove 1,163,969 + +1.8 1,163,970 - +0.1 1,164,262 + Psest_1075 0.69 +1.7 1,164,262 + Psest_1075 0.69 +0.3 1,164,262 + Psest_1075 0.69 +0.1 1,164,262 + Psest_1075 0.69 +1.0 1,164,263 - Psest_1075 0.69 +0.8 1,164,263 - Psest_1075 0.69 -0.8 1,164,263 - Psest_1075 0.69 -0.2 1,164,263 - Psest_1075 0.69 +0.3 1,164,263 - Psest_1075 0.69 +2.0 1,164,263 - Psest_1075 0.69 +0.4 1,164,263 - Psest_1075 0.69 +0.5 1,164,313 + Psest_1075 0.81 +1.1 1,164,314 - Psest_1075 0.82 -0.8 1,164,365 + +2.7 1,164,365 + -0.9 1,164,365 + -0.2 1,164,365 + -1.2 1,164,366 - +0.3 1,164,366 - -0.8 1,164,370 + +1.3 1,164,370 + +1.0 1,164,370 + +0.1 1,164,370 + +0.3 1,164,370 + +0.4 1,164,370 + -0.1 1,164,370 + -2.2 1,164,370 + +0.3 1,164,370 + -0.8 1,164,370 + +1.0 1,164,370 + +0.0 1,164,370 + +0.4 1,164,370 + +0.5 1,164,371 - -0.5 1,164,488 + -0.3 1,165,143 + Psest_1076 0.57 +0.1 1,165,143 + Psest_1076 0.57 -0.8 1,165,144 - Psest_1076 0.58 -1.6 1,165,182 + Psest_1076 0.61 -0.6 1,165,278 + Psest_1076 0.69 +0.7 1,165,278 + Psest_1076 0.69 -0.8 1,165,279 - Psest_1076 0.69 -0.5 1,165,279 - Psest_1076 0.69 -0.4 1,165,279 - Psest_1076 0.69 -0.2 1,165,279 - Psest_1076 0.69 +0.8 1,165,279 - Psest_1076 0.69 -1.7 1,165,279 - Psest_1076 0.69 -1.9 1,165,625 + +0.9 1,165,786 + +2.3 1,165,786 + -1.5 1,165,787 - +0.4 1,165,788 + -0.3 1,166,429 + Psest_1077 0.83 +0.4 1,166,429 + Psest_1077 0.83 -0.8 1,166,429 + Psest_1077 0.83 -1.1 1,166,429 + Psest_1077 0.83 +1.2 1,166,429 + Psest_1077 0.83 +0.3 1,166,429 + Psest_1077 0.83 -0.7 1,166,429 + Psest_1077 0.83 +0.7 1,166,429 + Psest_1077 0.83 -1.3 1,166,429 + Psest_1077 0.83 +1.3 1,166,429 + Psest_1077 0.83 -0.4 1,166,429 + Psest_1077 0.83 +0.9 1,166,429 + Psest_1077 0.83 +0.4 1,166,429 + Psest_1077 0.83 -0.6 1,166,430 - Psest_1077 0.84 -0.4 1,166,430 - Psest_1077 0.84 +1.1 1,166,430 - Psest_1077 0.84 +1.2 1,166,430 - Psest_1077 0.84 +0.3 1,166,430 - Psest_1077 0.84 -0.3 1,166,430 - Psest_1077 0.84 +0.8 1,166,430 - Psest_1077 0.84 +1.4 1,166,471 + -0.2 1,166,471 + +0.6 1,166,471 + -1.7 1,166,472 - -0.2 1,166,472 - -0.9 1,166,604 + +0.8 1,166,604 + +2.1 1,166,604 + +0.3 1,166,604 + -0.1 1,166,604 + +1.0 1,166,604 + +0.4 1,166,604 + -0.5 1,166,604 + +1.8 1,166,604 + -0.5 1,166,604 + +1.9 1,166,604 + +0.8 1,166,604 + -0.9 1,166,604 + -1.5 1,166,604 + +0.8 1,166,604 + -1.4 1,166,604 + +0.1 1,166,604 + +0.3 1,166,604 + +0.5 1,166,604 + -1.3 1,166,604 + +0.4 1,166,604 + -0.5 1,166,604 + -0.2 1,166,604 + -0.1 1,166,604 + -0.1 1,166,604 + +1.6 1,166,604 + +0.5 1,166,605 - +0.9 1,166,605 - +0.3 1,166,605 - -2.4 1,166,605 - +0.5 1,166,605 - +1.1 1,166,605 - +0.5 1,166,605 - -1.7 1,166,605 - +0.3 1,166,605 - -1.7 1,166,605 - +1.7 1,166,605 - +0.5 1,166,605 - -1.8 1,166,605 - +2.5 1,166,605 - +0.5 1,166,605 - -0.3 1,166,605 - -1.6 1,166,605 - +0.8 1,166,605 - -0.4 1,166,605 - -0.4
Or see this region's nucleotide sequence