Experiment: Fusidic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2392 and Psest_2393 are separated by 36 nucleotides Psest_2393 and Psest_2394 are separated by 79 nucleotides
Psest_2392: Psest_2392 - PAS domain S-box/diguanylate cyclase (GGDEF) domain, at 2,543,054 to 2,545,714
_2392
Psest_2393: Psest_2393 - ferrochelatase, at 2,545,751 to 2,546,776
_2393
Psest_2394: Psest_2394 - TIGR01777 family protein, at 2,546,856 to 2,547,758
_2394
Position (kb)
2545
2546
2547 Strain fitness (log2 ratio)
-1
0
1
2 at 2544.811 kb on + strand, within Psest_2392 at 2544.811 kb on + strand, within Psest_2392 at 2544.851 kb on + strand, within Psest_2392 at 2544.852 kb on - strand, within Psest_2392 at 2544.852 kb on - strand, within Psest_2392 at 2544.852 kb on - strand, within Psest_2392 at 2544.852 kb on - strand, within Psest_2392 at 2544.852 kb on - strand, within Psest_2392 at 2545.132 kb on - strand, within Psest_2392 at 2545.132 kb on - strand, within Psest_2392 at 2545.132 kb on - strand, within Psest_2392 at 2545.243 kb on - strand, within Psest_2392 at 2545.330 kb on + strand, within Psest_2392 at 2545.330 kb on + strand, within Psest_2392 at 2545.330 kb on + strand, within Psest_2392 at 2545.331 kb on - strand, within Psest_2392 at 2545.425 kb on - strand, within Psest_2392 at 2545.629 kb on - strand at 2547.097 kb on + strand, within Psest_2394 at 2547.098 kb on - strand, within Psest_2394 at 2547.098 kb on - strand, within Psest_2394 at 2547.409 kb on + strand, within Psest_2394 at 2547.639 kb on + strand, within Psest_2394 at 2547.639 kb on + strand, within Psest_2394 at 2547.639 kb on + strand, within Psest_2394 at 2547.639 kb on + strand, within Psest_2394 at 2547.640 kb on - strand, within Psest_2394 at 2547.640 kb on - strand, within Psest_2394 at 2547.640 kb on - strand, within Psest_2394 at 2547.640 kb on - strand, within Psest_2394 at 2547.640 kb on - strand, within Psest_2394 at 2547.711 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.016 mg/ml remove 2,544,811 + Psest_2392 0.66 +0.8 2,544,811 + Psest_2392 0.66 -1.6 2,544,851 + Psest_2392 0.68 -0.7 2,544,852 - Psest_2392 0.68 +0.7 2,544,852 - Psest_2392 0.68 +0.8 2,544,852 - Psest_2392 0.68 +0.7 2,544,852 - Psest_2392 0.68 +2.0 2,544,852 - Psest_2392 0.68 +0.4 2,545,132 - Psest_2392 0.78 +0.9 2,545,132 - Psest_2392 0.78 +1.1 2,545,132 - Psest_2392 0.78 -1.5 2,545,243 - Psest_2392 0.82 +0.8 2,545,330 + Psest_2392 0.86 +2.6 2,545,330 + Psest_2392 0.86 +0.1 2,545,330 + Psest_2392 0.86 +1.4 2,545,331 - Psest_2392 0.86 +0.9 2,545,425 - Psest_2392 0.89 +0.7 2,545,629 - +0.8 2,547,097 + Psest_2394 0.27 -0.8 2,547,098 - Psest_2394 0.27 +0.5 2,547,098 - Psest_2394 0.27 -1.3 2,547,409 + Psest_2394 0.61 -0.8 2,547,639 + Psest_2394 0.87 -0.5 2,547,639 + Psest_2394 0.87 -1.0 2,547,639 + Psest_2394 0.87 -0.7 2,547,639 + Psest_2394 0.87 -0.6 2,547,640 - Psest_2394 0.87 +0.2 2,547,640 - Psest_2394 0.87 -1.5 2,547,640 - Psest_2394 0.87 +0.8 2,547,640 - Psest_2394 0.87 -0.2 2,547,640 - Psest_2394 0.87 -0.8 2,547,711 + +0.0
Or see this region's nucleotide sequence