Experiment: Paraquat dichloride 0.015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0493 and Psest_0494 are separated by 11 nucleotides Psest_0494 and Psest_0495 are separated by 47 nucleotides Psest_0495 and Psest_0496 are separated by 164 nucleotides
Psest_0493: Psest_0493 - phosphatidylserine decarboxylase precursor, at 547,623 to 548,522
_0493
Psest_0494: Psest_0494 - Rhodanese-related sulfurtransferase, at 548,534 to 549,349
_0494
Psest_0495: Psest_0495 - HDOD domain., at 549,397 to 550,911
_0495
Psest_0496: Psest_0496 - flagellar motor stator protein MotA, at 551,076 to 551,927
_0496
Position (kb) 549
550
551 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3
4
5 at 548.589 kb on + strand at 548.632 kb on - strand, within Psest_0494 at 548.632 kb on - strand, within Psest_0494 at 548.632 kb on - strand, within Psest_0494 at 548.632 kb on - strand, within Psest_0494 at 548.632 kb on - strand, within Psest_0494 at 548.736 kb on - strand, within Psest_0494 at 548.893 kb on - strand, within Psest_0494 at 548.893 kb on - strand, within Psest_0494 at 548.893 kb on - strand, within Psest_0494 at 548.893 kb on - strand, within Psest_0494 at 548.893 kb on - strand, within Psest_0494 at 548.893 kb on - strand, within Psest_0494 at 548.893 kb on - strand, within Psest_0494 at 548.893 kb on - strand, within Psest_0494 at 548.893 kb on - strand, within Psest_0494 at 548.893 kb on - strand, within Psest_0494 at 548.893 kb on - strand, within Psest_0494 at 548.893 kb on - strand, within Psest_0494 at 548.893 kb on - strand, within Psest_0494 at 548.893 kb on - strand, within Psest_0494 at 548.893 kb on - strand, within Psest_0494 at 548.893 kb on - strand, within Psest_0494 at 548.893 kb on - strand, within Psest_0494 at 549.091 kb on - strand, within Psest_0494 at 549.091 kb on - strand, within Psest_0494 at 549.091 kb on - strand, within Psest_0494 at 549.100 kb on - strand, within Psest_0494 at 549.100 kb on - strand, within Psest_0494 at 549.100 kb on - strand, within Psest_0494 at 549.370 kb on - strand at 549.370 kb on - strand at 549.370 kb on - strand at 549.370 kb on - strand at 549.668 kb on - strand, within Psest_0495 at 549.668 kb on - strand, within Psest_0495 at 549.668 kb on - strand, within Psest_0495 at 549.668 kb on - strand, within Psest_0495 at 549.668 kb on - strand, within Psest_0495 at 549.832 kb on + strand, within Psest_0495 at 549.832 kb on + strand, within Psest_0495 at 549.832 kb on + strand, within Psest_0495 at 549.832 kb on + strand, within Psest_0495 at 549.832 kb on + strand, within Psest_0495 at 550.064 kb on + strand, within Psest_0495 at 550.064 kb on + strand, within Psest_0495 at 550.064 kb on + strand, within Psest_0495 at 550.064 kb on + strand, within Psest_0495 at 550.065 kb on - strand, within Psest_0495 at 550.065 kb on - strand, within Psest_0495 at 550.065 kb on - strand, within Psest_0495 at 550.727 kb on - strand, within Psest_0495 at 550.892 kb on - strand at 551.069 kb on + strand at 551.069 kb on + strand at 551.070 kb on - strand at 551.070 kb on - strand at 551.075 kb on + strand at 551.075 kb on + strand at 551.075 kb on + strand at 551.075 kb on + strand at 551.076 kb on - strand at 551.293 kb on - strand, within Psest_0496 at 551.293 kb on - strand, within Psest_0496 at 551.293 kb on - strand, within Psest_0496 at 551.295 kb on + strand, within Psest_0496 at 551.295 kb on + strand, within Psest_0496 at 551.295 kb on + strand, within Psest_0496 at 551.320 kb on - strand, within Psest_0496 at 551.409 kb on + strand, within Psest_0496 at 551.409 kb on + strand, within Psest_0496 at 551.410 kb on - strand, within Psest_0496 at 551.410 kb on - strand, within Psest_0496 at 551.410 kb on - strand, within Psest_0496 at 551.457 kb on + strand, within Psest_0496 at 551.457 kb on + strand, within Psest_0496 at 551.458 kb on - strand, within Psest_0496 at 551.458 kb on - strand, within Psest_0496 at 551.458 kb on - strand, within Psest_0496 at 551.673 kb on + strand, within Psest_0496 at 551.725 kb on - strand, within Psest_0496 at 551.725 kb on - strand, within Psest_0496 at 551.725 kb on - strand, within Psest_0496
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.015 mg/ml remove 548,589 + +0.5 548,632 - Psest_0494 0.12 +0.1 548,632 - Psest_0494 0.12 -0.0 548,632 - Psest_0494 0.12 +1.2 548,632 - Psest_0494 0.12 -2.7 548,632 - Psest_0494 0.12 +0.4 548,736 - Psest_0494 0.25 +1.8 548,893 - Psest_0494 0.44 -0.4 548,893 - Psest_0494 0.44 -3.1 548,893 - Psest_0494 0.44 -1.1 548,893 - Psest_0494 0.44 -0.1 548,893 - Psest_0494 0.44 +2.3 548,893 - Psest_0494 0.44 -1.4 548,893 - Psest_0494 0.44 -1.9 548,893 - Psest_0494 0.44 +0.6 548,893 - Psest_0494 0.44 +0.3 548,893 - Psest_0494 0.44 -0.1 548,893 - Psest_0494 0.44 +2.7 548,893 - Psest_0494 0.44 -0.3 548,893 - Psest_0494 0.44 +1.7 548,893 - Psest_0494 0.44 +0.0 548,893 - Psest_0494 0.44 +1.4 548,893 - Psest_0494 0.44 -1.1 548,893 - Psest_0494 0.44 +1.2 549,091 - Psest_0494 0.68 -0.2 549,091 - Psest_0494 0.68 -0.7 549,091 - Psest_0494 0.68 +1.3 549,100 - Psest_0494 0.69 -0.7 549,100 - Psest_0494 0.69 +0.4 549,100 - Psest_0494 0.69 -1.1 549,370 - +1.5 549,370 - -0.2 549,370 - +2.5 549,370 - -0.4 549,668 - Psest_0495 0.18 +1.1 549,668 - Psest_0495 0.18 +0.5 549,668 - Psest_0495 0.18 +1.1 549,668 - Psest_0495 0.18 -4.0 549,668 - Psest_0495 0.18 -1.1 549,832 + Psest_0495 0.29 +4.4 549,832 + Psest_0495 0.29 -2.7 549,832 + Psest_0495 0.29 +2.5 549,832 + Psest_0495 0.29 +2.4 549,832 + Psest_0495 0.29 -0.5 550,064 + Psest_0495 0.44 +0.0 550,064 + Psest_0495 0.44 -1.7 550,064 + Psest_0495 0.44 -1.0 550,064 + Psest_0495 0.44 +1.4 550,065 - Psest_0495 0.44 +1.8 550,065 - Psest_0495 0.44 -1.2 550,065 - Psest_0495 0.44 +2.1 550,727 - Psest_0495 0.88 -3.6 550,892 - +0.2 551,069 + +1.0 551,069 + +2.1 551,070 - -2.3 551,070 - -0.0 551,075 + +1.9 551,075 + -1.4 551,075 + -1.2 551,075 + +0.3 551,076 - -0.3 551,293 - Psest_0496 0.25 -0.7 551,293 - Psest_0496 0.25 -0.7 551,293 - Psest_0496 0.25 -0.7 551,295 + Psest_0496 0.26 +0.2 551,295 + Psest_0496 0.26 +1.0 551,295 + Psest_0496 0.26 +1.2 551,320 - Psest_0496 0.29 +0.3 551,409 + Psest_0496 0.39 -0.3 551,409 + Psest_0496 0.39 +4.9 551,410 - Psest_0496 0.39 -1.1 551,410 - Psest_0496 0.39 -0.5 551,410 - Psest_0496 0.39 -0.4 551,457 + Psest_0496 0.45 -1.1 551,457 + Psest_0496 0.45 -1.0 551,458 - Psest_0496 0.45 +1.1 551,458 - Psest_0496 0.45 -0.0 551,458 - Psest_0496 0.45 +2.0 551,673 + Psest_0496 0.70 +1.7 551,725 - Psest_0496 0.76 +0.1 551,725 - Psest_0496 0.76 -1.5 551,725 - Psest_0496 0.76 -1.2
Or see this region's nucleotide sequence