Experiment: Paraquat dichloride 0.015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2878 and Psest_2879 overlap by 4 nucleotides Psest_2879 and Psest_2880 overlap by 8 nucleotides
Psest_2878: Psest_2878 - conserved hypothetical protein, at 3,069,630 to 3,070,622
_2878
Psest_2879: Psest_2879 - Predicted deacetylase, at 3,070,619 to 3,071,380
_2879
Psest_2880: Psest_2880 - Glycosyltransferase, at 3,071,373 to 3,072,488
_2880
Position (kb)
3070
3071
3072 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3069.712 kb on + strand at 3069.713 kb on - strand at 3069.713 kb on - strand at 3069.713 kb on - strand at 3069.718 kb on + strand at 3069.718 kb on + strand at 3069.718 kb on + strand at 3069.718 kb on + strand at 3069.718 kb on + strand at 3069.718 kb on + strand at 3069.718 kb on + strand at 3069.718 kb on + strand at 3069.718 kb on + strand at 3069.718 kb on + strand at 3069.718 kb on + strand at 3069.718 kb on + strand at 3069.718 kb on + strand at 3069.718 kb on + strand at 3069.718 kb on + strand at 3069.719 kb on - strand at 3069.719 kb on - strand at 3069.719 kb on - strand at 3069.719 kb on - strand at 3069.719 kb on - strand at 3069.719 kb on - strand at 3069.719 kb on - strand at 3069.719 kb on - strand at 3069.719 kb on - strand at 3069.719 kb on - strand at 3069.719 kb on - strand at 3069.719 kb on - strand at 3069.719 kb on - strand at 3069.719 kb on - strand at 3069.719 kb on - strand at 3069.721 kb on + strand at 3069.721 kb on + strand at 3069.721 kb on + strand at 3069.722 kb on - strand at 3069.722 kb on - strand at 3069.722 kb on - strand at 3069.722 kb on - strand at 3069.722 kb on - strand at 3069.722 kb on - strand at 3069.759 kb on - strand, within Psest_2878 at 3069.903 kb on + strand, within Psest_2878 at 3070.032 kb on + strand, within Psest_2878 at 3070.033 kb on - strand, within Psest_2878 at 3070.222 kb on + strand, within Psest_2878 at 3070.222 kb on + strand, within Psest_2878 at 3070.222 kb on + strand, within Psest_2878 at 3070.222 kb on + strand, within Psest_2878 at 3070.222 kb on + strand, within Psest_2878 at 3070.222 kb on + strand, within Psest_2878 at 3070.222 kb on + strand, within Psest_2878 at 3070.223 kb on - strand, within Psest_2878 at 3070.223 kb on - strand, within Psest_2878 at 3070.223 kb on - strand, within Psest_2878 at 3070.223 kb on - strand, within Psest_2878 at 3070.223 kb on - strand, within Psest_2878 at 3070.223 kb on - strand, within Psest_2878 at 3070.223 kb on - strand, within Psest_2878 at 3070.223 kb on - strand, within Psest_2878 at 3070.223 kb on - strand, within Psest_2878 at 3070.223 kb on - strand, within Psest_2878 at 3070.223 kb on - strand, within Psest_2878 at 3070.223 kb on - strand, within Psest_2878 at 3070.285 kb on + strand, within Psest_2878 at 3070.285 kb on + strand, within Psest_2878 at 3070.286 kb on - strand, within Psest_2878 at 3070.286 kb on - strand, within Psest_2878 at 3070.286 kb on - strand, within Psest_2878 at 3070.501 kb on - strand, within Psest_2878 at 3070.720 kb on - strand, within Psest_2879 at 3070.900 kb on - strand, within Psest_2879 at 3070.923 kb on + strand, within Psest_2879 at 3070.923 kb on + strand, within Psest_2879 at 3070.923 kb on + strand, within Psest_2879 at 3070.924 kb on - strand, within Psest_2879 at 3070.924 kb on - strand, within Psest_2879 at 3071.073 kb on + strand, within Psest_2879 at 3071.073 kb on + strand, within Psest_2879 at 3071.094 kb on + strand, within Psest_2879 at 3071.094 kb on + strand, within Psest_2879 at 3071.094 kb on + strand, within Psest_2879 at 3071.094 kb on + strand, within Psest_2879 at 3071.094 kb on + strand, within Psest_2879 at 3071.095 kb on - strand, within Psest_2879 at 3071.095 kb on - strand, within Psest_2879 at 3071.095 kb on - strand, within Psest_2879 at 3071.154 kb on + strand, within Psest_2879 at 3071.155 kb on - strand, within Psest_2879 at 3071.382 kb on + strand at 3071.383 kb on - strand at 3071.383 kb on - strand at 3071.383 kb on - strand at 3071.535 kb on - strand, within Psest_2880 at 3071.717 kb on - strand, within Psest_2880 at 3071.971 kb on - strand, within Psest_2880 at 3072.067 kb on + strand, within Psest_2880 at 3072.067 kb on + strand, within Psest_2880 at 3072.098 kb on + strand, within Psest_2880 at 3072.171 kb on - strand, within Psest_2880 at 3072.173 kb on + strand, within Psest_2880 at 3072.215 kb on - strand, within Psest_2880 at 3072.215 kb on - strand, within Psest_2880 at 3072.316 kb on - strand, within Psest_2880 at 3072.328 kb on - strand, within Psest_2880 at 3072.328 kb on - strand, within Psest_2880 at 3072.328 kb on - strand, within Psest_2880 at 3072.335 kb on - strand, within Psest_2880
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.015 mg/ml remove 3,069,712 + +0.0 3,069,713 - -0.0 3,069,713 - +0.1 3,069,713 - +0.4 3,069,718 + +0.5 3,069,718 + -1.5 3,069,718 + +1.4 3,069,718 + -2.1 3,069,718 + +2.0 3,069,718 + -0.7 3,069,718 + +0.3 3,069,718 + -2.3 3,069,718 + -1.6 3,069,718 + +0.6 3,069,718 + -1.9 3,069,718 + +0.3 3,069,718 + -0.5 3,069,718 + -0.2 3,069,718 + -2.5 3,069,719 - -2.1 3,069,719 - +2.4 3,069,719 - +0.5 3,069,719 - +0.6 3,069,719 - +0.2 3,069,719 - -2.5 3,069,719 - +1.3 3,069,719 - +0.3 3,069,719 - +1.7 3,069,719 - +0.7 3,069,719 - +1.7 3,069,719 - -1.7 3,069,719 - +0.4 3,069,719 - +1.3 3,069,719 - +0.2 3,069,721 + +1.2 3,069,721 + -0.5 3,069,721 + +0.2 3,069,722 - -0.1 3,069,722 - -1.9 3,069,722 - -1.7 3,069,722 - +1.2 3,069,722 - -0.1 3,069,722 - -1.6 3,069,759 - Psest_2878 0.13 -0.0 3,069,903 + Psest_2878 0.27 +1.4 3,070,032 + Psest_2878 0.40 +0.3 3,070,033 - Psest_2878 0.41 +1.9 3,070,222 + Psest_2878 0.60 -1.3 3,070,222 + Psest_2878 0.60 -1.7 3,070,222 + Psest_2878 0.60 -1.5 3,070,222 + Psest_2878 0.60 -2.9 3,070,222 + Psest_2878 0.60 +0.1 3,070,222 + Psest_2878 0.60 +0.4 3,070,222 + Psest_2878 0.60 -3.0 3,070,223 - Psest_2878 0.60 -0.9 3,070,223 - Psest_2878 0.60 -0.9 3,070,223 - Psest_2878 0.60 -0.6 3,070,223 - Psest_2878 0.60 +0.3 3,070,223 - Psest_2878 0.60 -1.2 3,070,223 - Psest_2878 0.60 -0.8 3,070,223 - Psest_2878 0.60 +0.1 3,070,223 - Psest_2878 0.60 -1.6 3,070,223 - Psest_2878 0.60 -1.0 3,070,223 - Psest_2878 0.60 -0.7 3,070,223 - Psest_2878 0.60 +1.2 3,070,223 - Psest_2878 0.60 +1.9 3,070,285 + Psest_2878 0.66 -1.9 3,070,285 + Psest_2878 0.66 +0.4 3,070,286 - Psest_2878 0.66 -0.5 3,070,286 - Psest_2878 0.66 +0.5 3,070,286 - Psest_2878 0.66 +1.7 3,070,501 - Psest_2878 0.88 -0.8 3,070,720 - Psest_2879 0.13 -2.5 3,070,900 - Psest_2879 0.37 +0.4 3,070,923 + Psest_2879 0.40 -2.3 3,070,923 + Psest_2879 0.40 -0.6 3,070,923 + Psest_2879 0.40 -0.3 3,070,924 - Psest_2879 0.40 +0.1 3,070,924 - Psest_2879 0.40 -1.3 3,071,073 + Psest_2879 0.60 -0.8 3,071,073 + Psest_2879 0.60 -0.3 3,071,094 + Psest_2879 0.62 -0.9 3,071,094 + Psest_2879 0.62 -0.1 3,071,094 + Psest_2879 0.62 -0.1 3,071,094 + Psest_2879 0.62 -0.6 3,071,094 + Psest_2879 0.62 -1.8 3,071,095 - Psest_2879 0.62 -1.0 3,071,095 - Psest_2879 0.62 +1.9 3,071,095 - Psest_2879 0.62 +0.1 3,071,154 + Psest_2879 0.70 +0.6 3,071,155 - Psest_2879 0.70 +1.3 3,071,382 + -0.8 3,071,383 - +2.9 3,071,383 - +0.4 3,071,383 - +0.6 3,071,535 - Psest_2880 0.15 +1.5 3,071,717 - Psest_2880 0.31 +1.7 3,071,971 - Psest_2880 0.54 -0.1 3,072,067 + Psest_2880 0.62 -0.8 3,072,067 + Psest_2880 0.62 -0.3 3,072,098 + Psest_2880 0.65 -1.5 3,072,171 - Psest_2880 0.72 +1.7 3,072,173 + Psest_2880 0.72 +0.5 3,072,215 - Psest_2880 0.75 +0.7 3,072,215 - Psest_2880 0.75 -1.7 3,072,316 - Psest_2880 0.84 +0.9 3,072,328 - Psest_2880 0.86 +1.4 3,072,328 - Psest_2880 0.86 -2.7 3,072,328 - Psest_2880 0.86 +1.1 3,072,335 - Psest_2880 0.86 +1.1
Or see this region's nucleotide sequence