Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2654
Experiment: Paraquat dichloride 0.015 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Paraquat dichloride 0.015 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,836,655 | + | +0.2 | |||
2,836,656 | - | -1.0 | |||
2,836,656 | - | +3.2 | |||
2,838,936 | - | -2.6 | |||
2,839,081 | + | +1.2 | |||
2,839,081 | + | -0.3 | |||
2,839,082 | - | -0.3 | |||
2,839,082 | - | -2.8 | |||
2,839,082 | - | +0.6 | |||
2,839,082 | - | -0.1 | |||
2,839,149 | + | +0.2 | |||
2,839,149 | + | +2.9 | |||
2,839,150 | - | -1.1 | |||
2,839,155 | + | -1.1 | |||
2,839,167 | + | +0.9 | |||
2,839,188 | - | +1.2 | |||
2,839,324 | + | +1.1 | |||
2,839,345 | + | +0.9 | |||
2,839,345 | + | -2.2 | |||
2,839,346 | - | -1.6 | |||
2,839,462 | + | Psest_2655 | 0.11 | +1.4 | |
2,839,462 | + | Psest_2655 | 0.11 | +1.0 | |
2,839,462 | + | Psest_2655 | 0.11 | -0.5 | |
2,839,463 | - | Psest_2655 | 0.11 | +0.6 | |
2,839,463 | - | Psest_2655 | 0.11 | +0.8 | |
2,839,463 | - | Psest_2655 | 0.11 | +1.1 | |
2,839,463 | - | Psest_2655 | 0.11 | -0.3 | |
2,839,463 | - | Psest_2655 | 0.11 | -0.5 | |
2,839,678 | + | Psest_2655 | 0.22 | +0.0 | |
2,839,784 | - | Psest_2655 | 0.27 | -1.3 | |
2,839,784 | - | Psest_2655 | 0.27 | -1.5 | |
2,839,784 | - | Psest_2655 | 0.27 | -0.3 |
Or see this region's nucleotide sequence