Experiment: Paraquat dichloride 0.015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2034 and Psest_2035 overlap by 4 nucleotides Psest_2035 and Psest_2036 are separated by 72 nucleotides
Psest_2034: Psest_2034 - ATPase related to the helicase subunit of the Holliday junction resolvase, at 2,155,159 to 2,156,484
_2034
Psest_2035: Psest_2035 - crcB protein, at 2,156,481 to 2,156,855
_2035
Psest_2036: Psest_2036 - seryl-tRNA synthetase, at 2,156,928 to 2,158,208
_2036
Position (kb)
2156
2157 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2155.537 kb on + strand, within Psest_2034 at 2155.630 kb on + strand, within Psest_2034 at 2155.630 kb on + strand, within Psest_2034 at 2155.630 kb on + strand, within Psest_2034 at 2155.631 kb on - strand, within Psest_2034 at 2155.631 kb on - strand, within Psest_2034 at 2155.904 kb on - strand, within Psest_2034 at 2155.934 kb on + strand, within Psest_2034 at 2156.006 kb on - strand, within Psest_2034 at 2156.006 kb on - strand, within Psest_2034 at 2156.006 kb on - strand, within Psest_2034 at 2156.024 kb on + strand, within Psest_2034 at 2156.024 kb on + strand, within Psest_2034 at 2156.024 kb on + strand, within Psest_2034 at 2156.024 kb on + strand, within Psest_2034 at 2156.024 kb on + strand, within Psest_2034 at 2156.025 kb on - strand, within Psest_2034 at 2156.025 kb on - strand, within Psest_2034 at 2156.025 kb on - strand, within Psest_2034 at 2156.153 kb on - strand, within Psest_2034 at 2156.186 kb on - strand, within Psest_2034 at 2156.186 kb on - strand, within Psest_2034 at 2156.241 kb on - strand, within Psest_2034 at 2156.308 kb on + strand, within Psest_2034 at 2156.350 kb on + strand, within Psest_2034 at 2156.350 kb on + strand, within Psest_2034 at 2156.465 kb on + strand at 2156.466 kb on - strand at 2156.466 kb on - strand at 2156.466 kb on - strand at 2156.583 kb on + strand, within Psest_2035 at 2156.584 kb on - strand, within Psest_2035 at 2156.584 kb on - strand, within Psest_2035 at 2156.637 kb on + strand, within Psest_2035 at 2156.637 kb on + strand, within Psest_2035 at 2156.787 kb on + strand, within Psest_2035 at 2156.874 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Paraquat dichloride 0.015 mg/ml remove 2,155,537 + Psest_2034 0.29 -0.1 2,155,630 + Psest_2034 0.36 +0.7 2,155,630 + Psest_2034 0.36 +1.6 2,155,630 + Psest_2034 0.36 +0.5 2,155,631 - Psest_2034 0.36 +1.2 2,155,631 - Psest_2034 0.36 -0.1 2,155,904 - Psest_2034 0.56 +2.0 2,155,934 + Psest_2034 0.58 -0.6 2,156,006 - Psest_2034 0.64 +0.5 2,156,006 - Psest_2034 0.64 +1.2 2,156,006 - Psest_2034 0.64 -2.5 2,156,024 + Psest_2034 0.65 +0.4 2,156,024 + Psest_2034 0.65 -0.1 2,156,024 + Psest_2034 0.65 -2.7 2,156,024 + Psest_2034 0.65 -0.2 2,156,024 + Psest_2034 0.65 -1.1 2,156,025 - Psest_2034 0.65 +3.1 2,156,025 - Psest_2034 0.65 -0.5 2,156,025 - Psest_2034 0.65 +0.9 2,156,153 - Psest_2034 0.75 -1.9 2,156,186 - Psest_2034 0.77 +0.2 2,156,186 - Psest_2034 0.77 +1.4 2,156,241 - Psest_2034 0.82 +2.2 2,156,308 + Psest_2034 0.87 -1.7 2,156,350 + Psest_2034 0.90 -1.0 2,156,350 + Psest_2034 0.90 -0.8 2,156,465 + -0.4 2,156,466 - -1.5 2,156,466 - -1.0 2,156,466 - -1.4 2,156,583 + Psest_2035 0.27 -1.1 2,156,584 - Psest_2035 0.27 -0.2 2,156,584 - Psest_2035 0.27 -0.2 2,156,637 + Psest_2035 0.42 +0.4 2,156,637 + Psest_2035 0.42 +0.0 2,156,787 + Psest_2035 0.82 -0.6 2,156,874 + +0.8
Or see this region's nucleotide sequence