Experiment: Fusidic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4400 and Psest_4401 overlap by 4 nucleotides Psest_4401 and Psest_4402 are separated by 72 nucleotides Psest_4402 and Psest_4403 are separated by 109 nucleotides Psest_4403 and Psest_4404 are separated by 969 nucleotides
Psest_4400: Psest_4400 - hypothetical protein, at 4,635 to 4,802
_4400
Psest_4401: Psest_4401 - hypothetical protein, at 4,799 to 5,005
_4401
Psest_4402: Psest_4402 - hypothetical protein, at 5,078 to 5,221
_4402
Psest_4403: Psest_4403 - hypothetical protein, at 5,331 to 5,651
_4403
Psest_4404: Psest_4404 - hypothetical protein, at 6,621 to 6,893
_4404
Position (kb) 5
6 Strain fitness (log2 ratio) -2
-1
0
1
2
3
4 at 5.092 kb on + strand at 5.092 kb on + strand at 5.092 kb on + strand at 5.092 kb on + strand at 5.092 kb on + strand at 5.092 kb on + strand at 5.092 kb on + strand at 5.092 kb on + strand at 5.235 kb on + strand at 5.235 kb on + strand at 5.259 kb on + strand at 5.380 kb on + strand, within Psest_4403 at 5.380 kb on + strand, within Psest_4403 at 5.380 kb on + strand, within Psest_4403 at 5.380 kb on + strand, within Psest_4403 at 5.380 kb on + strand, within Psest_4403 at 5.380 kb on + strand, within Psest_4403 at 5.380 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.383 kb on + strand, within Psest_4403 at 5.457 kb on + strand, within Psest_4403 at 5.457 kb on + strand, within Psest_4403 at 5.572 kb on + strand, within Psest_4403 at 5.572 kb on + strand, within Psest_4403 at 5.572 kb on + strand, within Psest_4403 at 5.572 kb on + strand, within Psest_4403 at 5.572 kb on + strand, within Psest_4403 at 5.572 kb on + strand, within Psest_4403 at 5.572 kb on + strand, within Psest_4403 at 5.572 kb on + strand, within Psest_4403 at 5.572 kb on + strand, within Psest_4403 at 5.572 kb on + strand, within Psest_4403 at 5.572 kb on + strand, within Psest_4403 at 5.572 kb on + strand, within Psest_4403 at 5.572 kb on + strand, within Psest_4403 at 5.572 kb on + strand, within Psest_4403 at 5.572 kb on + strand, within Psest_4403 at 5.573 kb on - strand, within Psest_4403 at 5.649 kb on + strand at 5.649 kb on + strand at 5.649 kb on + strand at 5.649 kb on + strand at 5.649 kb on + strand at 5.649 kb on + strand at 5.649 kb on + strand at 5.694 kb on + strand at 5.694 kb on + strand at 5.694 kb on + strand at 5.694 kb on + strand at 5.694 kb on + strand at 5.694 kb on + strand at 5.694 kb on + strand at 5.694 kb on + strand at 5.694 kb on + strand at 5.694 kb on + strand at 5.694 kb on + strand at 5.694 kb on + strand at 5.790 kb on + strand at 5.790 kb on + strand at 5.790 kb on + strand at 5.790 kb on + strand at 5.790 kb on + strand at 5.843 kb on + strand at 5.850 kb on + strand at 5.850 kb on + strand at 5.850 kb on + strand at 5.850 kb on + strand at 5.850 kb on + strand at 5.900 kb on + strand at 5.900 kb on + strand at 5.900 kb on + strand at 5.900 kb on + strand at 5.900 kb on + strand at 5.900 kb on + strand at 5.900 kb on + strand at 5.900 kb on + strand at 5.900 kb on + strand at 5.900 kb on + strand at 5.900 kb on + strand at 5.900 kb on + strand at 5.900 kb on + strand at 5.998 kb on + strand at 5.998 kb on + strand at 5.998 kb on + strand at 5.998 kb on + strand at 5.998 kb on + strand at 5.998 kb on + strand at 5.998 kb on + strand at 5.998 kb on + strand at 5.998 kb on + strand at 5.998 kb on + strand at 5.998 kb on + strand at 5.998 kb on + strand at 5.998 kb on + strand at 5.998 kb on + strand at 5.998 kb on + strand at 5.999 kb on - strand at 5.999 kb on - strand at 6.040 kb on + strand at 6.040 kb on + strand at 6.040 kb on + strand at 6.040 kb on + strand at 6.040 kb on + strand at 6.041 kb on - strand at 6.081 kb on + strand at 6.081 kb on + strand at 6.081 kb on + strand at 6.081 kb on + strand at 6.108 kb on + strand at 6.108 kb on + strand at 6.240 kb on + strand at 6.240 kb on + strand at 6.331 kb on + strand at 6.349 kb on + strand at 6.349 kb on + strand at 6.349 kb on + strand at 6.349 kb on + strand at 6.350 kb on - strand at 6.356 kb on + strand at 6.356 kb on + strand at 6.356 kb on + strand at 6.356 kb on + strand at 6.447 kb on + strand at 6.447 kb on + strand at 6.447 kb on + strand at 6.447 kb on + strand at 6.447 kb on + strand at 6.498 kb on + strand at 6.498 kb on + strand at 6.498 kb on + strand at 6.498 kb on + strand at 6.509 kb on + strand at 6.509 kb on + strand at 6.509 kb on + strand at 6.509 kb on + strand at 6.509 kb on + strand at 6.509 kb on + strand at 6.509 kb on + strand at 6.509 kb on + strand at 6.509 kb on + strand at 6.509 kb on + strand at 6.509 kb on + strand at 6.510 kb on - strand at 6.510 kb on - strand at 6.522 kb on + strand at 6.584 kb on + strand at 6.638 kb on + strand at 6.638 kb on + strand at 6.638 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.016 mg/ml remove 5,092 + -0.4 5,092 + -0.7 5,092 + -0.3 5,092 + -0.1 5,092 + +0.4 5,092 + +0.2 5,092 + -0.7 5,092 + +1.7 5,235 + -0.2 5,235 + +0.5 5,259 + +0.7 5,380 + Psest_4403 0.15 +0.7 5,380 + Psest_4403 0.15 -0.1 5,380 + Psest_4403 0.15 +3.6 5,380 + Psest_4403 0.15 +1.8 5,380 + Psest_4403 0.15 -0.3 5,380 + Psest_4403 0.15 +1.0 5,380 + Psest_4403 0.15 +1.0 5,383 + Psest_4403 0.16 +1.3 5,383 + Psest_4403 0.16 +3.5 5,383 + Psest_4403 0.16 +2.1 5,383 + Psest_4403 0.16 +0.5 5,383 + Psest_4403 0.16 -0.1 5,383 + Psest_4403 0.16 -0.8 5,383 + Psest_4403 0.16 +1.0 5,383 + Psest_4403 0.16 +1.5 5,383 + Psest_4403 0.16 +1.8 5,383 + Psest_4403 0.16 +1.3 5,383 + Psest_4403 0.16 +0.7 5,383 + Psest_4403 0.16 +0.5 5,383 + Psest_4403 0.16 +0.4 5,383 + Psest_4403 0.16 -1.3 5,383 + Psest_4403 0.16 -0.1 5,383 + Psest_4403 0.16 -0.5 5,383 + Psest_4403 0.16 +1.5 5,383 + Psest_4403 0.16 +4.2 5,383 + Psest_4403 0.16 -0.3 5,383 + Psest_4403 0.16 +1.6 5,383 + Psest_4403 0.16 +0.3 5,383 + Psest_4403 0.16 +1.9 5,383 + Psest_4403 0.16 -1.4 5,383 + Psest_4403 0.16 -0.7 5,383 + Psest_4403 0.16 -0.3 5,383 + Psest_4403 0.16 -0.5 5,383 + Psest_4403 0.16 +1.3 5,383 + Psest_4403 0.16 +1.5 5,457 + Psest_4403 0.39 +2.5 5,457 + Psest_4403 0.39 +1.5 5,572 + Psest_4403 0.75 -0.5 5,572 + Psest_4403 0.75 -0.1 5,572 + Psest_4403 0.75 +0.2 5,572 + Psest_4403 0.75 -2.2 5,572 + Psest_4403 0.75 +0.4 5,572 + Psest_4403 0.75 -0.1 5,572 + Psest_4403 0.75 +0.7 5,572 + Psest_4403 0.75 +2.1 5,572 + Psest_4403 0.75 +0.9 5,572 + Psest_4403 0.75 +0.2 5,572 + Psest_4403 0.75 +0.6 5,572 + Psest_4403 0.75 -0.5 5,572 + Psest_4403 0.75 +1.5 5,572 + Psest_4403 0.75 -0.2 5,572 + Psest_4403 0.75 +0.5 5,573 - Psest_4403 0.75 -0.5 5,649 + +0.3 5,649 + +1.8 5,649 + +0.2 5,649 + +0.3 5,649 + +0.4 5,649 + +0.3 5,649 + +0.2 5,694 + +0.5 5,694 + -0.1 5,694 + -2.3 5,694 + -1.0 5,694 + -2.3 5,694 + +0.9 5,694 + +1.8 5,694 + +0.2 5,694 + +2.0 5,694 + -0.9 5,694 + -0.8 5,694 + +4.1 5,790 + +0.9 5,790 + -0.3 5,790 + +1.3 5,790 + +1.8 5,790 + +2.2 5,843 + +1.5 5,850 + -0.4 5,850 + +2.3 5,850 + -1.7 5,850 + -1.4 5,850 + -0.5 5,900 + +2.2 5,900 + -0.5 5,900 + -1.4 5,900 + -1.8 5,900 + -0.1 5,900 + -1.2 5,900 + +1.3 5,900 + -1.0 5,900 + +0.8 5,900 + +2.2 5,900 + +0.0 5,900 + -0.1 5,900 + +0.2 5,998 + +0.2 5,998 + -0.6 5,998 + +0.7 5,998 + -0.1 5,998 + -0.2 5,998 + +0.4 5,998 + -0.4 5,998 + +0.9 5,998 + +0.3 5,998 + +2.0 5,998 + +0.3 5,998 + -2.0 5,998 + +0.3 5,998 + -0.3 5,998 + -0.3 5,999 - -1.4 5,999 - -1.3 6,040 + +2.8 6,040 + +0.5 6,040 + +2.0 6,040 + +0.6 6,040 + -0.8 6,041 - +2.5 6,081 + +1.9 6,081 + +2.3 6,081 + +0.0 6,081 + -0.8 6,108 + +0.0 6,108 + -0.4 6,240 + +0.2 6,240 + -0.1 6,331 + +1.3 6,349 + +0.5 6,349 + +0.5 6,349 + +1.5 6,349 + +0.9 6,350 - +1.9 6,356 + -0.7 6,356 + -1.2 6,356 + -0.5 6,356 + +0.9 6,447 + -0.7 6,447 + +3.4 6,447 + +1.5 6,447 + -0.5 6,447 + -0.3 6,498 + +0.3 6,498 + +3.9 6,498 + -1.0 6,498 + -0.8 6,509 + +1.1 6,509 + -0.7 6,509 + -0.7 6,509 + +1.5 6,509 + +2.5 6,509 + +1.2 6,509 + +2.1 6,509 + +3.1 6,509 + -0.3 6,509 + +0.9 6,509 + +0.5 6,510 - +3.1 6,510 - +1.5 6,522 + +1.8 6,584 + -0.3 6,638 + +1.2 6,638 + -1.3 6,638 + -0.8
Or see this region's nucleotide sequence