Experiment: Fusidic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4313 and Psest_4314 are separated by 264 nucleotides Psest_4314 and Psest_4315 overlap by 1 nucleotides Psest_4315 and Psest_4316 are separated by 58 nucleotides
Psest_4313: Psest_4313 - Catalase, at 4,511,894 to 4,514,029
_4313
Psest_4314: Psest_4314 - ABC-type metal ion transport system, ATPase component, at 4,514,294 to 4,515,301
_4314
Psest_4315: Psest_4315 - ABC-type metal ion transport system, permease component, at 4,515,301 to 4,515,978
_4315
Psest_4316: Psest_4316 - ABC-type metal ion transport system, periplasmic component/surface antigen, at 4,516,037 to 4,516,807
_4316
Position (kb)
4514
4515
4516 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 4513.321 kb on + strand, within Psest_4313 at 4513.321 kb on + strand, within Psest_4313 at 4513.321 kb on + strand, within Psest_4313 at 4513.321 kb on + strand, within Psest_4313 at 4513.321 kb on + strand, within Psest_4313 at 4513.321 kb on + strand, within Psest_4313 at 4513.321 kb on + strand, within Psest_4313 at 4513.321 kb on + strand, within Psest_4313 at 4513.321 kb on + strand, within Psest_4313 at 4513.321 kb on + strand, within Psest_4313 at 4513.321 kb on + strand, within Psest_4313 at 4513.322 kb on - strand, within Psest_4313 at 4513.322 kb on - strand, within Psest_4313 at 4513.322 kb on - strand, within Psest_4313 at 4513.322 kb on - strand, within Psest_4313 at 4513.322 kb on - strand, within Psest_4313 at 4513.322 kb on - strand, within Psest_4313 at 4513.322 kb on - strand, within Psest_4313 at 4513.322 kb on - strand, within Psest_4313 at 4513.322 kb on - strand, within Psest_4313 at 4513.726 kb on - strand, within Psest_4313 at 4514.043 kb on + strand at 4514.170 kb on + strand at 4514.170 kb on + strand at 4514.171 kb on - strand at 4514.172 kb on + strand at 4514.172 kb on + strand at 4514.172 kb on + strand at 4514.173 kb on - strand at 4514.173 kb on - strand at 4514.233 kb on + strand at 4514.705 kb on + strand, within Psest_4314 at 4515.116 kb on + strand, within Psest_4314 at 4515.116 kb on + strand, within Psest_4314 at 4515.116 kb on + strand, within Psest_4314 at 4515.116 kb on + strand, within Psest_4314 at 4515.116 kb on + strand, within Psest_4314 at 4515.116 kb on + strand, within Psest_4314 at 4515.117 kb on - strand, within Psest_4314 at 4515.117 kb on - strand, within Psest_4314 at 4515.117 kb on - strand, within Psest_4314 at 4515.117 kb on - strand, within Psest_4314 at 4515.117 kb on - strand, within Psest_4314 at 4515.117 kb on - strand, within Psest_4314 at 4515.117 kb on - strand, within Psest_4314 at 4515.161 kb on + strand, within Psest_4314 at 4515.162 kb on - strand, within Psest_4314 at 4515.207 kb on - strand at 4515.315 kb on + strand at 4515.315 kb on + strand at 4515.316 kb on - strand at 4515.481 kb on + strand, within Psest_4315 at 4515.481 kb on + strand, within Psest_4315 at 4515.668 kb on + strand, within Psest_4315 at 4515.668 kb on + strand, within Psest_4315 at 4515.668 kb on + strand, within Psest_4315 at 4515.802 kb on + strand, within Psest_4315 at 4515.803 kb on - strand, within Psest_4315 at 4515.803 kb on - strand, within Psest_4315 at 4515.976 kb on + strand at 4515.976 kb on + strand at 4516.202 kb on + strand, within Psest_4316 at 4516.202 kb on + strand, within Psest_4316 at 4516.203 kb on - strand, within Psest_4316 at 4516.203 kb on - strand, within Psest_4316 at 4516.268 kb on + strand, within Psest_4316
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.016 mg/ml remove 4,513,321 + Psest_4313 0.67 -0.4 4,513,321 + Psest_4313 0.67 -0.1 4,513,321 + Psest_4313 0.67 +0.9 4,513,321 + Psest_4313 0.67 +0.6 4,513,321 + Psest_4313 0.67 +0.1 4,513,321 + Psest_4313 0.67 +1.6 4,513,321 + Psest_4313 0.67 -0.2 4,513,321 + Psest_4313 0.67 +0.3 4,513,321 + Psest_4313 0.67 +0.4 4,513,321 + Psest_4313 0.67 +2.0 4,513,321 + Psest_4313 0.67 +2.2 4,513,322 - Psest_4313 0.67 +0.0 4,513,322 - Psest_4313 0.67 -1.2 4,513,322 - Psest_4313 0.67 -0.6 4,513,322 - Psest_4313 0.67 +2.9 4,513,322 - Psest_4313 0.67 -0.6 4,513,322 - Psest_4313 0.67 +1.4 4,513,322 - Psest_4313 0.67 +0.1 4,513,322 - Psest_4313 0.67 -1.1 4,513,322 - Psest_4313 0.67 -0.4 4,513,726 - Psest_4313 0.86 +1.8 4,514,043 + -1.6 4,514,170 + +0.6 4,514,170 + -0.0 4,514,171 - +1.0 4,514,172 + +1.2 4,514,172 + +2.8 4,514,172 + -0.3 4,514,173 - +1.3 4,514,173 - +0.3 4,514,233 + -1.4 4,514,705 + Psest_4314 0.41 +0.8 4,515,116 + Psest_4314 0.82 -0.6 4,515,116 + Psest_4314 0.82 +0.6 4,515,116 + Psest_4314 0.82 -0.6 4,515,116 + Psest_4314 0.82 +2.6 4,515,116 + Psest_4314 0.82 -0.6 4,515,116 + Psest_4314 0.82 -0.0 4,515,117 - Psest_4314 0.82 +1.2 4,515,117 - Psest_4314 0.82 +0.8 4,515,117 - Psest_4314 0.82 +1.8 4,515,117 - Psest_4314 0.82 +0.3 4,515,117 - Psest_4314 0.82 -0.5 4,515,117 - Psest_4314 0.82 +3.2 4,515,117 - Psest_4314 0.82 -1.6 4,515,161 + Psest_4314 0.86 +0.8 4,515,162 - Psest_4314 0.86 +3.1 4,515,207 - +0.4 4,515,315 + +2.8 4,515,315 + +0.2 4,515,316 - +0.4 4,515,481 + Psest_4315 0.27 +0.8 4,515,481 + Psest_4315 0.27 +0.9 4,515,668 + Psest_4315 0.54 +1.0 4,515,668 + Psest_4315 0.54 -0.1 4,515,668 + Psest_4315 0.54 +1.2 4,515,802 + Psest_4315 0.74 +2.6 4,515,803 - Psest_4315 0.74 +0.2 4,515,803 - Psest_4315 0.74 -0.7 4,515,976 + -0.2 4,515,976 + -1.0 4,516,202 + Psest_4316 0.21 -2.0 4,516,202 + Psest_4316 0.21 +1.9 4,516,203 - Psest_4316 0.22 +1.0 4,516,203 - Psest_4316 0.22 -1.3 4,516,268 + Psest_4316 0.30 -0.5
Or see this region's nucleotide sequence