Experiment: Fusidic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_0017 and Psest_0018 overlap by 4 nucleotides Psest_0018 and Psest_0019 are separated by 120 nucleotides Psest_0019 and Psest_0020 are separated by 330 nucleotides
Psest_0017: Psest_0017 - ectoine/hydroxyectoine ABC transporter, permease protein EhuD, at 17,631 to 18,290
_0017
Psest_0018: Psest_0018 - ectoine/hydroxyectoine ABC transporter, permease protein EhuC, at 18,287 to 18,946
_0018
Psest_0019: Psest_0019 - ectoine/hydroxyectoine ABC transporter solute-binding protein, at 19,067 to 19,924
_0019
Psest_0020: Psest_0020 - K+ transport systems, NAD-binding component, at 20,255 to 21,628
_0020
Position (kb) 19
20 Strain fitness (log2 ratio) -2
-1
0
1
2 at 18.073 kb on + strand, within Psest_0017 at 18.073 kb on + strand, within Psest_0017 at 18.074 kb on - strand, within Psest_0017 at 18.074 kb on - strand, within Psest_0017 at 18.375 kb on + strand, within Psest_0018 at 18.375 kb on + strand, within Psest_0018 at 18.375 kb on + strand, within Psest_0018 at 18.375 kb on + strand, within Psest_0018 at 18.375 kb on + strand, within Psest_0018 at 18.375 kb on + strand, within Psest_0018 at 18.375 kb on + strand, within Psest_0018 at 18.375 kb on + strand, within Psest_0018 at 18.376 kb on - strand, within Psest_0018 at 18.376 kb on - strand, within Psest_0018 at 18.376 kb on - strand, within Psest_0018 at 18.376 kb on - strand, within Psest_0018 at 18.376 kb on - strand, within Psest_0018 at 18.376 kb on - strand, within Psest_0018 at 18.744 kb on + strand, within Psest_0018 at 18.744 kb on + strand, within Psest_0018 at 18.744 kb on + strand, within Psest_0018 at 18.745 kb on - strand, within Psest_0018 at 18.795 kb on + strand, within Psest_0018 at 18.795 kb on + strand, within Psest_0018 at 18.795 kb on + strand, within Psest_0018 at 18.795 kb on + strand, within Psest_0018 at 18.795 kb on + strand, within Psest_0018 at 18.795 kb on + strand, within Psest_0018 at 18.795 kb on + strand, within Psest_0018 at 18.795 kb on + strand, within Psest_0018 at 18.795 kb on + strand, within Psest_0018 at 18.795 kb on + strand, within Psest_0018 at 18.795 kb on + strand, within Psest_0018 at 18.795 kb on + strand, within Psest_0018 at 18.795 kb on + strand, within Psest_0018 at 18.795 kb on + strand, within Psest_0018 at 18.795 kb on + strand, within Psest_0018 at 18.795 kb on + strand, within Psest_0018 at 18.796 kb on - strand, within Psest_0018 at 18.796 kb on - strand, within Psest_0018 at 18.796 kb on - strand, within Psest_0018 at 19.494 kb on + strand, within Psest_0019 at 19.494 kb on + strand, within Psest_0019 at 19.495 kb on - strand, within Psest_0019 at 19.571 kb on + strand, within Psest_0019 at 19.571 kb on + strand, within Psest_0019 at 19.571 kb on + strand, within Psest_0019 at 19.571 kb on + strand, within Psest_0019 at 19.572 kb on - strand, within Psest_0019 at 19.572 kb on - strand, within Psest_0019 at 19.572 kb on - strand, within Psest_0019 at 19.599 kb on + strand, within Psest_0019 at 19.599 kb on + strand, within Psest_0019 at 19.599 kb on + strand, within Psest_0019 at 19.599 kb on + strand, within Psest_0019 at 19.599 kb on + strand, within Psest_0019 at 19.599 kb on + strand, within Psest_0019 at 19.599 kb on + strand, within Psest_0019 at 19.599 kb on + strand, within Psest_0019 at 19.599 kb on + strand, within Psest_0019 at 19.599 kb on + strand, within Psest_0019 at 19.599 kb on + strand, within Psest_0019 at 19.599 kb on + strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.600 kb on - strand, within Psest_0019 at 19.715 kb on + strand, within Psest_0019 at 19.715 kb on + strand, within Psest_0019 at 19.715 kb on + strand, within Psest_0019 at 19.761 kb on + strand, within Psest_0019 at 19.946 kb on + strand at 19.947 kb on - strand at 19.947 kb on - strand at 19.947 kb on - strand at 19.971 kb on - strand at 20.031 kb on - strand at 20.451 kb on - strand, within Psest_0020 at 20.765 kb on + strand, within Psest_0020 at 20.766 kb on - strand, within Psest_0020
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.016 mg/ml remove 18,073 + Psest_0017 0.67 +0.1 18,073 + Psest_0017 0.67 -0.2 18,074 - Psest_0017 0.67 +1.4 18,074 - Psest_0017 0.67 -0.4 18,375 + Psest_0018 0.13 -0.3 18,375 + Psest_0018 0.13 +1.0 18,375 + Psest_0018 0.13 -0.3 18,375 + Psest_0018 0.13 +0.8 18,375 + Psest_0018 0.13 +0.7 18,375 + Psest_0018 0.13 -0.0 18,375 + Psest_0018 0.13 +0.5 18,375 + Psest_0018 0.13 -0.5 18,376 - Psest_0018 0.13 -0.0 18,376 - Psest_0018 0.13 -0.6 18,376 - Psest_0018 0.13 +0.0 18,376 - Psest_0018 0.13 -1.2 18,376 - Psest_0018 0.13 -1.5 18,376 - Psest_0018 0.13 +0.7 18,744 + Psest_0018 0.69 +0.7 18,744 + Psest_0018 0.69 -0.6 18,744 + Psest_0018 0.69 +0.6 18,745 - Psest_0018 0.69 -0.7 18,795 + Psest_0018 0.77 +1.7 18,795 + Psest_0018 0.77 +0.7 18,795 + Psest_0018 0.77 -1.1 18,795 + Psest_0018 0.77 -0.1 18,795 + Psest_0018 0.77 +0.8 18,795 + Psest_0018 0.77 -0.4 18,795 + Psest_0018 0.77 -1.5 18,795 + Psest_0018 0.77 +0.7 18,795 + Psest_0018 0.77 -0.2 18,795 + Psest_0018 0.77 +1.6 18,795 + Psest_0018 0.77 +2.4 18,795 + Psest_0018 0.77 -0.6 18,795 + Psest_0018 0.77 +0.5 18,795 + Psest_0018 0.77 +0.3 18,795 + Psest_0018 0.77 +1.2 18,795 + Psest_0018 0.77 +0.4 18,796 - Psest_0018 0.77 -0.5 18,796 - Psest_0018 0.77 -0.6 18,796 - Psest_0018 0.77 -0.3 19,494 + Psest_0019 0.50 -1.2 19,494 + Psest_0019 0.50 +1.2 19,495 - Psest_0019 0.50 +0.1 19,571 + Psest_0019 0.59 +2.3 19,571 + Psest_0019 0.59 -0.7 19,571 + Psest_0019 0.59 +1.2 19,571 + Psest_0019 0.59 -0.7 19,572 - Psest_0019 0.59 +0.0 19,572 - Psest_0019 0.59 +0.1 19,572 - Psest_0019 0.59 -0.2 19,599 + Psest_0019 0.62 -0.6 19,599 + Psest_0019 0.62 +1.1 19,599 + Psest_0019 0.62 -0.7 19,599 + Psest_0019 0.62 +1.0 19,599 + Psest_0019 0.62 -0.4 19,599 + Psest_0019 0.62 -0.2 19,599 + Psest_0019 0.62 +1.2 19,599 + Psest_0019 0.62 -1.0 19,599 + Psest_0019 0.62 -0.3 19,599 + Psest_0019 0.62 -1.2 19,599 + Psest_0019 0.62 +0.9 19,599 + Psest_0019 0.62 -1.0 19,600 - Psest_0019 0.62 -1.3 19,600 - Psest_0019 0.62 +0.9 19,600 - Psest_0019 0.62 -0.4 19,600 - Psest_0019 0.62 +0.5 19,600 - Psest_0019 0.62 +1.1 19,600 - Psest_0019 0.62 -0.7 19,600 - Psest_0019 0.62 +0.3 19,600 - Psest_0019 0.62 -2.5 19,600 - Psest_0019 0.62 +0.4 19,600 - Psest_0019 0.62 -1.8 19,600 - Psest_0019 0.62 +0.3 19,600 - Psest_0019 0.62 +0.9 19,600 - Psest_0019 0.62 -0.1 19,600 - Psest_0019 0.62 +0.1 19,600 - Psest_0019 0.62 +0.8 19,600 - Psest_0019 0.62 +1.3 19,600 - Psest_0019 0.62 +0.6 19,600 - Psest_0019 0.62 +0.6 19,600 - Psest_0019 0.62 +0.8 19,600 - Psest_0019 0.62 +1.6 19,600 - Psest_0019 0.62 -0.4 19,600 - Psest_0019 0.62 +0.0 19,600 - Psest_0019 0.62 -1.0 19,600 - Psest_0019 0.62 -0.4 19,600 - Psest_0019 0.62 -1.1 19,600 - Psest_0019 0.62 -0.1 19,600 - Psest_0019 0.62 -0.2 19,600 - Psest_0019 0.62 +0.6 19,600 - Psest_0019 0.62 +0.6 19,600 - Psest_0019 0.62 +0.5 19,600 - Psest_0019 0.62 -0.5 19,600 - Psest_0019 0.62 +0.5 19,600 - Psest_0019 0.62 +0.5 19,715 + Psest_0019 0.76 -0.7 19,715 + Psest_0019 0.76 +1.3 19,715 + Psest_0019 0.76 +1.3 19,761 + Psest_0019 0.81 +1.0 19,946 + +1.0 19,947 - +0.2 19,947 - -0.2 19,947 - +0.2 19,971 - +0.8 20,031 - +1.8 20,451 - Psest_0020 0.14 -1.5 20,765 + Psest_0020 0.37 -0.6 20,766 - Psest_0020 0.37 -1.6
Or see this region's nucleotide sequence