Experiment: Fusidic 0.016 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1655 and Psest_1656 are separated by 3 nucleotides Psest_1656 and Psest_1657 overlap by 8 nucleotides Psest_1657 and Psest_1658 are separated by 2 nucleotides
Psest_1655: Psest_1655 - NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit, at 1,764,872 to 1,766,209
_1655
Psest_1656: Psest_1656 - NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit, at 1,766,213 to 1,767,424
_1656
Psest_1657: Psest_1657 - NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit, at 1,767,417 to 1,768,211
_1657
Psest_1658: Psest_1658 - NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit, at 1,768,214 to 1,768,882
_1658
Position (kb)
1766
1767
1768 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1765.877 kb on + strand, within Psest_1655 at 1765.877 kb on + strand, within Psest_1655 at 1765.877 kb on + strand, within Psest_1655 at 1765.877 kb on + strand, within Psest_1655 at 1765.877 kb on + strand, within Psest_1655 at 1765.919 kb on + strand, within Psest_1655 at 1765.919 kb on + strand, within Psest_1655 at 1765.919 kb on + strand, within Psest_1655 at 1765.919 kb on + strand, within Psest_1655 at 1765.919 kb on + strand, within Psest_1655 at 1765.919 kb on + strand, within Psest_1655 at 1765.919 kb on + strand, within Psest_1655 at 1765.919 kb on + strand, within Psest_1655 at 1765.919 kb on + strand, within Psest_1655 at 1765.919 kb on + strand, within Psest_1655 at 1765.919 kb on + strand, within Psest_1655 at 1765.919 kb on + strand, within Psest_1655 at 1765.920 kb on - strand, within Psest_1655 at 1765.920 kb on - strand, within Psest_1655 at 1765.920 kb on - strand, within Psest_1655 at 1765.920 kb on - strand, within Psest_1655 at 1765.921 kb on + strand, within Psest_1655 at 1766.135 kb on + strand at 1766.135 kb on + strand at 1766.135 kb on + strand at 1766.135 kb on + strand at 1766.270 kb on + strand at 1766.401 kb on + strand, within Psest_1656 at 1766.576 kb on + strand, within Psest_1656 at 1766.576 kb on + strand, within Psest_1656 at 1766.591 kb on + strand, within Psest_1656 at 1766.591 kb on + strand, within Psest_1656 at 1767.172 kb on + strand, within Psest_1656 at 1767.172 kb on + strand, within Psest_1656 at 1767.415 kb on + strand at 1767.415 kb on + strand at 1767.415 kb on + strand at 1767.422 kb on + strand at 1767.798 kb on + strand, within Psest_1657 at 1767.798 kb on + strand, within Psest_1657 at 1767.798 kb on + strand, within Psest_1657 at 1767.800 kb on + strand, within Psest_1657 at 1767.800 kb on + strand, within Psest_1657 at 1767.800 kb on + strand, within Psest_1657 at 1768.187 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Fusidic 0.016 mg/ml remove 1,765,877 + Psest_1655 0.75 +1.3 1,765,877 + Psest_1655 0.75 -1.0 1,765,877 + Psest_1655 0.75 +1.3 1,765,877 + Psest_1655 0.75 +3.0 1,765,877 + Psest_1655 0.75 -0.7 1,765,919 + Psest_1655 0.78 -0.3 1,765,919 + Psest_1655 0.78 +1.7 1,765,919 + Psest_1655 0.78 +2.4 1,765,919 + Psest_1655 0.78 -0.7 1,765,919 + Psest_1655 0.78 +1.5 1,765,919 + Psest_1655 0.78 +0.3 1,765,919 + Psest_1655 0.78 -1.7 1,765,919 + Psest_1655 0.78 +0.5 1,765,919 + Psest_1655 0.78 -2.2 1,765,919 + Psest_1655 0.78 +1.9 1,765,919 + Psest_1655 0.78 -0.3 1,765,919 + Psest_1655 0.78 -1.4 1,765,920 - Psest_1655 0.78 +0.3 1,765,920 - Psest_1655 0.78 +2.9 1,765,920 - Psest_1655 0.78 +0.8 1,765,920 - Psest_1655 0.78 +0.3 1,765,921 + Psest_1655 0.78 +3.7 1,766,135 + -0.7 1,766,135 + +1.6 1,766,135 + +0.1 1,766,135 + -0.3 1,766,270 + -2.3 1,766,401 + Psest_1656 0.16 +1.8 1,766,576 + Psest_1656 0.30 +0.7 1,766,576 + Psest_1656 0.30 -0.8 1,766,591 + Psest_1656 0.31 +1.6 1,766,591 + Psest_1656 0.31 -0.5 1,767,172 + Psest_1656 0.79 -1.7 1,767,172 + Psest_1656 0.79 +3.4 1,767,415 + +1.3 1,767,415 + +2.5 1,767,415 + -0.7 1,767,422 + +2.9 1,767,798 + Psest_1657 0.48 -1.5 1,767,798 + Psest_1657 0.48 -1.0 1,767,798 + Psest_1657 0.48 +0.5 1,767,800 + Psest_1657 0.48 +0.9 1,767,800 + Psest_1657 0.48 +2.6 1,767,800 + Psest_1657 0.48 -1.3 1,768,187 + +1.3
Or see this region's nucleotide sequence