Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_1216

Experiment: Fusidic 0.016 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Fusidic 0.016 mg/ml
1,321,226	+				-1.5
1,321,227	-				+1.4
1,321,285	+				-0.3
1,321,286	-				+0.4
1,321,286	-				-0.5
1,321,286	-				+0.5
1,321,286	-				-0.5
1,321,436	+		Psest_1215	0.32	-1.5
1,321,436	+		Psest_1215	0.32	-0.5
1,321,436	+		Psest_1215	0.32	+1.1
1,321,437	-		Psest_1215	0.32	+2.3
1,321,437	-		Psest_1215	0.32	-1.8
1,321,880	+				-0.8
1,321,881	-				+0.8
1,321,892	+				-0.3
1,321,892	+				+0.2
1,321,892	+				-1.3
1,321,892	+				-1.5
1,321,893	-				-1.1
1,321,893	-				+1.2
1,321,893	-				+0.7
1,321,893	-				+0.4
1,321,899	+				-0.7
1,321,900	-				-1.3
1,321,900	-				-0.2
1,322,136	+				+1.7
1,322,136	+				-0.4
1,322,137	-				+2.0
1,322,137	-				+0.4
1,322,137	-				+0.0
1,322,137	-				-1.2
1,322,137	-				-0.3
1,322,153	+				+0.8
1,322,154	-				-2.3
1,322,206	+				+0.9
1,322,206	+				-0.2
1,322,229	+		Psest_1216	0.10	+0.1
1,322,229	+		Psest_1216	0.10	+1.9
1,322,230	-		Psest_1216	0.10	+1.6
1,322,230	-		Psest_1216	0.10	+0.3
1,322,862	+		Psest_1216	0.34	-0.8
1,322,863	-		Psest_1216	0.34	+0.2
1,323,387	-		Psest_1216	0.53	+0.7
1,323,550	+		Psest_1216	0.59	+1.4
1,323,550	+		Psest_1216	0.59	-2.1
1,323,551	-		Psest_1216	0.59	+0.3
1,324,315	+		Psest_1216	0.87	-0.0
1,324,315	+		Psest_1216	0.87	+0.3
1,324,315	+		Psest_1216	0.87	-0.6
1,324,316	-		Psest_1216	0.87	+0.7
1,324,319	+		Psest_1216	0.87	+0.0
1,324,319	+		Psest_1216	0.87	+0.7
1,324,319	+		Psest_1216	0.87	+1.5
1,324,319	+		Psest_1216	0.87	-0.6
1,324,319	+		Psest_1216	0.87	-1.1
1,324,319	+		Psest_1216	0.87	+1.7
1,324,319	+		Psest_1216	0.87	-0.6
1,324,319	+		Psest_1216	0.87	+0.2
1,324,319	+		Psest_1216	0.87	+2.3
1,324,319	+		Psest_1216	0.87	-0.6
1,324,320	-		Psest_1216	0.87	+0.2
1,324,320	-		Psest_1216	0.87	+0.7
1,324,378	+		Psest_1216	0.89	-0.8
1,324,378	+		Psest_1216	0.89	-0.5
1,324,378	+		Psest_1216	0.89	+1.2
1,324,378	+		Psest_1216	0.89	+1.8
1,324,378	+		Psest_1216	0.89	-0.3
1,324,379	-		Psest_1216	0.90	+1.5
1,324,379	-		Psest_1216	0.90	+1.8
1,324,403	+				-1.1
1,324,403	+				+0.6
1,324,403	+				+0.1
1,324,403	+				-0.2
1,324,403	+				+0.5
1,324,403	+				-1.7
1,324,404	-				+1.0
1,324,404	-				-0.3
1,324,520	+				-0.0
1,324,520	+				-0.4
1,324,521	-				+1.0
1,324,578	+				-1.6
1,324,722	+				+1.1
1,324,722	+				-0.3
1,324,722	+				-1.1
1,324,722	+				-1.8
1,324,723	-				+0.1
1,324,723	-				+0.0
1,324,723	-				+1.5
1,324,723	-				+0.9
1,324,723	-				-0.9
1,324,792	+				+3.2
1,324,792	+				+0.2
1,324,792	+				-0.1
1,324,803	+				-2.9
1,324,806	+				-0.5
1,324,875	+		Psest_1217	0.13	-0.6
1,324,876	-		Psest_1217	0.13	+0.3
1,324,876	-		Psest_1217	0.13	-1.5
1,324,995	+		Psest_1217	0.21	-1.0
1,325,070	+		Psest_1217	0.26	+1.1
1,325,071	-		Psest_1217	0.26	+0.1
1,325,332	-		Psest_1217	0.44	-0.6
1,325,358	+		Psest_1217	0.46	-0.3
1,325,514	+		Psest_1217	0.57	+0.1
1,325,514	+		Psest_1217	0.57	-0.0
1,325,514	+		Psest_1217	0.57	-0.1
1,325,515	-		Psest_1217	0.57	+0.0