Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_0926

Experiment: Bacitracin 0.25 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Bacitracin 0.25 mg/ml
1,003,051	+		Psest_0923	0.84	-1.5
1,003,089	+				-1.8
1,003,089	+				-1.4
1,003,089	+				-1.5
1,003,089	+				+0.6
1,003,090	-				+1.1
1,003,140	+				-1.6
1,003,169	+				-1.5
1,003,169	+				+0.6
1,003,169	+				-0.6
1,003,169	+				+1.0
1,003,169	+				+1.7
1,003,169	+				+1.2
1,003,169	+				+0.2
1,003,169	+				-1.6
1,003,169	+				-0.4
1,003,169	+				-2.2
1,003,169	+				+1.6
1,003,169	+				+0.5
1,003,169	+				-2.1
1,003,169	+				+1.4
1,003,169	+				-0.2
1,003,169	+				+0.5
1,003,169	+				-0.1
1,003,169	+				+1.4
1,003,169	+				+0.8
1,003,169	+				-0.1
1,003,169	+				-1.4
1,003,169	+				+3.1
1,003,169	+				+0.3
1,003,169	+				-0.9
1,003,169	+				-0.7
1,003,169	+				-0.1
1,003,169	+				-0.2
1,003,169	+				-0.0
1,003,169	+				+0.5
1,003,169	+				-0.4
1,003,169	+				+0.6
1,003,169	+				-4.3
1,003,169	+				+0.5
1,003,169	+				-0.4
1,003,169	+				+1.4
1,003,170	-				-1.0
1,003,170	-				-2.3
1,003,170	-				+0.1
1,003,170	-				-0.2
1,003,170	-				+0.3
1,003,170	-				+0.4
1,003,170	-				-1.2
1,003,170	-				-0.3
1,003,170	-				+2.8
1,003,170	-				+0.3
1,003,170	-				-1.6
1,003,170	-				+0.7
1,003,170	-				-1.7
1,003,170	-				-0.5
1,003,170	-				-0.7
1,003,170	-				+0.6
1,003,170	-				-1.0
1,003,170	-				+0.3
1,003,170	-				-0.1
1,003,170	-				-1.4
1,003,170	-				-0.2
1,003,170	-				+2.3
1,003,170	-				-1.0
1,003,170	-				+0.3
1,003,170	-				-0.1
1,003,170	-				+0.1
1,003,170	-				-1.4
1,003,170	-				+0.6
1,003,170	-				-0.0
1,003,170	-				+0.9
1,003,170	-				-1.6
1,003,170	-				+0.6
1,003,170	-				+0.3
1,003,170	-				+0.8
1,003,170	-				+1.6
1,003,170	-				-0.4
1,003,170	-				-1.2
1,003,170	-				-1.8
1,003,170	-				-1.3
1,003,198	+				-0.9
1,003,199	-				-1.2
1,003,424	+				+0.1
1,003,471	+				-1.0
1,003,517	+				-1.2
1,003,581	+				+0.2
1,003,582	-				-1.1
1,003,582	-				+1.8
1,003,640	+				+0.1
1,003,640	+				+1.1
1,003,646	+				-1.7
1,003,688	-		Psest_0925	0.11	-1.1
1,003,693	-		Psest_0925	0.13	-0.5
1,003,693	-		Psest_0925	0.13	+0.8
1,003,775	+		Psest_0925	0.41	-0.4
1,003,776	-		Psest_0925	0.42	+0.0
1,003,776	-		Psest_0925	0.42	-2.6
1,003,776	-		Psest_0925	0.42	+0.3
1,003,848	+		Psest_0925	0.66	+1.7
1,003,849	-		Psest_0925	0.67	-0.2
1,004,003	+				-1.2
1,004,003	+				-0.0
1,004,003	+				+0.7
1,004,004	-				-2.2
1,004,007	+				+0.5
1,004,007	+				-1.0
1,004,007	+				-1.6
1,004,007	+				-2.4
1,004,008	-				-0.4
1,004,008	-				-0.4
1,004,008	-				-0.3
1,004,008	-				-1.0
1,004,008	-				+0.6
1,004,008	-				-2.3
1,004,122	+		Psest_0926	0.11	-1.0
1,004,123	-		Psest_0926	0.11	-1.7
1,004,150	+		Psest_0926	0.14	-2.6
1,004,150	+		Psest_0926	0.14	+1.0
1,004,151	-		Psest_0926	0.14	+0.5
1,004,220	+		Psest_0926	0.22	+1.0
1,004,220	+		Psest_0926	0.22	-0.3
1,004,221	-		Psest_0926	0.22	+0.5
1,004,221	-		Psest_0926	0.22	+0.7
1,004,221	-		Psest_0926	0.22	-0.3
1,004,240	-		Psest_0926	0.24	-0.2
1,004,297	-		Psest_0926	0.30	+1.2
1,004,317	-		Psest_0926	0.32	+1.9
1,004,317	-		Psest_0926	0.32	-0.4
1,004,317	-		Psest_0926	0.32	+0.6
1,004,368	+		Psest_0926	0.38	+3.3
1,004,369	-		Psest_0926	0.38	+0.3
1,004,369	-		Psest_0926	0.38	-0.3
1,004,431	+		Psest_0926	0.44	+0.0
1,004,431	+		Psest_0926	0.44	+0.3
1,004,432	-		Psest_0926	0.45	+3.0
1,004,512	+		Psest_0926	0.53	-1.6
1,004,545	-		Psest_0926	0.57	+0.5
1,004,628	+		Psest_0926	0.66	-0.7
1,004,629	-		Psest_0926	0.66	-0.1
1,004,629	-		Psest_0926	0.66	+0.7
1,004,723	+		Psest_0926	0.76	+1.1
1,004,753	-		Psest_0926	0.79	+0.1
1,004,753	-		Psest_0926	0.79	-1.0
1,005,032	+				-1.6
1,005,032	+				-1.0
1,005,033	-				+0.5
1,005,033	-				-0.6
1,005,033	-				-0.9
1,005,066	-				-1.5
1,005,082	-				+1.2
1,005,137	+				-0.2
1,005,224	+		Psest_0927	0.17	+0.3
1,005,265	+		Psest_0927	0.21	-1.5
1,005,265	+		Psest_0927	0.21	+0.0
1,005,265	+		Psest_0927	0.21	-0.3
1,005,321	+		Psest_0927	0.26	+0.6
1,005,321	+		Psest_0927	0.26	+0.8
1,005,321	+		Psest_0927	0.26	+3.1
1,005,321	+		Psest_0927	0.26	-1.3
1,005,322	-		Psest_0927	0.26	+2.5
1,005,322	-		Psest_0927	0.26	-2.6
1,005,322	-		Psest_0927	0.26	+0.3
1,005,322	-		Psest_0927	0.26	-1.6
1,005,322	-		Psest_0927	0.26	+0.4
1,005,351	+		Psest_0927	0.29	+1.8
1,005,351	+		Psest_0927	0.29	+1.7
1,005,351	+		Psest_0927	0.29	-0.2
1,005,351	+		Psest_0927	0.29	-0.9
1,005,352	-		Psest_0927	0.29	-0.0
1,005,352	-		Psest_0927	0.29	-1.5
1,005,380	+		Psest_0927	0.32	-1.2
1,005,380	+		Psest_0927	0.32	+1.5
1,005,380	+		Psest_0927	0.32	-1.3
1,005,381	-		Psest_0927	0.32	-0.2
1,005,381	-		Psest_0927	0.32	+1.8
1,005,381	-		Psest_0927	0.32	+0.1
1,005,682	+		Psest_0927	0.62	+0.4
1,005,682	+		Psest_0927	0.62	+2.3
1,005,682	+		Psest_0927	0.62	-1.0
1,005,682	+		Psest_0927	0.62	-0.1
1,005,683	-		Psest_0927	0.62	-0.4
1,005,741	+		Psest_0927	0.68	+1.6
1,005,741	+		Psest_0927	0.68	-0.2
1,005,741	+		Psest_0927	0.68	-0.1
1,005,741	+		Psest_0927	0.68	-1.2
1,005,741	+		Psest_0927	0.68	-1.6
1,005,742	-		Psest_0927	0.68	-0.6
1,005,742	-		Psest_0927	0.68	+0.5
1,005,742	-		Psest_0927	0.68	-0.7
1,005,742	-		Psest_0927	0.68	-2.1
1,005,742	-		Psest_0927	0.68	+0.5
1,005,742	-		Psest_0927	0.68	-0.3
1,005,742	-		Psest_0927	0.68	-1.6
1,005,742	-		Psest_0927	0.68	+0.2
1,005,879	+		Psest_0927	0.81	-0.9