Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4232 and Psest_4233 are separated by 350 nucleotides Psest_4233 and Psest_4234 are separated by 12 nucleotides
Psest_4232: Psest_4232 - Sugar phosphate permease, at 4,413,158 to 4,414,516
_4232
Psest_4233: Psest_4233 - Acyl-CoA dehydrogenases, at 4,414,867 to 4,416,009
_4233
Psest_4234: Psest_4234 - Acyl-CoA dehydrogenases, at 4,416,022 to 4,417,218
_4234
Position (kb)
4414
4415
4416
4417 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4 at 4413.951 kb on - strand, within Psest_4232 at 4413.951 kb on - strand, within Psest_4232 at 4413.951 kb on - strand, within Psest_4232 at 4413.951 kb on - strand, within Psest_4232 at 4413.951 kb on - strand, within Psest_4232 at 4414.130 kb on + strand, within Psest_4232 at 4414.130 kb on + strand, within Psest_4232 at 4414.268 kb on + strand, within Psest_4232 at 4414.268 kb on + strand, within Psest_4232 at 4414.268 kb on + strand, within Psest_4232 at 4414.269 kb on - strand, within Psest_4232 at 4414.269 kb on - strand, within Psest_4232 at 4414.269 kb on - strand, within Psest_4232 at 4414.269 kb on - strand, within Psest_4232 at 4414.269 kb on - strand, within Psest_4232 at 4414.364 kb on + strand, within Psest_4232 at 4414.539 kb on - strand at 4414.539 kb on - strand at 4414.555 kb on + strand at 4414.618 kb on + strand at 4414.618 kb on + strand at 4414.640 kb on - strand at 4414.640 kb on - strand at 4414.743 kb on - strand at 4414.770 kb on + strand at 4414.847 kb on + strand at 4414.847 kb on + strand at 4414.847 kb on + strand at 4414.847 kb on + strand at 4414.847 kb on + strand at 4414.847 kb on + strand at 4414.847 kb on + strand at 4414.847 kb on + strand at 4414.847 kb on + strand at 4414.847 kb on + strand at 4414.847 kb on + strand at 4414.847 kb on + strand at 4414.848 kb on - strand at 4414.848 kb on - strand at 4414.848 kb on - strand at 4414.848 kb on - strand at 4414.848 kb on - strand at 4414.848 kb on - strand at 4414.848 kb on - strand at 4414.892 kb on + strand at 4414.892 kb on + strand at 4414.892 kb on + strand at 4414.893 kb on - strand at 4414.970 kb on + strand at 4414.970 kb on + strand at 4414.970 kb on + strand at 4414.970 kb on + strand at 4414.970 kb on + strand at 4414.970 kb on + strand at 4414.970 kb on + strand at 4414.971 kb on - strand at 4414.971 kb on - strand at 4414.971 kb on - strand at 4415.048 kb on + strand, within Psest_4233 at 4415.048 kb on + strand, within Psest_4233 at 4415.048 kb on + strand, within Psest_4233 at 4415.048 kb on + strand, within Psest_4233 at 4415.048 kb on + strand, within Psest_4233 at 4415.048 kb on + strand, within Psest_4233 at 4415.048 kb on + strand, within Psest_4233 at 4415.048 kb on + strand, within Psest_4233 at 4415.048 kb on + strand, within Psest_4233 at 4415.048 kb on + strand, within Psest_4233 at 4415.048 kb on + strand, within Psest_4233 at 4415.048 kb on + strand, within Psest_4233 at 4415.048 kb on + strand, within Psest_4233 at 4415.048 kb on + strand, within Psest_4233 at 4415.049 kb on - strand, within Psest_4233 at 4415.049 kb on - strand, within Psest_4233 at 4415.049 kb on - strand, within Psest_4233 at 4415.049 kb on - strand, within Psest_4233 at 4415.049 kb on - strand, within Psest_4233 at 4415.049 kb on - strand, within Psest_4233 at 4415.049 kb on - strand, within Psest_4233 at 4415.049 kb on - strand, within Psest_4233 at 4415.049 kb on - strand, within Psest_4233 at 4415.049 kb on - strand, within Psest_4233 at 4415.049 kb on - strand, within Psest_4233 at 4415.049 kb on - strand, within Psest_4233 at 4415.049 kb on - strand, within Psest_4233 at 4415.225 kb on + strand, within Psest_4233 at 4415.225 kb on + strand, within Psest_4233 at 4415.599 kb on + strand, within Psest_4233 at 4415.599 kb on + strand, within Psest_4233 at 4415.599 kb on + strand, within Psest_4233 at 4415.599 kb on + strand, within Psest_4233 at 4415.599 kb on + strand, within Psest_4233 at 4415.600 kb on - strand, within Psest_4233 at 4415.600 kb on - strand, within Psest_4233 at 4415.600 kb on - strand, within Psest_4233 at 4415.600 kb on - strand, within Psest_4233 at 4415.616 kb on - strand, within Psest_4233 at 4416.023 kb on + strand at 4416.024 kb on - strand at 4416.107 kb on + strand at 4416.107 kb on + strand at 4416.107 kb on + strand at 4416.108 kb on - strand at 4416.108 kb on - strand at 4416.108 kb on - strand at 4416.108 kb on - strand at 4416.108 kb on - strand at 4416.132 kb on - strand at 4416.132 kb on - strand at 4416.158 kb on + strand, within Psest_4234 at 4416.159 kb on - strand, within Psest_4234 at 4416.228 kb on + strand, within Psest_4234 at 4416.228 kb on + strand, within Psest_4234 at 4416.229 kb on - strand, within Psest_4234 at 4416.503 kb on + strand, within Psest_4234 at 4416.503 kb on + strand, within Psest_4234 at 4416.503 kb on + strand, within Psest_4234 at 4416.504 kb on - strand, within Psest_4234 at 4416.767 kb on + strand, within Psest_4234 at 4416.767 kb on + strand, within Psest_4234 at 4416.767 kb on + strand, within Psest_4234 at 4416.767 kb on + strand, within Psest_4234 at 4416.767 kb on + strand, within Psest_4234 at 4416.768 kb on - strand, within Psest_4234 at 4416.871 kb on - strand, within Psest_4234 at 4416.881 kb on + strand, within Psest_4234 at 4416.882 kb on - strand, within Psest_4234
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 4,413,951 - Psest_4232 0.58 -0.6 4,413,951 - Psest_4232 0.58 -0.1 4,413,951 - Psest_4232 0.58 -1.1 4,413,951 - Psest_4232 0.58 -1.9 4,413,951 - Psest_4232 0.58 -0.7 4,414,130 + Psest_4232 0.72 -0.5 4,414,130 + Psest_4232 0.72 -0.5 4,414,268 + Psest_4232 0.82 -1.0 4,414,268 + Psest_4232 0.82 +1.4 4,414,268 + Psest_4232 0.82 -0.0 4,414,269 - Psest_4232 0.82 -0.5 4,414,269 - Psest_4232 0.82 -1.6 4,414,269 - Psest_4232 0.82 +0.2 4,414,269 - Psest_4232 0.82 +0.8 4,414,269 - Psest_4232 0.82 -2.0 4,414,364 + Psest_4232 0.89 +0.3 4,414,539 - +0.5 4,414,539 - -1.0 4,414,555 + -0.9 4,414,618 + +0.0 4,414,618 + +0.5 4,414,640 - +0.4 4,414,640 - -1.4 4,414,743 - +0.9 4,414,770 + +0.0 4,414,847 + -1.8 4,414,847 + -0.2 4,414,847 + +0.1 4,414,847 + +0.7 4,414,847 + -0.8 4,414,847 + -0.9 4,414,847 + -1.1 4,414,847 + +2.7 4,414,847 + -1.3 4,414,847 + +0.7 4,414,847 + -0.5 4,414,847 + -0.1 4,414,848 - -1.6 4,414,848 - -1.0 4,414,848 - +0.7 4,414,848 - -2.4 4,414,848 - +0.5 4,414,848 - -2.7 4,414,848 - -1.4 4,414,892 + -0.3 4,414,892 + -2.8 4,414,892 + -0.6 4,414,893 - +0.4 4,414,970 + -0.9 4,414,970 + -0.3 4,414,970 + +0.8 4,414,970 + -0.9 4,414,970 + +0.3 4,414,970 + -1.5 4,414,970 + -0.7 4,414,971 - +0.8 4,414,971 - -1.7 4,414,971 - -3.4 4,415,048 + Psest_4233 0.16 +1.1 4,415,048 + Psest_4233 0.16 +2.7 4,415,048 + Psest_4233 0.16 -0.4 4,415,048 + Psest_4233 0.16 -1.1 4,415,048 + Psest_4233 0.16 -1.3 4,415,048 + Psest_4233 0.16 +1.2 4,415,048 + Psest_4233 0.16 -1.0 4,415,048 + Psest_4233 0.16 -1.1 4,415,048 + Psest_4233 0.16 -0.7 4,415,048 + Psest_4233 0.16 +0.5 4,415,048 + Psest_4233 0.16 -0.5 4,415,048 + Psest_4233 0.16 +1.5 4,415,048 + Psest_4233 0.16 -2.9 4,415,048 + Psest_4233 0.16 -1.3 4,415,049 - Psest_4233 0.16 -1.7 4,415,049 - Psest_4233 0.16 -0.5 4,415,049 - Psest_4233 0.16 -0.8 4,415,049 - Psest_4233 0.16 +1.7 4,415,049 - Psest_4233 0.16 +1.1 4,415,049 - Psest_4233 0.16 -1.0 4,415,049 - Psest_4233 0.16 -1.8 4,415,049 - Psest_4233 0.16 +3.2 4,415,049 - Psest_4233 0.16 +0.2 4,415,049 - Psest_4233 0.16 +0.3 4,415,049 - Psest_4233 0.16 -0.1 4,415,049 - Psest_4233 0.16 +0.2 4,415,049 - Psest_4233 0.16 +2.4 4,415,225 + Psest_4233 0.31 +1.7 4,415,225 + Psest_4233 0.31 +0.2 4,415,599 + Psest_4233 0.64 +4.1 4,415,599 + Psest_4233 0.64 +1.5 4,415,599 + Psest_4233 0.64 +0.1 4,415,599 + Psest_4233 0.64 -0.4 4,415,599 + Psest_4233 0.64 -1.3 4,415,600 - Psest_4233 0.64 -1.7 4,415,600 - Psest_4233 0.64 -0.8 4,415,600 - Psest_4233 0.64 +0.4 4,415,600 - Psest_4233 0.64 -1.3 4,415,616 - Psest_4233 0.66 +0.5 4,416,023 + -0.8 4,416,024 - -1.3 4,416,107 + -1.9 4,416,107 + +2.3 4,416,107 + +0.6 4,416,108 - -0.7 4,416,108 - +0.9 4,416,108 - +0.8 4,416,108 - +0.1 4,416,108 - +0.4 4,416,132 - +2.2 4,416,132 - +0.9 4,416,158 + Psest_4234 0.11 +0.8 4,416,159 - Psest_4234 0.11 -0.1 4,416,228 + Psest_4234 0.17 +0.3 4,416,228 + Psest_4234 0.17 -1.5 4,416,229 - Psest_4234 0.17 -1.5 4,416,503 + Psest_4234 0.40 +0.3 4,416,503 + Psest_4234 0.40 -0.7 4,416,503 + Psest_4234 0.40 -1.1 4,416,504 - Psest_4234 0.40 -0.6 4,416,767 + Psest_4234 0.62 +1.0 4,416,767 + Psest_4234 0.62 +2.0 4,416,767 + Psest_4234 0.62 -0.6 4,416,767 + Psest_4234 0.62 +1.3 4,416,767 + Psest_4234 0.62 -0.3 4,416,768 - Psest_4234 0.62 -2.2 4,416,871 - Psest_4234 0.71 -0.1 4,416,881 + Psest_4234 0.72 -0.3 4,416,882 - Psest_4234 0.72 +0.4
Or see this region's nucleotide sequence