Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2961 and Psest_2962 are separated by 14 nucleotides Psest_2962 and Psest_2963 are separated by 84 nucleotides Psest_2963 and Psest_2964 are separated by 35 nucleotides
Psest_2961: Psest_2961 - Flagellar basal-body P-ring protein, at 3,157,427 to 3,158,527
_2961
Psest_2962: Psest_2962 - Flagellar basal body L-ring protein, at 3,158,542 to 3,159,237
_2962
Psest_2963: Psest_2963 - flagellar basal-body rod protein FlgG, Gram-negative bacteria, at 3,159,322 to 3,160,107
_2963
Psest_2964: Psest_2964 - flagellar basal-body rod protein FlgF, at 3,160,143 to 3,160,883
_2964
Position (kb)
3158
3159
3160 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3
4
5 at 3157.818 kb on + strand, within Psest_2961 at 3157.819 kb on - strand, within Psest_2961 at 3157.819 kb on - strand, within Psest_2961 at 3157.972 kb on + strand, within Psest_2961 at 3157.973 kb on - strand, within Psest_2961 at 3158.124 kb on + strand, within Psest_2961 at 3158.290 kb on + strand, within Psest_2961 at 3158.433 kb on - strand at 3158.631 kb on + strand, within Psest_2962 at 3158.631 kb on + strand, within Psest_2962 at 3158.631 kb on + strand, within Psest_2962 at 3158.631 kb on + strand, within Psest_2962 at 3158.631 kb on + strand, within Psest_2962 at 3158.631 kb on + strand, within Psest_2962 at 3158.631 kb on + strand, within Psest_2962 at 3158.631 kb on + strand, within Psest_2962 at 3158.632 kb on - strand, within Psest_2962 at 3158.632 kb on - strand, within Psest_2962 at 3158.632 kb on - strand, within Psest_2962 at 3158.632 kb on - strand, within Psest_2962 at 3158.632 kb on - strand, within Psest_2962 at 3158.680 kb on - strand, within Psest_2962 at 3158.867 kb on + strand, within Psest_2962 at 3158.991 kb on + strand, within Psest_2962 at 3158.992 kb on - strand, within Psest_2962 at 3159.063 kb on - strand, within Psest_2962 at 3159.089 kb on + strand, within Psest_2962 at 3159.089 kb on + strand, within Psest_2962 at 3159.089 kb on + strand, within Psest_2962 at 3159.089 kb on + strand, within Psest_2962 at 3159.090 kb on - strand, within Psest_2962 at 3159.146 kb on + strand, within Psest_2962 at 3159.146 kb on + strand, within Psest_2962 at 3159.146 kb on + strand, within Psest_2962 at 3159.147 kb on - strand, within Psest_2962 at 3159.147 kb on - strand, within Psest_2962 at 3159.149 kb on + strand, within Psest_2962 at 3159.150 kb on - strand, within Psest_2962 at 3159.237 kb on + strand at 3159.237 kb on + strand at 3159.238 kb on - strand at 3159.301 kb on + strand at 3159.302 kb on - strand at 3159.302 kb on - strand at 3159.303 kb on + strand at 3159.303 kb on + strand at 3159.303 kb on + strand at 3159.303 kb on + strand at 3159.303 kb on + strand at 3159.303 kb on + strand at 3159.303 kb on + strand at 3159.304 kb on - strand at 3159.304 kb on - strand at 3159.304 kb on - strand at 3159.304 kb on - strand at 3159.304 kb on - strand at 3159.304 kb on - strand at 3159.304 kb on - strand at 3159.304 kb on - strand at 3159.466 kb on + strand, within Psest_2963 at 3159.466 kb on + strand, within Psest_2963 at 3159.467 kb on - strand, within Psest_2963 at 3159.753 kb on + strand, within Psest_2963 at 3159.753 kb on + strand, within Psest_2963 at 3159.767 kb on + strand, within Psest_2963 at 3159.790 kb on + strand, within Psest_2963 at 3159.790 kb on + strand, within Psest_2963 at 3159.791 kb on - strand, within Psest_2963 at 3159.972 kb on - strand, within Psest_2963 at 3160.021 kb on + strand, within Psest_2963 at 3160.021 kb on + strand, within Psest_2963 at 3160.021 kb on + strand, within Psest_2963 at 3160.021 kb on + strand, within Psest_2963 at 3160.021 kb on + strand, within Psest_2963 at 3160.022 kb on - strand, within Psest_2963 at 3160.022 kb on - strand, within Psest_2963 at 3160.022 kb on - strand, within Psest_2963 at 3160.022 kb on - strand, within Psest_2963 at 3160.022 kb on - strand, within Psest_2963 at 3160.022 kb on - strand, within Psest_2963 at 3160.145 kb on - strand at 3160.145 kb on - strand at 3160.206 kb on + strand at 3160.207 kb on - strand at 3160.207 kb on - strand at 3160.207 kb on - strand at 3160.207 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 3,157,818 + Psest_2961 0.36 +2.1 3,157,819 - Psest_2961 0.36 -2.7 3,157,819 - Psest_2961 0.36 -0.5 3,157,972 + Psest_2961 0.50 +2.1 3,157,973 - Psest_2961 0.50 -0.2 3,158,124 + Psest_2961 0.63 +1.9 3,158,290 + Psest_2961 0.78 +3.1 3,158,433 - +1.6 3,158,631 + Psest_2962 0.13 +4.2 3,158,631 + Psest_2962 0.13 +3.5 3,158,631 + Psest_2962 0.13 +2.4 3,158,631 + Psest_2962 0.13 +2.3 3,158,631 + Psest_2962 0.13 +1.7 3,158,631 + Psest_2962 0.13 +3.2 3,158,631 + Psest_2962 0.13 +2.4 3,158,631 + Psest_2962 0.13 +2.9 3,158,632 - Psest_2962 0.13 -3.0 3,158,632 - Psest_2962 0.13 -0.1 3,158,632 - Psest_2962 0.13 -1.2 3,158,632 - Psest_2962 0.13 -3.2 3,158,632 - Psest_2962 0.13 -3.1 3,158,680 - Psest_2962 0.20 -0.5 3,158,867 + Psest_2962 0.47 +2.2 3,158,991 + Psest_2962 0.65 +4.0 3,158,992 - Psest_2962 0.65 +0.4 3,159,063 - Psest_2962 0.75 +1.3 3,159,089 + Psest_2962 0.79 +3.7 3,159,089 + Psest_2962 0.79 +4.8 3,159,089 + Psest_2962 0.79 +2.7 3,159,089 + Psest_2962 0.79 +3.4 3,159,090 - Psest_2962 0.79 +3.2 3,159,146 + Psest_2962 0.87 +1.7 3,159,146 + Psest_2962 0.87 -2.0 3,159,146 + Psest_2962 0.87 +1.6 3,159,147 - Psest_2962 0.87 +0.0 3,159,147 - Psest_2962 0.87 +1.8 3,159,149 + Psest_2962 0.87 +2.7 3,159,150 - Psest_2962 0.87 +2.4 3,159,237 + +3.1 3,159,237 + +2.6 3,159,238 - -1.1 3,159,301 + +3.4 3,159,302 - +1.5 3,159,302 - -1.3 3,159,303 + +3.3 3,159,303 + -1.0 3,159,303 + +1.5 3,159,303 + +1.1 3,159,303 + +3.2 3,159,303 + +4.8 3,159,303 + -1.3 3,159,304 - -2.0 3,159,304 - -1.5 3,159,304 - -0.3 3,159,304 - +1.5 3,159,304 - +1.4 3,159,304 - -0.2 3,159,304 - +1.2 3,159,304 - +0.6 3,159,466 + Psest_2963 0.18 +2.8 3,159,466 + Psest_2963 0.18 +2.6 3,159,467 - Psest_2963 0.18 -0.8 3,159,753 + Psest_2963 0.55 -0.5 3,159,753 + Psest_2963 0.55 +2.1 3,159,767 + Psest_2963 0.57 +4.0 3,159,790 + Psest_2963 0.60 +1.8 3,159,790 + Psest_2963 0.60 +2.6 3,159,791 - Psest_2963 0.60 -0.7 3,159,972 - Psest_2963 0.83 -0.6 3,160,021 + Psest_2963 0.89 +2.6 3,160,021 + Psest_2963 0.89 +2.9 3,160,021 + Psest_2963 0.89 +2.0 3,160,021 + Psest_2963 0.89 +4.1 3,160,021 + Psest_2963 0.89 +4.2 3,160,022 - Psest_2963 0.89 +2.1 3,160,022 - Psest_2963 0.89 +1.0 3,160,022 - Psest_2963 0.89 +1.8 3,160,022 - Psest_2963 0.89 +1.4 3,160,022 - Psest_2963 0.89 +1.0 3,160,022 - Psest_2963 0.89 +1.5 3,160,145 - +0.0 3,160,145 - -0.0 3,160,206 + +2.7 3,160,207 - -1.4 3,160,207 - -2.5 3,160,207 - -0.5 3,160,207 - -1.1
Or see this region's nucleotide sequence