Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2936 and Psest_2937 are separated by 101 nucleotides Psest_2937 and Psest_2938 are separated by 241 nucleotides
Psest_2936: Psest_2936 - Cyanate permease, at 3,133,388 to 3,134,545
_2936
Psest_2937: Psest_2937 - Short-chain alcohol dehydrogenase of unknown specificity, at 3,134,647 to 3,135,456
_2937
Psest_2938: Psest_2938 - transporter, SSS family, at 3,135,698 to 3,137,353
_2938
Position (kb)
3134
3135
3136 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 3133.706 kb on + strand, within Psest_2936 at 3133.706 kb on + strand, within Psest_2936 at 3133.707 kb on - strand, within Psest_2936 at 3133.891 kb on - strand, within Psest_2936 at 3133.891 kb on - strand, within Psest_2936 at 3133.891 kb on - strand, within Psest_2936 at 3133.891 kb on - strand, within Psest_2936 at 3133.917 kb on + strand, within Psest_2936 at 3133.917 kb on + strand, within Psest_2936 at 3133.918 kb on - strand, within Psest_2936 at 3133.918 kb on - strand, within Psest_2936 at 3134.103 kb on - strand, within Psest_2936 at 3134.175 kb on + strand, within Psest_2936 at 3134.175 kb on + strand, within Psest_2936 at 3134.176 kb on - strand, within Psest_2936 at 3134.176 kb on - strand, within Psest_2936 at 3134.474 kb on - strand at 3134.563 kb on - strand at 3134.591 kb on + strand at 3134.702 kb on + strand at 3134.702 kb on + strand at 3134.801 kb on + strand, within Psest_2937 at 3134.801 kb on + strand, within Psest_2937 at 3134.802 kb on - strand, within Psest_2937 at 3134.802 kb on - strand, within Psest_2937 at 3135.008 kb on + strand, within Psest_2937 at 3135.009 kb on - strand, within Psest_2937 at 3135.269 kb on + strand, within Psest_2937 at 3135.269 kb on + strand, within Psest_2937 at 3135.270 kb on - strand, within Psest_2937 at 3135.270 kb on - strand, within Psest_2937 at 3135.450 kb on + strand at 3135.598 kb on - strand at 3135.620 kb on - strand at 3135.682 kb on + strand at 3135.682 kb on + strand at 3135.683 kb on - strand at 3135.683 kb on - strand at 3135.683 kb on - strand at 3135.683 kb on - strand at 3135.683 kb on - strand at 3135.683 kb on - strand at 3135.689 kb on - strand at 3135.861 kb on + strand at 3135.993 kb on + strand, within Psest_2938 at 3135.993 kb on + strand, within Psest_2938 at 3135.993 kb on + strand, within Psest_2938 at 3135.993 kb on + strand, within Psest_2938 at 3135.993 kb on + strand, within Psest_2938 at 3135.994 kb on - strand, within Psest_2938 at 3135.994 kb on - strand, within Psest_2938 at 3136.188 kb on + strand, within Psest_2938 at 3136.188 kb on + strand, within Psest_2938 at 3136.189 kb on - strand, within Psest_2938 at 3136.189 kb on - strand, within Psest_2938 at 3136.189 kb on - strand, within Psest_2938 at 3136.189 kb on - strand, within Psest_2938 at 3136.189 kb on - strand, within Psest_2938 at 3136.411 kb on + strand, within Psest_2938 at 3136.412 kb on - strand, within Psest_2938 at 3136.424 kb on - strand, within Psest_2938 at 3136.425 kb on + strand, within Psest_2938 at 3136.425 kb on + strand, within Psest_2938 at 3136.425 kb on + strand, within Psest_2938 at 3136.425 kb on + strand, within Psest_2938 at 3136.425 kb on + strand, within Psest_2938 at 3136.425 kb on + strand, within Psest_2938 at 3136.425 kb on + strand, within Psest_2938 at 3136.425 kb on + strand, within Psest_2938 at 3136.425 kb on + strand, within Psest_2938 at 3136.425 kb on + strand, within Psest_2938 at 3136.426 kb on - strand, within Psest_2938 at 3136.426 kb on - strand, within Psest_2938 at 3136.426 kb on - strand, within Psest_2938 at 3136.426 kb on - strand, within Psest_2938 at 3136.426 kb on - strand, within Psest_2938 at 3136.426 kb on - strand, within Psest_2938 at 3136.426 kb on - strand, within Psest_2938 at 3136.426 kb on - strand, within Psest_2938 at 3136.426 kb on - strand, within Psest_2938 at 3136.426 kb on - strand, within Psest_2938 at 3136.452 kb on + strand, within Psest_2938 at 3136.452 kb on + strand, within Psest_2938 at 3136.452 kb on + strand, within Psest_2938 at 3136.453 kb on - strand, within Psest_2938
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 3,133,706 + Psest_2936 0.27 -0.1 3,133,706 + Psest_2936 0.27 +0.2 3,133,707 - Psest_2936 0.28 -0.4 3,133,891 - Psest_2936 0.43 +0.7 3,133,891 - Psest_2936 0.43 +0.7 3,133,891 - Psest_2936 0.43 -1.2 3,133,891 - Psest_2936 0.43 -0.4 3,133,917 + Psest_2936 0.46 -1.9 3,133,917 + Psest_2936 0.46 -2.1 3,133,918 - Psest_2936 0.46 -2.5 3,133,918 - Psest_2936 0.46 +3.8 3,134,103 - Psest_2936 0.62 -1.3 3,134,175 + Psest_2936 0.68 +0.5 3,134,175 + Psest_2936 0.68 +0.9 3,134,176 - Psest_2936 0.68 -1.8 3,134,176 - Psest_2936 0.68 -0.7 3,134,474 - -1.2 3,134,563 - +0.4 3,134,591 + +0.5 3,134,702 + -1.6 3,134,702 + +1.7 3,134,801 + Psest_2937 0.19 -1.5 3,134,801 + Psest_2937 0.19 -1.1 3,134,802 - Psest_2937 0.19 -0.2 3,134,802 - Psest_2937 0.19 -0.5 3,135,008 + Psest_2937 0.45 +0.4 3,135,009 - Psest_2937 0.45 -0.3 3,135,269 + Psest_2937 0.77 -1.7 3,135,269 + Psest_2937 0.77 -2.3 3,135,270 - Psest_2937 0.77 -0.6 3,135,270 - Psest_2937 0.77 -0.1 3,135,450 + -0.6 3,135,598 - -0.3 3,135,620 - -0.1 3,135,682 + -0.6 3,135,682 + +1.4 3,135,683 - +0.0 3,135,683 - +1.2 3,135,683 - -0.0 3,135,683 - -0.5 3,135,683 - -1.5 3,135,683 - -0.4 3,135,689 - -0.6 3,135,861 + -1.2 3,135,993 + Psest_2938 0.18 +2.0 3,135,993 + Psest_2938 0.18 +0.5 3,135,993 + Psest_2938 0.18 -0.2 3,135,993 + Psest_2938 0.18 -0.1 3,135,993 + Psest_2938 0.18 -0.7 3,135,994 - Psest_2938 0.18 -0.6 3,135,994 - Psest_2938 0.18 +0.7 3,136,188 + Psest_2938 0.30 +3.5 3,136,188 + Psest_2938 0.30 +0.4 3,136,189 - Psest_2938 0.30 -0.7 3,136,189 - Psest_2938 0.30 +0.8 3,136,189 - Psest_2938 0.30 +0.4 3,136,189 - Psest_2938 0.30 +0.2 3,136,189 - Psest_2938 0.30 +1.8 3,136,411 + Psest_2938 0.43 +0.7 3,136,412 - Psest_2938 0.43 +0.8 3,136,424 - Psest_2938 0.44 -1.1 3,136,425 + Psest_2938 0.44 -1.1 3,136,425 + Psest_2938 0.44 -1.4 3,136,425 + Psest_2938 0.44 -1.5 3,136,425 + Psest_2938 0.44 +1.5 3,136,425 + Psest_2938 0.44 -0.0 3,136,425 + Psest_2938 0.44 +0.2 3,136,425 + Psest_2938 0.44 +0.0 3,136,425 + Psest_2938 0.44 +0.1 3,136,425 + Psest_2938 0.44 -0.9 3,136,425 + Psest_2938 0.44 -0.4 3,136,426 - Psest_2938 0.44 +0.1 3,136,426 - Psest_2938 0.44 +0.2 3,136,426 - Psest_2938 0.44 +1.2 3,136,426 - Psest_2938 0.44 +1.5 3,136,426 - Psest_2938 0.44 +1.3 3,136,426 - Psest_2938 0.44 +0.2 3,136,426 - Psest_2938 0.44 -0.1 3,136,426 - Psest_2938 0.44 +0.4 3,136,426 - Psest_2938 0.44 -0.3 3,136,426 - Psest_2938 0.44 -1.1 3,136,452 + Psest_2938 0.46 +1.0 3,136,452 + Psest_2938 0.46 +0.1 3,136,452 + Psest_2938 0.46 +0.5 3,136,453 - Psest_2938 0.46 -0.5
Or see this region's nucleotide sequence