Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2655 and Psest_2656 are separated by 86 nucleotides Psest_2656 and Psest_2657 are separated by 183 nucleotides
Psest_2655: Psest_2655 - Protease II, at 2,839,237 to 2,841,267
_2655
Psest_2656: Psest_2656 - Protein of unknown function (DUF2892)., at 2,841,354 to 2,841,713
_2656
Psest_2657: Psest_2657 - acetate--CoA ligase, at 2,841,897 to 2,843,852
_2657
Position (kb)
2841
2842
2843
2844 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 2840.909 kb on + strand, within Psest_2655 at 2840.909 kb on + strand, within Psest_2655 at 2840.910 kb on - strand, within Psest_2655 at 2840.910 kb on - strand, within Psest_2655 at 2840.910 kb on - strand, within Psest_2655 at 2840.956 kb on + strand, within Psest_2655 at 2841.043 kb on + strand, within Psest_2655 at 2841.071 kb on - strand at 2841.328 kb on + strand at 2841.711 kb on + strand at 2841.712 kb on - strand at 2841.799 kb on - strand at 2841.804 kb on + strand at 2841.986 kb on - strand at 2841.986 kb on - strand at 2842.168 kb on + strand, within Psest_2657 at 2842.168 kb on + strand, within Psest_2657 at 2842.169 kb on - strand, within Psest_2657 at 2842.169 kb on - strand, within Psest_2657 at 2842.169 kb on - strand, within Psest_2657 at 2842.174 kb on + strand, within Psest_2657 at 2842.174 kb on + strand, within Psest_2657 at 2842.174 kb on + strand, within Psest_2657 at 2842.175 kb on - strand, within Psest_2657 at 2842.324 kb on + strand, within Psest_2657 at 2842.366 kb on + strand, within Psest_2657 at 2842.366 kb on + strand, within Psest_2657 at 2842.366 kb on + strand, within Psest_2657 at 2842.366 kb on + strand, within Psest_2657 at 2842.366 kb on + strand, within Psest_2657 at 2842.366 kb on + strand, within Psest_2657 at 2842.366 kb on + strand, within Psest_2657 at 2842.366 kb on + strand, within Psest_2657 at 2842.366 kb on + strand, within Psest_2657 at 2842.366 kb on + strand, within Psest_2657 at 2842.367 kb on - strand, within Psest_2657 at 2842.367 kb on - strand, within Psest_2657 at 2842.367 kb on - strand, within Psest_2657 at 2842.367 kb on - strand, within Psest_2657 at 2842.367 kb on - strand, within Psest_2657 at 2842.367 kb on - strand, within Psest_2657 at 2842.367 kb on - strand, within Psest_2657 at 2842.367 kb on - strand, within Psest_2657 at 2842.367 kb on - strand, within Psest_2657 at 2842.390 kb on + strand, within Psest_2657 at 2842.390 kb on + strand, within Psest_2657 at 2842.390 kb on + strand, within Psest_2657 at 2842.390 kb on + strand, within Psest_2657 at 2842.390 kb on + strand, within Psest_2657 at 2842.390 kb on + strand, within Psest_2657 at 2842.461 kb on + strand, within Psest_2657 at 2842.462 kb on - strand, within Psest_2657 at 2842.657 kb on + strand, within Psest_2657 at 2842.660 kb on + strand, within Psest_2657 at 2842.660 kb on + strand, within Psest_2657 at 2842.789 kb on + strand, within Psest_2657 at 2842.789 kb on + strand, within Psest_2657 at 2842.847 kb on - strand, within Psest_2657 at 2842.864 kb on + strand, within Psest_2657 at 2842.864 kb on + strand, within Psest_2657 at 2842.864 kb on + strand, within Psest_2657 at 2842.865 kb on - strand, within Psest_2657 at 2842.865 kb on - strand, within Psest_2657 at 2842.865 kb on - strand, within Psest_2657 at 2842.865 kb on - strand, within Psest_2657 at 2842.900 kb on + strand, within Psest_2657 at 2842.900 kb on + strand, within Psest_2657 at 2842.901 kb on - strand, within Psest_2657 at 2842.909 kb on + strand, within Psest_2657 at 2842.909 kb on + strand, within Psest_2657 at 2842.910 kb on - strand, within Psest_2657 at 2842.910 kb on - strand, within Psest_2657 at 2842.910 kb on - strand, within Psest_2657 at 2842.910 kb on - strand, within Psest_2657 at 2842.910 kb on - strand, within Psest_2657 at 2842.913 kb on + strand, within Psest_2657 at 2842.913 kb on + strand, within Psest_2657 at 2842.913 kb on + strand, within Psest_2657 at 2842.913 kb on + strand, within Psest_2657 at 2842.913 kb on + strand, within Psest_2657 at 2842.913 kb on + strand, within Psest_2657 at 2842.913 kb on + strand, within Psest_2657 at 2842.914 kb on - strand, within Psest_2657 at 2842.914 kb on - strand, within Psest_2657 at 2842.914 kb on - strand, within Psest_2657 at 2842.914 kb on - strand, within Psest_2657 at 2842.951 kb on + strand, within Psest_2657 at 2843.002 kb on + strand, within Psest_2657 at 2843.003 kb on - strand, within Psest_2657 at 2843.066 kb on - strand, within Psest_2657 at 2843.066 kb on - strand, within Psest_2657 at 2843.143 kb on + strand, within Psest_2657 at 2843.144 kb on - strand, within Psest_2657 at 2843.201 kb on + strand, within Psest_2657 at 2843.440 kb on + strand, within Psest_2657 at 2843.440 kb on + strand, within Psest_2657 at 2843.440 kb on + strand, within Psest_2657 at 2843.440 kb on + strand, within Psest_2657 at 2843.440 kb on + strand, within Psest_2657 at 2843.440 kb on + strand, within Psest_2657 at 2843.440 kb on + strand, within Psest_2657 at 2843.440 kb on + strand, within Psest_2657 at 2843.440 kb on + strand, within Psest_2657 at 2843.440 kb on + strand, within Psest_2657 at 2843.441 kb on - strand, within Psest_2657 at 2843.441 kb on - strand, within Psest_2657 at 2843.441 kb on - strand, within Psest_2657 at 2843.441 kb on - strand, within Psest_2657 at 2843.441 kb on - strand, within Psest_2657 at 2843.441 kb on - strand, within Psest_2657 at 2843.441 kb on - strand, within Psest_2657 at 2843.441 kb on - strand, within Psest_2657 at 2843.466 kb on + strand, within Psest_2657 at 2843.466 kb on + strand, within Psest_2657 at 2843.466 kb on + strand, within Psest_2657 at 2843.466 kb on + strand, within Psest_2657 at 2843.466 kb on + strand, within Psest_2657 at 2843.466 kb on + strand, within Psest_2657 at 2843.466 kb on + strand, within Psest_2657 at 2843.466 kb on + strand, within Psest_2657 at 2843.466 kb on + strand, within Psest_2657 at 2843.466 kb on + strand, within Psest_2657 at 2843.467 kb on - strand, within Psest_2657 at 2843.524 kb on + strand, within Psest_2657 at 2843.525 kb on - strand, within Psest_2657 at 2843.525 kb on - strand, within Psest_2657 at 2843.525 kb on - strand, within Psest_2657 at 2843.525 kb on - strand, within Psest_2657 at 2843.770 kb on + strand at 2843.770 kb on + strand at 2843.770 kb on + strand at 2843.771 kb on - strand at 2843.771 kb on - strand at 2843.771 kb on - strand at 2843.771 kb on - strand at 2844.031 kb on + strand at 2844.031 kb on + strand at 2844.031 kb on + strand at 2844.031 kb on + strand at 2844.031 kb on + strand at 2844.032 kb on - strand at 2844.032 kb on - strand at 2844.032 kb on - strand at 2844.032 kb on - strand at 2844.124 kb on + strand at 2844.124 kb on + strand at 2844.163 kb on - strand at 2844.172 kb on + strand at 2844.184 kb on + strand at 2844.184 kb on + strand at 2844.184 kb on + strand at 2844.184 kb on + strand at 2844.184 kb on + strand at 2844.184 kb on + strand at 2844.184 kb on + strand at 2844.185 kb on - strand at 2844.185 kb on - strand at 2844.185 kb on - strand at 2844.320 kb on + strand at 2844.320 kb on + strand at 2844.345 kb on - strand at 2844.345 kb on - strand at 2844.693 kb on + strand at 2844.710 kb on + strand at 2844.710 kb on + strand at 2844.711 kb on - strand at 2844.739 kb on + strand at 2844.739 kb on + strand at 2844.743 kb on + strand at 2844.743 kb on + strand at 2844.743 kb on + strand at 2844.743 kb on + strand at 2844.743 kb on + strand at 2844.743 kb on + strand at 2844.743 kb on + strand at 2844.744 kb on - strand at 2844.744 kb on - strand at 2844.744 kb on - strand at 2844.744 kb on - strand at 2844.744 kb on - strand at 2844.744 kb on - strand at 2844.744 kb on - strand at 2844.761 kb on + strand at 2844.762 kb on - strand at 2844.773 kb on + strand at 2844.773 kb on + strand at 2844.773 kb on + strand at 2844.773 kb on + strand at 2844.773 kb on + strand at 2844.773 kb on + strand at 2844.773 kb on + strand at 2844.773 kb on + strand at 2844.774 kb on - strand at 2844.774 kb on - strand at 2844.774 kb on - strand at 2844.774 kb on - strand at 2844.774 kb on - strand at 2844.830 kb on + strand at 2844.830 kb on + strand at 2844.830 kb on + strand at 2844.830 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 2,840,909 + Psest_2655 0.82 -1.8 2,840,909 + Psest_2655 0.82 -0.8 2,840,910 - Psest_2655 0.82 +1.4 2,840,910 - Psest_2655 0.82 +1.0 2,840,910 - Psest_2655 0.82 +0.8 2,840,956 + Psest_2655 0.85 -0.2 2,841,043 + Psest_2655 0.89 +1.3 2,841,071 - -0.2 2,841,328 + +1.2 2,841,711 + +1.8 2,841,712 - +0.3 2,841,799 - +0.3 2,841,804 + -1.3 2,841,986 - +3.5 2,841,986 - +1.2 2,842,168 + Psest_2657 0.14 +0.8 2,842,168 + Psest_2657 0.14 -0.4 2,842,169 - Psest_2657 0.14 +0.5 2,842,169 - Psest_2657 0.14 -2.9 2,842,169 - Psest_2657 0.14 +1.5 2,842,174 + Psest_2657 0.14 +1.8 2,842,174 + Psest_2657 0.14 -1.1 2,842,174 + Psest_2657 0.14 -4.2 2,842,175 - Psest_2657 0.14 +0.9 2,842,324 + Psest_2657 0.22 -2.7 2,842,366 + Psest_2657 0.24 +0.6 2,842,366 + Psest_2657 0.24 -0.3 2,842,366 + Psest_2657 0.24 +1.0 2,842,366 + Psest_2657 0.24 +1.8 2,842,366 + Psest_2657 0.24 -0.5 2,842,366 + Psest_2657 0.24 +0.1 2,842,366 + Psest_2657 0.24 -2.2 2,842,366 + Psest_2657 0.24 +1.0 2,842,366 + Psest_2657 0.24 -0.2 2,842,366 + Psest_2657 0.24 +0.5 2,842,367 - Psest_2657 0.24 -0.6 2,842,367 - Psest_2657 0.24 +1.3 2,842,367 - Psest_2657 0.24 -0.4 2,842,367 - Psest_2657 0.24 -0.7 2,842,367 - Psest_2657 0.24 -0.5 2,842,367 - Psest_2657 0.24 -1.3 2,842,367 - Psest_2657 0.24 -0.7 2,842,367 - Psest_2657 0.24 -1.7 2,842,367 - Psest_2657 0.24 -0.2 2,842,390 + Psest_2657 0.25 -0.0 2,842,390 + Psest_2657 0.25 +0.4 2,842,390 + Psest_2657 0.25 +0.8 2,842,390 + Psest_2657 0.25 +0.8 2,842,390 + Psest_2657 0.25 -1.3 2,842,390 + Psest_2657 0.25 -2.5 2,842,461 + Psest_2657 0.29 +0.4 2,842,462 - Psest_2657 0.29 +0.4 2,842,657 + Psest_2657 0.39 -1.8 2,842,660 + Psest_2657 0.39 -2.3 2,842,660 + Psest_2657 0.39 -0.6 2,842,789 + Psest_2657 0.46 -2.2 2,842,789 + Psest_2657 0.46 +0.1 2,842,847 - Psest_2657 0.49 +1.1 2,842,864 + Psest_2657 0.49 +0.5 2,842,864 + Psest_2657 0.49 -1.7 2,842,864 + Psest_2657 0.49 -0.7 2,842,865 - Psest_2657 0.49 -0.7 2,842,865 - Psest_2657 0.49 -0.3 2,842,865 - Psest_2657 0.49 +0.2 2,842,865 - Psest_2657 0.49 -2.1 2,842,900 + Psest_2657 0.51 +1.0 2,842,900 + Psest_2657 0.51 -1.8 2,842,901 - Psest_2657 0.51 -2.1 2,842,909 + Psest_2657 0.52 +0.7 2,842,909 + Psest_2657 0.52 -0.2 2,842,910 - Psest_2657 0.52 -0.6 2,842,910 - Psest_2657 0.52 -0.8 2,842,910 - Psest_2657 0.52 -0.2 2,842,910 - Psest_2657 0.52 -1.2 2,842,910 - Psest_2657 0.52 +1.1 2,842,913 + Psest_2657 0.52 -2.0 2,842,913 + Psest_2657 0.52 +0.2 2,842,913 + Psest_2657 0.52 -2.2 2,842,913 + Psest_2657 0.52 +0.2 2,842,913 + Psest_2657 0.52 +1.5 2,842,913 + Psest_2657 0.52 +2.4 2,842,913 + Psest_2657 0.52 +2.5 2,842,914 - Psest_2657 0.52 +1.3 2,842,914 - Psest_2657 0.52 -0.2 2,842,914 - Psest_2657 0.52 -0.8 2,842,914 - Psest_2657 0.52 +0.8 2,842,951 + Psest_2657 0.54 -1.9 2,843,002 + Psest_2657 0.56 -0.2 2,843,003 - Psest_2657 0.57 -2.1 2,843,066 - Psest_2657 0.60 +0.5 2,843,066 - Psest_2657 0.60 -0.2 2,843,143 + Psest_2657 0.64 -0.5 2,843,144 - Psest_2657 0.64 +1.3 2,843,201 + Psest_2657 0.67 -0.5 2,843,440 + Psest_2657 0.79 -1.2 2,843,440 + Psest_2657 0.79 +2.0 2,843,440 + Psest_2657 0.79 +0.5 2,843,440 + Psest_2657 0.79 -1.7 2,843,440 + Psest_2657 0.79 +0.1 2,843,440 + Psest_2657 0.79 -0.2 2,843,440 + Psest_2657 0.79 -1.6 2,843,440 + Psest_2657 0.79 -2.6 2,843,440 + Psest_2657 0.79 -1.6 2,843,440 + Psest_2657 0.79 +1.9 2,843,441 - Psest_2657 0.79 +0.6 2,843,441 - Psest_2657 0.79 +1.0 2,843,441 - Psest_2657 0.79 +0.8 2,843,441 - Psest_2657 0.79 -0.8 2,843,441 - Psest_2657 0.79 -1.4 2,843,441 - Psest_2657 0.79 -0.9 2,843,441 - Psest_2657 0.79 +0.1 2,843,441 - Psest_2657 0.79 -1.7 2,843,466 + Psest_2657 0.80 +0.0 2,843,466 + Psest_2657 0.80 -0.7 2,843,466 + Psest_2657 0.80 +1.5 2,843,466 + Psest_2657 0.80 +0.3 2,843,466 + Psest_2657 0.80 -0.1 2,843,466 + Psest_2657 0.80 +2.4 2,843,466 + Psest_2657 0.80 -1.4 2,843,466 + Psest_2657 0.80 -0.9 2,843,466 + Psest_2657 0.80 +0.3 2,843,466 + Psest_2657 0.80 +1.5 2,843,467 - Psest_2657 0.80 -1.1 2,843,524 + Psest_2657 0.83 -0.1 2,843,525 - Psest_2657 0.83 +0.2 2,843,525 - Psest_2657 0.83 +0.4 2,843,525 - Psest_2657 0.83 +0.8 2,843,525 - Psest_2657 0.83 -0.1 2,843,770 + -0.9 2,843,770 + -0.2 2,843,770 + -2.5 2,843,771 - -1.5 2,843,771 - +0.0 2,843,771 - -2.8 2,843,771 - -0.7 2,844,031 + +0.3 2,844,031 + +0.5 2,844,031 + -0.1 2,844,031 + -0.6 2,844,031 + +0.3 2,844,032 - +2.1 2,844,032 - -0.9 2,844,032 - +0.7 2,844,032 - -0.7 2,844,124 + +0.7 2,844,124 + +0.8 2,844,163 - -1.0 2,844,172 + -1.2 2,844,184 + -2.1 2,844,184 + -2.9 2,844,184 + -0.0 2,844,184 + +0.1 2,844,184 + +0.8 2,844,184 + +0.2 2,844,184 + +0.5 2,844,185 - +2.7 2,844,185 - +0.3 2,844,185 - +0.2 2,844,320 + +0.1 2,844,320 + +1.5 2,844,345 - -0.2 2,844,345 - -1.2 2,844,693 + -0.6 2,844,710 + +0.3 2,844,710 + +0.7 2,844,711 - -1.2 2,844,739 + +0.8 2,844,739 + +0.6 2,844,743 + -1.7 2,844,743 + +0.9 2,844,743 + +0.5 2,844,743 + -1.5 2,844,743 + +0.7 2,844,743 + -1.5 2,844,743 + -1.5 2,844,744 - +0.3 2,844,744 - -0.6 2,844,744 - +1.0 2,844,744 - -2.1 2,844,744 - +0.9 2,844,744 - +0.5 2,844,744 - +0.1 2,844,761 + +0.5 2,844,762 - -1.1 2,844,773 + -1.0 2,844,773 + -1.2 2,844,773 + +0.4 2,844,773 + +0.8 2,844,773 + -1.3 2,844,773 + +0.8 2,844,773 + -1.7 2,844,773 + +0.5 2,844,774 - +0.3 2,844,774 - -0.4 2,844,774 - +0.6 2,844,774 - +0.4 2,844,774 - -0.8 2,844,830 + +0.6 2,844,830 + -0.2 2,844,830 + -2.0 2,844,830 + -0.8
Or see this region's nucleotide sequence