Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_2267 and Psest_2268 overlap by 17 nucleotides Psest_2268 and Psest_2269 are separated by 107 nucleotides
Psest_2267: Psest_2267 - PAS domain S-box, at 2,415,447 to 2,417,144
_2267
Psest_2268: Psest_2268 - Alcohol dehydrogenase, class IV, at 2,417,128 to 2,418,291
_2268
Psest_2269: Psest_2269 - Dipeptidyl aminopeptidases/acylaminoacyl-peptidases, at 2,418,399 to 2,420,312
_2269
Position (kb)
2417
2418
2419 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 2416.175 kb on + strand, within Psest_2267 at 2416.339 kb on + strand, within Psest_2267 at 2416.339 kb on + strand, within Psest_2267 at 2416.549 kb on + strand, within Psest_2267 at 2416.549 kb on + strand, within Psest_2267 at 2416.549 kb on + strand, within Psest_2267 at 2416.550 kb on - strand, within Psest_2267 at 2416.550 kb on - strand, within Psest_2267 at 2416.550 kb on - strand, within Psest_2267 at 2416.550 kb on - strand, within Psest_2267 at 2416.550 kb on - strand, within Psest_2267 at 2416.611 kb on - strand, within Psest_2267 at 2416.611 kb on - strand, within Psest_2267 at 2416.684 kb on - strand, within Psest_2267 at 2416.750 kb on + strand, within Psest_2267 at 2416.750 kb on + strand, within Psest_2267 at 2416.750 kb on + strand, within Psest_2267 at 2416.750 kb on + strand, within Psest_2267 at 2416.750 kb on + strand, within Psest_2267 at 2416.750 kb on + strand, within Psest_2267 at 2416.750 kb on + strand, within Psest_2267 at 2416.751 kb on - strand, within Psest_2267 at 2416.751 kb on - strand, within Psest_2267 at 2416.751 kb on - strand, within Psest_2267 at 2416.751 kb on - strand, within Psest_2267 at 2416.820 kb on + strand, within Psest_2267 at 2416.820 kb on + strand, within Psest_2267 at 2416.820 kb on + strand, within Psest_2267 at 2416.820 kb on + strand, within Psest_2267 at 2416.821 kb on - strand, within Psest_2267 at 2416.821 kb on - strand, within Psest_2267 at 2417.100 kb on + strand at 2417.100 kb on + strand at 2417.402 kb on + strand, within Psest_2268 at 2417.402 kb on + strand, within Psest_2268 at 2417.402 kb on + strand, within Psest_2268 at 2417.403 kb on - strand, within Psest_2268 at 2417.764 kb on + strand, within Psest_2268 at 2417.764 kb on + strand, within Psest_2268 at 2417.928 kb on - strand, within Psest_2268 at 2418.178 kb on + strand at 2418.179 kb on - strand at 2418.179 kb on - strand at 2418.179 kb on - strand at 2418.306 kb on + strand at 2418.334 kb on - strand at 2418.334 kb on - strand at 2418.334 kb on - strand at 2418.416 kb on - strand at 2418.488 kb on - strand at 2418.619 kb on + strand, within Psest_2269 at 2418.619 kb on + strand, within Psest_2269 at 2418.619 kb on + strand, within Psest_2269 at 2418.620 kb on - strand, within Psest_2269 at 2418.620 kb on - strand, within Psest_2269 at 2418.620 kb on - strand, within Psest_2269 at 2418.620 kb on - strand, within Psest_2269 at 2418.685 kb on + strand, within Psest_2269 at 2418.686 kb on - strand, within Psest_2269 at 2418.686 kb on - strand, within Psest_2269 at 2418.799 kb on + strand, within Psest_2269 at 2418.799 kb on + strand, within Psest_2269 at 2418.799 kb on + strand, within Psest_2269 at 2418.800 kb on - strand, within Psest_2269 at 2419.027 kb on + strand, within Psest_2269 at 2419.079 kb on + strand, within Psest_2269 at 2419.080 kb on - strand, within Psest_2269
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 2,416,175 + Psest_2267 0.43 -0.7 2,416,339 + Psest_2267 0.53 +0.6 2,416,339 + Psest_2267 0.53 -0.4 2,416,549 + Psest_2267 0.65 +0.8 2,416,549 + Psest_2267 0.65 +0.2 2,416,549 + Psest_2267 0.65 -0.1 2,416,550 - Psest_2267 0.65 +0.8 2,416,550 - Psest_2267 0.65 -0.7 2,416,550 - Psest_2267 0.65 +1.5 2,416,550 - Psest_2267 0.65 -0.2 2,416,550 - Psest_2267 0.65 -0.9 2,416,611 - Psest_2267 0.69 -0.8 2,416,611 - Psest_2267 0.69 -0.7 2,416,684 - Psest_2267 0.73 -3.2 2,416,750 + Psest_2267 0.77 -1.3 2,416,750 + Psest_2267 0.77 +0.1 2,416,750 + Psest_2267 0.77 +2.0 2,416,750 + Psest_2267 0.77 -0.1 2,416,750 + Psest_2267 0.77 +3.4 2,416,750 + Psest_2267 0.77 -0.4 2,416,750 + Psest_2267 0.77 -0.8 2,416,751 - Psest_2267 0.77 -0.6 2,416,751 - Psest_2267 0.77 +0.4 2,416,751 - Psest_2267 0.77 -0.6 2,416,751 - Psest_2267 0.77 -0.6 2,416,820 + Psest_2267 0.81 -0.0 2,416,820 + Psest_2267 0.81 +0.8 2,416,820 + Psest_2267 0.81 -0.8 2,416,820 + Psest_2267 0.81 +1.6 2,416,821 - Psest_2267 0.81 -0.2 2,416,821 - Psest_2267 0.81 +1.1 2,417,100 + +0.3 2,417,100 + +0.0 2,417,402 + Psest_2268 0.24 +1.7 2,417,402 + Psest_2268 0.24 +2.5 2,417,402 + Psest_2268 0.24 +0.2 2,417,403 - Psest_2268 0.24 +1.2 2,417,764 + Psest_2268 0.55 -1.7 2,417,764 + Psest_2268 0.55 -2.4 2,417,928 - Psest_2268 0.69 +0.2 2,418,178 + -0.6 2,418,179 - +0.7 2,418,179 - +0.5 2,418,179 - +0.5 2,418,306 + +0.7 2,418,334 - -2.9 2,418,334 - -1.1 2,418,334 - -1.6 2,418,416 - -4.1 2,418,488 - -1.8 2,418,619 + Psest_2269 0.11 -1.1 2,418,619 + Psest_2269 0.11 +1.6 2,418,619 + Psest_2269 0.11 -0.3 2,418,620 - Psest_2269 0.12 -1.1 2,418,620 - Psest_2269 0.12 -2.4 2,418,620 - Psest_2269 0.12 -2.8 2,418,620 - Psest_2269 0.12 -3.2 2,418,685 + Psest_2269 0.15 +0.7 2,418,686 - Psest_2269 0.15 -3.3 2,418,686 - Psest_2269 0.15 -3.0 2,418,799 + Psest_2269 0.21 -1.4 2,418,799 + Psest_2269 0.21 +2.4 2,418,799 + Psest_2269 0.21 +1.2 2,418,800 - Psest_2269 0.21 -1.3 2,419,027 + Psest_2269 0.33 +1.0 2,419,079 + Psest_2269 0.36 +2.5 2,419,080 - Psest_2269 0.36 -1.6
Or see this region's nucleotide sequence