Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1701 and Psest_1702 are separated by 120 nucleotides Psest_1702 and Psest_1703 are separated by 53 nucleotides Psest_1703 and Psest_1704 are separated by 63 nucleotides
Psest_1701: Psest_1701 - Fe-S oxidoreductase, at 1,807,283 to 1,808,179
_1701
Psest_1702: Psest_1702 - hypothetical protein, at 1,808,300 to 1,808,911
_1702
Psest_1703: Psest_1703 - Uncharacterized protein conserved in bacteria, at 1,808,965 to 1,809,531
_1703
Psest_1704: Psest_1704 - Dehydrogenases (flavoproteins), at 1,809,595 to 1,811,250
_1704
Position (kb)
1808
1809
1810 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1808.060 kb on + strand, within Psest_1701 at 1808.060 kb on + strand, within Psest_1701 at 1808.060 kb on + strand, within Psest_1701 at 1808.060 kb on + strand, within Psest_1701 at 1808.061 kb on - strand, within Psest_1701 at 1808.061 kb on - strand, within Psest_1701 at 1808.061 kb on - strand, within Psest_1701 at 1808.061 kb on - strand, within Psest_1701 at 1808.474 kb on + strand, within Psest_1702 at 1808.474 kb on + strand, within Psest_1702 at 1808.474 kb on + strand, within Psest_1702 at 1808.474 kb on + strand, within Psest_1702 at 1808.474 kb on + strand, within Psest_1702 at 1808.474 kb on + strand, within Psest_1702 at 1808.474 kb on + strand, within Psest_1702 at 1808.474 kb on + strand, within Psest_1702 at 1808.474 kb on + strand, within Psest_1702 at 1808.474 kb on + strand, within Psest_1702 at 1808.475 kb on - strand, within Psest_1702 at 1808.475 kb on - strand, within Psest_1702 at 1808.475 kb on - strand, within Psest_1702 at 1808.513 kb on + strand, within Psest_1702 at 1808.514 kb on - strand, within Psest_1702 at 1808.565 kb on - strand, within Psest_1702 at 1808.646 kb on - strand, within Psest_1702 at 1808.654 kb on + strand, within Psest_1702 at 1808.655 kb on - strand, within Psest_1702 at 1808.751 kb on + strand, within Psest_1702 at 1808.751 kb on + strand, within Psest_1702 at 1808.752 kb on - strand, within Psest_1702 at 1808.752 kb on - strand, within Psest_1702 at 1808.834 kb on + strand, within Psest_1702 at 1808.834 kb on + strand, within Psest_1702 at 1808.834 kb on + strand, within Psest_1702 at 1808.834 kb on + strand, within Psest_1702 at 1808.835 kb on - strand, within Psest_1702 at 1808.835 kb on - strand, within Psest_1702 at 1808.879 kb on + strand at 1808.879 kb on + strand at 1808.879 kb on + strand at 1808.879 kb on + strand at 1808.879 kb on + strand at 1808.879 kb on + strand at 1808.880 kb on - strand at 1808.973 kb on + strand at 1808.993 kb on + strand at 1808.994 kb on - strand at 1808.994 kb on - strand at 1809.039 kb on - strand, within Psest_1703 at 1809.044 kb on + strand, within Psest_1703 at 1809.044 kb on + strand, within Psest_1703 at 1809.044 kb on + strand, within Psest_1703 at 1809.044 kb on + strand, within Psest_1703 at 1809.044 kb on + strand, within Psest_1703 at 1809.044 kb on + strand, within Psest_1703 at 1809.044 kb on + strand, within Psest_1703 at 1809.045 kb on - strand, within Psest_1703 at 1809.103 kb on + strand, within Psest_1703 at 1809.107 kb on - strand, within Psest_1703 at 1809.181 kb on + strand, within Psest_1703 at 1809.181 kb on + strand, within Psest_1703 at 1809.181 kb on + strand, within Psest_1703 at 1809.181 kb on + strand, within Psest_1703 at 1809.182 kb on - strand, within Psest_1703 at 1809.294 kb on + strand, within Psest_1703 at 1809.379 kb on + strand, within Psest_1703 at 1809.379 kb on + strand, within Psest_1703 at 1809.380 kb on - strand, within Psest_1703 at 1809.380 kb on - strand, within Psest_1703 at 1809.430 kb on + strand, within Psest_1703 at 1809.430 kb on + strand, within Psest_1703 at 1809.430 kb on + strand, within Psest_1703 at 1809.430 kb on + strand, within Psest_1703 at 1809.430 kb on + strand, within Psest_1703 at 1809.431 kb on - strand, within Psest_1703 at 1809.431 kb on - strand, within Psest_1703 at 1809.431 kb on - strand, within Psest_1703 at 1809.431 kb on - strand, within Psest_1703 at 1809.431 kb on - strand, within Psest_1703 at 1809.529 kb on + strand at 1809.596 kb on + strand at 1809.596 kb on + strand at 1809.596 kb on + strand at 1809.596 kb on + strand at 1809.596 kb on + strand at 1809.596 kb on + strand at 1809.597 kb on - strand at 1809.597 kb on - strand at 1809.597 kb on - strand at 1809.597 kb on - strand at 1809.597 kb on - strand at 1809.597 kb on - strand at 1809.597 kb on - strand at 1809.597 kb on - strand at 1809.597 kb on - strand at 1809.597 kb on - strand at 1809.597 kb on - strand at 1809.597 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 1,808,060 + Psest_1701 0.87 -1.2 1,808,060 + Psest_1701 0.87 +0.4 1,808,060 + Psest_1701 0.87 +0.3 1,808,060 + Psest_1701 0.87 -2.3 1,808,061 - Psest_1701 0.87 -1.4 1,808,061 - Psest_1701 0.87 -0.9 1,808,061 - Psest_1701 0.87 +1.0 1,808,061 - Psest_1701 0.87 -0.9 1,808,474 + Psest_1702 0.28 -0.2 1,808,474 + Psest_1702 0.28 -0.5 1,808,474 + Psest_1702 0.28 -2.8 1,808,474 + Psest_1702 0.28 +0.4 1,808,474 + Psest_1702 0.28 -2.2 1,808,474 + Psest_1702 0.28 +0.4 1,808,474 + Psest_1702 0.28 -0.2 1,808,474 + Psest_1702 0.28 -0.2 1,808,474 + Psest_1702 0.28 -0.2 1,808,474 + Psest_1702 0.28 -1.4 1,808,475 - Psest_1702 0.29 +0.4 1,808,475 - Psest_1702 0.29 -0.3 1,808,475 - Psest_1702 0.29 -3.2 1,808,513 + Psest_1702 0.35 -1.2 1,808,514 - Psest_1702 0.35 -0.5 1,808,565 - Psest_1702 0.43 -0.8 1,808,646 - Psest_1702 0.57 +0.1 1,808,654 + Psest_1702 0.58 -2.6 1,808,655 - Psest_1702 0.58 -0.5 1,808,751 + Psest_1702 0.74 -0.8 1,808,751 + Psest_1702 0.74 -0.1 1,808,752 - Psest_1702 0.74 -0.2 1,808,752 - Psest_1702 0.74 -1.9 1,808,834 + Psest_1702 0.87 -2.7 1,808,834 + Psest_1702 0.87 +1.4 1,808,834 + Psest_1702 0.87 +2.8 1,808,834 + Psest_1702 0.87 +0.6 1,808,835 - Psest_1702 0.87 -0.8 1,808,835 - Psest_1702 0.87 -0.9 1,808,879 + -2.0 1,808,879 + +2.6 1,808,879 + -0.1 1,808,879 + +0.1 1,808,879 + +0.9 1,808,879 + -0.0 1,808,880 - -1.6 1,808,973 + -1.4 1,808,993 + -1.2 1,808,994 - -0.7 1,808,994 - +1.2 1,809,039 - Psest_1703 0.13 -0.2 1,809,044 + Psest_1703 0.14 -1.0 1,809,044 + Psest_1703 0.14 -0.2 1,809,044 + Psest_1703 0.14 -0.2 1,809,044 + Psest_1703 0.14 -1.2 1,809,044 + Psest_1703 0.14 +0.5 1,809,044 + Psest_1703 0.14 -0.1 1,809,044 + Psest_1703 0.14 +0.2 1,809,045 - Psest_1703 0.14 +3.5 1,809,103 + Psest_1703 0.24 +1.1 1,809,107 - Psest_1703 0.25 +0.4 1,809,181 + Psest_1703 0.38 +3.0 1,809,181 + Psest_1703 0.38 -0.6 1,809,181 + Psest_1703 0.38 +0.7 1,809,181 + Psest_1703 0.38 +0.2 1,809,182 - Psest_1703 0.38 +0.4 1,809,294 + Psest_1703 0.58 +0.1 1,809,379 + Psest_1703 0.73 +0.5 1,809,379 + Psest_1703 0.73 +0.2 1,809,380 - Psest_1703 0.73 +0.0 1,809,380 - Psest_1703 0.73 -0.4 1,809,430 + Psest_1703 0.82 +1.1 1,809,430 + Psest_1703 0.82 -1.4 1,809,430 + Psest_1703 0.82 +0.3 1,809,430 + Psest_1703 0.82 -0.6 1,809,430 + Psest_1703 0.82 -0.7 1,809,431 - Psest_1703 0.82 -0.3 1,809,431 - Psest_1703 0.82 +1.4 1,809,431 - Psest_1703 0.82 +0.7 1,809,431 - Psest_1703 0.82 -1.9 1,809,431 - Psest_1703 0.82 +0.8 1,809,529 + -2.0 1,809,596 + -0.5 1,809,596 + +0.6 1,809,596 + +3.0 1,809,596 + +1.8 1,809,596 + -2.3 1,809,596 + -0.6 1,809,597 - -0.6 1,809,597 - -0.4 1,809,597 - -0.5 1,809,597 - +0.5 1,809,597 - +3.7 1,809,597 - -1.0 1,809,597 - -1.2 1,809,597 - +0.4 1,809,597 - +0.7 1,809,597 - +1.7 1,809,597 - -1.6 1,809,597 - -1.0
Or see this region's nucleotide sequence