Experiment: Bacitracin 0.25 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_1699 and Psest_1700 are separated by 75 nucleotides Psest_1700 and Psest_1701 are separated by 31 nucleotides Psest_1701 and Psest_1702 are separated by 120 nucleotides Psest_1702 and Psest_1703 are separated by 53 nucleotides
Psest_1699: Psest_1699 - Selenocysteine lyase, at 1,805,422 to 1,806,555
_1699
Psest_1700: Psest_1700 - Transcriptional regulator, at 1,806,631 to 1,807,251
_1700
Psest_1701: Psest_1701 - Fe-S oxidoreductase, at 1,807,283 to 1,808,179
_1701
Psest_1702: Psest_1702 - hypothetical protein, at 1,808,300 to 1,808,911
_1702
Psest_1703: Psest_1703 - Uncharacterized protein conserved in bacteria, at 1,808,965 to 1,809,531
_1703
Position (kb)
1807
1808
1809 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1806.394 kb on + strand, within Psest_1699 at 1806.394 kb on + strand, within Psest_1699 at 1806.395 kb on - strand, within Psest_1699 at 1806.395 kb on - strand, within Psest_1699 at 1806.524 kb on - strand at 1806.544 kb on + strand at 1806.587 kb on + strand at 1806.781 kb on + strand, within Psest_1700 at 1806.781 kb on + strand, within Psest_1700 at 1806.782 kb on - strand, within Psest_1700 at 1806.782 kb on - strand, within Psest_1700 at 1806.811 kb on + strand, within Psest_1700 at 1806.811 kb on + strand, within Psest_1700 at 1806.904 kb on + strand, within Psest_1700 at 1806.904 kb on + strand, within Psest_1700 at 1806.904 kb on + strand, within Psest_1700 at 1807.096 kb on + strand, within Psest_1700 at 1807.310 kb on + strand at 1807.310 kb on + strand at 1807.310 kb on + strand at 1807.314 kb on + strand at 1807.314 kb on + strand at 1807.314 kb on + strand at 1807.315 kb on - strand at 1807.315 kb on - strand at 1807.315 kb on - strand at 1807.409 kb on + strand, within Psest_1701 at 1807.409 kb on + strand, within Psest_1701 at 1807.409 kb on + strand, within Psest_1701 at 1807.409 kb on + strand, within Psest_1701 at 1807.409 kb on + strand, within Psest_1701 at 1807.409 kb on + strand, within Psest_1701 at 1807.409 kb on + strand, within Psest_1701 at 1807.409 kb on + strand, within Psest_1701 at 1807.409 kb on + strand, within Psest_1701 at 1807.410 kb on - strand, within Psest_1701 at 1807.410 kb on - strand, within Psest_1701 at 1807.410 kb on - strand, within Psest_1701 at 1807.410 kb on - strand, within Psest_1701 at 1807.410 kb on - strand, within Psest_1701 at 1807.410 kb on - strand, within Psest_1701 at 1807.410 kb on - strand, within Psest_1701 at 1807.685 kb on + strand, within Psest_1701 at 1807.685 kb on + strand, within Psest_1701 at 1807.685 kb on + strand, within Psest_1701 at 1807.685 kb on + strand, within Psest_1701 at 1807.686 kb on - strand, within Psest_1701 at 1807.686 kb on - strand, within Psest_1701 at 1807.686 kb on - strand, within Psest_1701 at 1807.686 kb on - strand, within Psest_1701 at 1807.771 kb on + strand, within Psest_1701 at 1807.855 kb on + strand, within Psest_1701 at 1807.855 kb on + strand, within Psest_1701 at 1807.855 kb on + strand, within Psest_1701 at 1807.856 kb on - strand, within Psest_1701 at 1808.060 kb on + strand, within Psest_1701 at 1808.060 kb on + strand, within Psest_1701 at 1808.060 kb on + strand, within Psest_1701 at 1808.060 kb on + strand, within Psest_1701 at 1808.061 kb on - strand, within Psest_1701 at 1808.061 kb on - strand, within Psest_1701 at 1808.061 kb on - strand, within Psest_1701 at 1808.061 kb on - strand, within Psest_1701 at 1808.474 kb on + strand, within Psest_1702 at 1808.474 kb on + strand, within Psest_1702 at 1808.474 kb on + strand, within Psest_1702 at 1808.474 kb on + strand, within Psest_1702 at 1808.474 kb on + strand, within Psest_1702 at 1808.474 kb on + strand, within Psest_1702 at 1808.474 kb on + strand, within Psest_1702 at 1808.474 kb on + strand, within Psest_1702 at 1808.474 kb on + strand, within Psest_1702 at 1808.474 kb on + strand, within Psest_1702 at 1808.475 kb on - strand, within Psest_1702 at 1808.475 kb on - strand, within Psest_1702 at 1808.475 kb on - strand, within Psest_1702 at 1808.513 kb on + strand, within Psest_1702 at 1808.514 kb on - strand, within Psest_1702 at 1808.565 kb on - strand, within Psest_1702 at 1808.646 kb on - strand, within Psest_1702 at 1808.654 kb on + strand, within Psest_1702 at 1808.655 kb on - strand, within Psest_1702 at 1808.751 kb on + strand, within Psest_1702 at 1808.751 kb on + strand, within Psest_1702 at 1808.752 kb on - strand, within Psest_1702 at 1808.752 kb on - strand, within Psest_1702 at 1808.834 kb on + strand, within Psest_1702 at 1808.834 kb on + strand, within Psest_1702 at 1808.834 kb on + strand, within Psest_1702 at 1808.834 kb on + strand, within Psest_1702 at 1808.835 kb on - strand, within Psest_1702 at 1808.835 kb on - strand, within Psest_1702 at 1808.879 kb on + strand at 1808.879 kb on + strand at 1808.879 kb on + strand at 1808.879 kb on + strand at 1808.879 kb on + strand at 1808.879 kb on + strand at 1808.880 kb on - strand at 1808.973 kb on + strand at 1808.993 kb on + strand at 1808.994 kb on - strand at 1808.994 kb on - strand at 1809.039 kb on - strand, within Psest_1703 at 1809.044 kb on + strand, within Psest_1703 at 1809.044 kb on + strand, within Psest_1703 at 1809.044 kb on + strand, within Psest_1703 at 1809.044 kb on + strand, within Psest_1703 at 1809.044 kb on + strand, within Psest_1703 at 1809.044 kb on + strand, within Psest_1703 at 1809.044 kb on + strand, within Psest_1703 at 1809.045 kb on - strand, within Psest_1703 at 1809.103 kb on + strand, within Psest_1703 at 1809.107 kb on - strand, within Psest_1703
Per-strain Table
Position Strand Gene LocusTag Fraction Bacitracin 0.25 mg/ml remove 1,806,394 + Psest_1699 0.86 -0.7 1,806,394 + Psest_1699 0.86 -3.1 1,806,395 - Psest_1699 0.86 -0.2 1,806,395 - Psest_1699 0.86 +0.3 1,806,524 - -0.7 1,806,544 + -2.0 1,806,587 + -0.1 1,806,781 + Psest_1700 0.24 -1.2 1,806,781 + Psest_1700 0.24 +0.6 1,806,782 - Psest_1700 0.24 -1.2 1,806,782 - Psest_1700 0.24 +2.2 1,806,811 + Psest_1700 0.29 +0.1 1,806,811 + Psest_1700 0.29 +0.3 1,806,904 + Psest_1700 0.44 +0.1 1,806,904 + Psest_1700 0.44 -0.3 1,806,904 + Psest_1700 0.44 -0.3 1,807,096 + Psest_1700 0.75 -0.3 1,807,310 + -1.2 1,807,310 + +1.0 1,807,310 + +0.4 1,807,314 + -0.9 1,807,314 + -1.9 1,807,314 + +0.3 1,807,315 - -1.7 1,807,315 - +0.2 1,807,315 - +1.8 1,807,409 + Psest_1701 0.14 -1.4 1,807,409 + Psest_1701 0.14 +0.5 1,807,409 + Psest_1701 0.14 -0.7 1,807,409 + Psest_1701 0.14 -0.9 1,807,409 + Psest_1701 0.14 +1.4 1,807,409 + Psest_1701 0.14 +0.3 1,807,409 + Psest_1701 0.14 -0.9 1,807,409 + Psest_1701 0.14 -0.2 1,807,409 + Psest_1701 0.14 -0.7 1,807,410 - Psest_1701 0.14 +0.1 1,807,410 - Psest_1701 0.14 -0.9 1,807,410 - Psest_1701 0.14 -0.4 1,807,410 - Psest_1701 0.14 +0.4 1,807,410 - Psest_1701 0.14 -1.1 1,807,410 - Psest_1701 0.14 +0.1 1,807,410 - Psest_1701 0.14 -1.4 1,807,685 + Psest_1701 0.45 -0.0 1,807,685 + Psest_1701 0.45 -0.4 1,807,685 + Psest_1701 0.45 -1.6 1,807,685 + Psest_1701 0.45 +1.9 1,807,686 - Psest_1701 0.45 +1.0 1,807,686 - Psest_1701 0.45 +0.2 1,807,686 - Psest_1701 0.45 -0.6 1,807,686 - Psest_1701 0.45 +1.1 1,807,771 + Psest_1701 0.54 -0.5 1,807,855 + Psest_1701 0.64 -3.3 1,807,855 + Psest_1701 0.64 +0.6 1,807,855 + Psest_1701 0.64 -0.2 1,807,856 - Psest_1701 0.64 +1.0 1,808,060 + Psest_1701 0.87 -1.2 1,808,060 + Psest_1701 0.87 +0.4 1,808,060 + Psest_1701 0.87 +0.3 1,808,060 + Psest_1701 0.87 -2.3 1,808,061 - Psest_1701 0.87 -1.4 1,808,061 - Psest_1701 0.87 -0.9 1,808,061 - Psest_1701 0.87 +1.0 1,808,061 - Psest_1701 0.87 -0.9 1,808,474 + Psest_1702 0.28 -0.2 1,808,474 + Psest_1702 0.28 -0.5 1,808,474 + Psest_1702 0.28 -2.8 1,808,474 + Psest_1702 0.28 +0.4 1,808,474 + Psest_1702 0.28 -2.2 1,808,474 + Psest_1702 0.28 +0.4 1,808,474 + Psest_1702 0.28 -0.2 1,808,474 + Psest_1702 0.28 -0.2 1,808,474 + Psest_1702 0.28 -0.2 1,808,474 + Psest_1702 0.28 -1.4 1,808,475 - Psest_1702 0.29 +0.4 1,808,475 - Psest_1702 0.29 -0.3 1,808,475 - Psest_1702 0.29 -3.2 1,808,513 + Psest_1702 0.35 -1.2 1,808,514 - Psest_1702 0.35 -0.5 1,808,565 - Psest_1702 0.43 -0.8 1,808,646 - Psest_1702 0.57 +0.1 1,808,654 + Psest_1702 0.58 -2.6 1,808,655 - Psest_1702 0.58 -0.5 1,808,751 + Psest_1702 0.74 -0.8 1,808,751 + Psest_1702 0.74 -0.1 1,808,752 - Psest_1702 0.74 -0.2 1,808,752 - Psest_1702 0.74 -1.9 1,808,834 + Psest_1702 0.87 -2.7 1,808,834 + Psest_1702 0.87 +1.4 1,808,834 + Psest_1702 0.87 +2.8 1,808,834 + Psest_1702 0.87 +0.6 1,808,835 - Psest_1702 0.87 -0.8 1,808,835 - Psest_1702 0.87 -0.9 1,808,879 + -2.0 1,808,879 + +2.6 1,808,879 + -0.1 1,808,879 + +0.1 1,808,879 + +0.9 1,808,879 + -0.0 1,808,880 - -1.6 1,808,973 + -1.4 1,808,993 + -1.2 1,808,994 - -0.7 1,808,994 - +1.2 1,809,039 - Psest_1703 0.13 -0.2 1,809,044 + Psest_1703 0.14 -1.0 1,809,044 + Psest_1703 0.14 -0.2 1,809,044 + Psest_1703 0.14 -0.2 1,809,044 + Psest_1703 0.14 -1.2 1,809,044 + Psest_1703 0.14 +0.5 1,809,044 + Psest_1703 0.14 -0.1 1,809,044 + Psest_1703 0.14 +0.2 1,809,045 - Psest_1703 0.14 +3.5 1,809,103 + Psest_1703 0.24 +1.1 1,809,107 - Psest_1703 0.25 +0.4
Or see this region's nucleotide sequence